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Phosphorylated erk p erk

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Phosphorylated-ERK (p-ERK) is a laboratory reagent used to detect and quantify the phosphorylated form of the Extracellular Signal-regulated Kinase (ERK) protein. ERK is a key component of the Mitogen-Activated Protein Kinase (MAPK) signaling pathway, which plays a crucial role in cellular processes such as cell proliferation, differentiation, and survival.

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8 protocols using phosphorylated erk p erk

1

Glioma Cell Line Characterization

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The human glioma U-251 cell line was kindly provided by Dr. Dah-Yu Lu (Department of Pharmacology, School of Medicine, China Medical University, Taichung, Taiwan). The human glioma GBM8401 and GBM8901 cell line was kindly provided by Dr. Li-Sung Hsu (Institute of Medicine, Chung Shan Medical University, Taichung, Taiwan). The U-87MG (BCRC No. 60360) and M059K cell line (BCRC No. 60381) were purchased from the Bioresources Collection and Research Center (BCRC, Hsinchu, Taiwan). These cells were cultured in DMEM/F12 and MEM medium supplemented with 1 × penicillin/streptomycin and 10% fetal bovine serum (HyClone, Logan, UT, USA) were incubated at 37 °C in a humidified incubator containing a 5% CO2 atmosphere. LCN2 antibody was purchased from R&D Systems, Inc (Minneapolis, MN, USA). U0126 (MEK inhibitor), siRNA-CTSD (si-CTSD), Cathepsin D (CTSD), t-ERK, β-actin, HRP-mouse and HRP-rabbit antibodies were purchased from Santa Cruz Biotechnology (Santa Cruz, CA, USA). Matrigel Matrix was purchased from Corning company (Tewksbury, MA, USA). Phosphorylated-ERK (p-ERK) was obtained from Cell Signaling Technology (Beverly, MA, USA).
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2

Western Blot Analysis of Neuronal Markers

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Proteins from P19 cells were homogenized in M-PER lysis buffer (Pierce Chemical Co., Rockford, IL). Extracted proteins (15 µg) were separated by SDS-polyacrylamide gel electrophoresis and were electrophoretically transferred onto a membrane according to the previously described approach [20] (link). The membrane was blocked in blocking buffer and incubated with antibodies to NELL2 (Santa Cruz Biotech., Santa Cruz, CA, Catalogue No. sc-54637), β-actin (Sigma-Aldrich, Catalogue No. A5441), Tuj1 (Santa Cruz Biotech., Catalogue No. sc-5274), NeuN (Millipore, Billerica, MA, Catalogue No. MAB377), N-cadherin (Abcam, Boston, MA, Catalogue No. ab76057), phosphorylated ERK (pERK) (CELL Signaling Technology, Beverly, MA, Catalogue No. 9101), ERK (Santa Cruz Biotech., Catalogue No. sc-153), or c-Fos (Santa Cruz Biotech., Catalogue No. sc-7202). Blots were developed using horseradish peroxidase-conjugated anti-goat secondary antibody (Santa Cruz Biotech., Catalogue No. sc-2020), anti-mouse secondary antibody (Santa Cruz Biotech., Catalogue No. sc-2005) or anti-rabbit secondary antibody (Santa Cruz Biotech., Catalogue No. sc-2004). Immunoreactivity was detected with an enhanced chemiluminescence (ECL) kit (Amersham Pharmacia Biotech., Buckinghamshire, UK).
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3

Western Blot Analysis of Signaling Proteins

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Cells were lysed using cell lysis buffer (Cell Signaling Technology, Beverly, MA, USA). Sample lysates were subject to SDS-PAGE according to a standard protocol. After being transferred to membranes, the samples were immunoblotted with 1000-fold diluted primary antibodies including phosphorylated Akt (p-Akt), Akt (Akt), α-tubulin, phosphorylated Erk (p-Erk), Erk(Erk), phosphorylated p65, α-SMA, TGF-β and β-actin (Cell signaling, MA,USA). The resulting membranes were incubated with secondary antibodies conjugated to horseradish peroxidase (Santa Cruz Biotechnology, CA, USA). Bands were revealed using an enzyme-linked chemiluminescence detection kit (Amersham Biosciences, Piscataway, NJ, USA) and band density is quantified using an analyser (LumiVision; Aisin, Kariya, Japan).
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4

Gene Expression and Protein Analysis

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mRNA from cell lysates was converted to cDNA by polymerase chain reaction (PCR) using random hexamers (Life Technologies) method. Using the delta-delta CT method of quantitative PCR (qPCR), relative gene expression was calculated using TaqMan primers to TFAP2C, RET, and EGFR with 18s rRNA subunit (Life Technologies) used as an endogenous control. Western blots were performed using antibodies to TFAP2C, EGFR, ERK (Santa Cruz Biotechnology: Dallas, TX, USA), RET, and phosphorylated ERK (p-ERK) (Cell Signaling: Beverly, MA, USA) with GAPDH (Santa Cruz Biotechnology) used as a loading control. Relative protein levels were quantified from western blots using ImageJ (http://rsb.info.nih.gov/ij/download.html) per standard protocol. Either GAPDH or total ERK were used to normalize the relative densities.
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5

Luteolin Modulates Inflammatory Pathways

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Luteolin (purity > 98%; molecular weight, 286.24; chemical formula C15H10O6), LPS, dimethylsulfoxide (DMSO) and 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT) were purchased from Sigma (St. Louis, MO, USA). Antibodies against NF-κB p65, p38, phosphorylated p38 (p-p38), JNK, phosphorylated JNK (p-JNK), ERK, phosphorylated ERK (p-ERK), Akt and phosphorylated Akt (p-Akt) were obtained from Cell Signaling Technology (Beverly, MA, USA). Antibodies against TLR-4 were obtained from Santa Cruz Biotechnology (Santa Cruz, CA, USA). Mouse anti-β-actin antibody was purchased from Sigma.
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6

Dioscin Modulates Inflammatory Pathways

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Recombinant rat IL-1β (501-RL) was purchased from R&D Systems (Minneapolis, MN, USA). Dioscin (N1723) was supplied by ApexBio Technology (Houston, TX, USA). Dioscin was dissolved in dimethyl sulfoxide (DMSO) for in vitro experiments. Dulbecco’s modified Eagle’s medium (DMEM/F12) and fetal bovine serum (FBS) were procured from Gibco (Grand Island, NY, USA). Antibodies specific for iNOS (ab15323), aggrecan (ab36861), and collagen II (ab188570) were obtained from Abcam (Cambridge, UK). Antibodies specific for P65 (#8242), phosphorylated P65 (P-P65) (#3033), IκBα (#4814), phosphorylated-IκBα (P-IκBα) (#2859), IKKβ (#8943), phosphorylated-IKKα/β (P-IKKα/β) (#2697), P38 (#8690), phosphorylated-p38 (p-p38) (#4511), ERK (#4695), phosphorylated-ERK (P-ERK) (#4370), JNK (#9252), and phosphorylated-JNK (P-JNK) (#4668) were procured from Cell Signaling Technology (Danvers, MA, USA). Antibodies specific for MMP1 (10,371–2-AP), MMP3 (17,873–1-AP), and MMP13 (18,165–1-AP) were supplied by Proteintech Group (Wuhan, China). Antibodies against GAPDH (BM1623) and ADAMTS5 (A02802-1) were procured from Boster (Wuhan, China).
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7

Lipid-induced Stress Response Mechanisms

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Palmitic acid (PA), oleic acid (OA), fatty acid‐free bovine serum albumin (BSA), recombinant HGF, and other reagents were purchased from Sigma (St. Louis, MO). PA was conjugated with BSA before various experiments. OA was dissolved in phosphate‐buffered saline (PBS) to get a final working concentration of 10 mM. Antibodies to cleaved caspase‐3, p53‐upregulated modulator of apoptosis (PUMA), cleaved poly adenosine diphosphate ribose polymerase (PARP), HGF, c‐Met, phosphorylated IRE1α (p‐IRE1α), and neutralizing antibody to HGF were purchased from Abcam (Carlsbad, CA). Antibodies to activating transcription factor 4 (ATF4), phosphorylated eukaryotic initiation factor 2α (p‐eIF2α), total c‐Jun N‐terminal kinase (JNK), phosphorylated JNK (p‐JNK), total nuclear factor‐κB (NF‐κB), phosphorylated NF‐κB (p‐NF‐κB), total extracellular signal‐regulated kinase (ERK), and phosphorylated ERK (p‐ERK) were purchased from Cell Signaling Technology (Beverly, CA). Horseradish peroxidase (HRP)‐conjugated anti‐mouse and anti‐rabbit secondary antibodies were from Dako (Carpinteria, CA). Anti‐β‐actin antibody was from Lab Vision Co. (Fremont, CA). The antibodies catalogue numbers were provided in Supporting Information Table S1.
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8

Western Blotting of Key Signaling Proteins

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Western blotting assay was used to detect HSP90α (ADI-SPS-771-F; Enzo Life Science), HSP90β (ADI-SPA-844-200; Enzo Life Science), TGF-β1 (ab92486; Abcam, Toronto, ON, Canada), α-smooth muscle actin (α-SMA) (ab7817; Abcam), proliferating cell nuclear antigen (ab18197; Abcam), phosphorylated Smad2 ( p-Smad2) (#3101; Cell Signaling Technology, Beverly, MA, USA), Smad2 (ab63576; Abcam), collagen 1A1 (ab34710; Abcam), ERK (#9102; Cell Signaling Technology), phosphorylated ERK ( p-ERK) (#4377; Cell Signaling Technology), LRP1 (ab92544; Abcam), Na,K-ATPase (#3010; Cell Signaling Technology), TGF-βRI (ab31013; Abcam) and glyceraldehyde 3-phosphate dehydrogenase (GAPDH) (ab9485; Abcam). See supplementary methods for details.
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