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4 protocols using cd24 m1 69

1

Comprehensive Murine Immune Cell Profiling

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Antibodies targeting the following murine proteins were purchased from BioLegend (San Diego, CA): PD-L1 (clone 10F.9G2), I-A/I-E (M5/114.15.2), CD45 (30-F11), CD19 (6D5), CD11b (M1/70), PD-1 (29F.1A12), TCRβ chain (H57-597), CD8a (53-6.7), PD-L2 (TY25), CD80 (16-10A1), CD4 (GK1.5), Ly6G (1A8), Ly6C (HK1.4), T-bet (4B10), ICOS (C398.4A), OX40 (OX-86), TCRγ/δ (GL3) and CD16/32 (clone 93). Antibodies targeting the following murine proteins were purchased from BD Biosciences (Franklin Lake, NJ): Siglec F (E50-2440), CD24 (M1/69), and CD3ε (145-2C11). Antibodies targeting the following murine proteins were purchased from eBioscience (Asheville, NC): iNOS (CXNFT), FoxP3 (FJK-16s), Ki67 (SolA15), CD11c (N418), Gata3 (TWAJ), and RORγt (B2D). A polyclonal antibody targeting murine arginase was purchased from R&D Systems. Isotype control antibodies were used according to manufacturer’s instructions in all experiments. Antibodies were conjugated to the following fluorophores: Allophycocyanin (APC), Alexa Fluor 700, APC-cyanine 7 (APC-Cy7), fluorescein isothiocyanate (FITC), phycoerythrin (PE), peridinin-chlorophyll-protein (PerCP)-Cy5.5, PE-eFluor 610, PE-Cy5, PE-Cy7, Brilliant Violet (BV) 421, and BV 650.
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2

Immunophenotyping of Lymphoid Cells

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Single cells from thymus, spleen, and lymph nodes were prepared by passing the tissue through a 40 μm cell strainer (Thermo Fisher) using PBS and a syringe plunger. Erythrocytes in blood and spleen were lyzed in lysis buffer (0.16 M NH4Cl, 0.13 M EDTA, and 12 mM NaHCO3), the cells were washed in flow cytometry buffer (2% fetal bovine serum and 2 mM EDTA in PBS) and counted in an automated cell counter (Sysmex). After FcR-blockage (anti-mouse CD16/CD32, BD Biosciences), antibodies specific for the following markers were used: CD4 (GK1.5, Biolegend or RM4-5, BD Biosciences), CD8a (53-6.7, Biolegend), CD44 (IM7, Biolegend), CD25 (PC61, BD Biosciences), CD24 (M1/69, BD Biosciences), and Qa-2 (1-1-2, BD Biosciences). Immunostained cells were analyzed on a FACS Canto II, Accuri C6, or FACS Aria (BD Biosciences). Data were analyzed using FlowJo (Tree Star) and fluorochrome-minus-one staining was used as controls.
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3

Multiparameter Flow Cytometry for Analyzing Lymphocyte Populations

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For analysis of lymphocyte populations, single-cell suspensions were prepared from homogenised spleens or bone marrow. For splenic suspension preparation, erythrocytes were destroyed with lysis buffer (BD Biosciences). The cells were treated with the appropriate combination of the following antibodies: CD16/32 (Fc block) (93) (eBioscience), B220 (RA3-6B2) (eBioscience), CD19 (eBio-1D3) (eBioscience), IgD (11-26c.2a) (eBioscience), IgM (II/41) (BioLegend), CD43 (S7) (BioLegend), CD24 (M1/69) (BD Biosciences), CD21 (7G6) (BD Biosciences), and BP-1/Ly-51 (6C3) (BioLegend). To identify splenic plasma cells or plasma cells from lymph node in vivo, cells positive for CD138 (281.2) (eBioscience) and negative for IgD (11-26c.2a) were considered plasma cells. For analysis of in vitro B-cell cultures, after blocking Fc receptors using anti-CD16/32 antibody, CTV-labelled cells were stained with the antibodies CD138 (281.2) and IgG1 (A85.1). For detection of vimentin using flow cytometry, anti-vimentin antibody (ERP3776) (Abcam) was used.
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4

Multicolor Flow Cytometry Immune Profiling

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Fluorochrome-or biotin-labeled monoclonal antibodies against the following antigens: CD8 (53-6.7), CD44 (IM7), CD62L (MEL-14), CD124 (mIL4R-M1), CXCR3 (CXCR3-173), and CD24 (M1/69) were purchased from BD Bioscience (San Jose, CA, USA), eBioscience (San Diego, CA, USA), and BioLegend (San Diego, CA, USA). Single-cell suspensions were labeled with antibodies for 30 min at 4℃. For intracellular labeling, prepared cells were resuspended in a mixture of fixation and permeabilization buffers from the Foxp3 staining buffer kit (eBioscience, San Diego, CA, USA). Then, intracellular labeling was performed using antibody Eomes (BD Bioscience, San Diego, CA, USA). Flow cytometry was performed on a FACSCalibur and LSR Fortessa (Becton Bioscience, Mountain View, CA, USA). The data were analyzed using the FlowJo software (TreeStar, Ashland, OR, USA).
For the intracellular cytokine assay, CD8 T cells isolated from mouse spleens were stimulated with 50 ng/mL phorbol 12-myristate 13-acetate (PMA) and 1.5 µM ionomycin (Sigma-Aldrich, St Louis, MO, USA) for 4 h at 37℃ in a CO2 incubator, followed by an additional incubation in the presence of 10 µg/mL brefeldin A (Sigma-Aldrich, St Louis, MO, USA) for 2 h. Cultured cells were labeled with anti-CD8 and anti-CXCR3, followed by fixation, permeabilization, and intracellular cytokine labeling with anti-IFN-γ.
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