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16 protocols using topotecan hydrochloride hydrate

1

Topotecan and Hyper-Charged Peptides

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Topotecan hydrochloride hydrate was purchased (cat#1672257, Sigma Aldrich, St. Louis, MO, USA) and was dissolved in 0.1% DMSO to make a final stock concentration of 20 mg/mL. Six different hyper-charged peptides (named in the current study as HC1 to HC6) were used. CAPs with 12 amino acid residues in length containing D- or L- lysine and arginine repeats were purchased from M/s. Peptide Mimotopes Pty Ltd., Victoria, Australia. All the peptides with a ≥95% purity were used as received. High-performance liquid chromatography (HPLC) of the purified peptides provided by the supplier is presented as Supporting Information Figures S4−S10.
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2

Ovarian Cancer Cell Lines for ABCG2 Inhibitor Study

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Igrov1 human ovarian carcinoma cells and an Igrov1-derived cell line overexpressing ABCG2, Igrov1/T8, were generously provided by Dr. Douglas Ross at the University of Maryland and were received in 2011. Cells were cultured in RPMI 1640 medium (Gibco, InVitrogen Corporation, Carlsbad, CA) supplemented with 10% fetal bovine serum (Gibco), 1% penicillin/streptomycin (Gibco), and 5 ng/L ciprofloxacin (Bayer Pharmaceuticals, Berkeley, CA) and maintained at 37°C in an incubator with an atmosphere of 95% air and 5% CO2. The Igrov1/T8 ABCG2 overexpressing phenotype was maintained by exposure to 950 nM topotecan hydrochloride hydrate (Sigma, Saint Louis, MO) for one hour per week on a day that the cells were not expanded. We synthesized and identified three ABCG2-selective efflux inhibitors, CID44640177, CID1434724, and CID46245505, by high-throughput flow cytometry as previously reported.(28 (link),29 ) For the purposes of this manuscript we will refer to the ABCG2 inhibitors CID44640177, CID1434724, and CID46245505 as 177, 724, and 505, respectively.
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3

Synthesis and Evaluation of Nanoparticle Formulations

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Cetyltrimethylammonium bromide (CTAB), Tetraethyl orthosilicate (TEOS), 3-Aminopropyl triethoxysilane (APS), Poly acrylic acid (PAA), and Chitosan (CS) were purchased from Hi Media, India. Topotecan hydrochloride hydrate (TPT), Quercetin (QT), 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT), 1-Ethyl-3-(3-dimethylaminopropyl) carbodiimide (EDC), N-Hydroxysuccinimide (NHS), and 2′,7′-Dichlorofluorescein diacetate (DCFH-DA) were purchased from Sigma-Aldrich, India.
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4

Topotecan Cytotoxicity Assay in SCLC Cells

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The CellTiter-Blue cell viability assay (Promega, Southampton, UK) was used to determine SCLC cell sensitivity to topotecan hydrochloride hydrate (Sigma-Aldrich, Gillingham, UK). Briefly, cells were seeded in triplicate at 10,000 cells per well of a 96-well plate in media containing topotecan (0 nM to 500 nM). The contents were mixed thoroughly and the plates incubated at 37°C for 4 days. At day 4, CellTiter-Blue reagent (20 μl) was added to each well, the plates incubated at 37°C for 2 hr and fluorescence intensity determined using the GloMax Multi Detection System (Promega, Southamption, UK) at excitation and emission wavelengths of λex 560 nm and λem 590 nm. Percentage viability (%) was calculated using background-subtracted readings as:
(Fluorescence readtreatedFluorescence readuntreated)100%.
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5

Rhabdoid Tumor and Rhabdomyosarcoma Cell Culture

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The human malignant rhabdoid tumor cell line JMU-RTK-2 was obtained from the JCRB cell bank and cultured in Dulbecco’s modified Eagle’s medium supplemented with 5% fetal bovine serum. The rhabdomyosarcoma cell line RMS-YM was obtained from RIKEN BRC cell bank and cultured in RPMI-1640 supplemented with 10% fetal bovine serum, 20 mM-HEPES, and 0.1 mM None-essential amino acids (FUJIFILM Wako Pure Chemical Corporation). All the cells were maintained at 37 °C in a humidified atmosphere containing 5% CO2. Topoisomerase inhibitors, etoposide, doxorubicin, and epirubicin were purchased from FUJIFILM Wako Pure Chemical Corporation (Osaka, Japan), ellipticine was purchased from Merck (DS, Darmstadt, Germany), topotecan hydrochloride hydrate was purchased from Sigma Aldrich (St Louis, MO, USA), and siremadlin was purchased from Medchemexpress (Monmouth Junction, NJ, USA).
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6

Cell Viability and Cytotoxicity Assay Protocol

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Dulbecco’s Modified Eagle Medium (DMEM), fetal bovine serum (FBS), 0.25% Trypsin-EDTA, Hanks’s balanced salt solution (HBSS), and penicillin/streptomycin solution were purchased from GIBCO (Invitrogen, NY, USA). Trypan blue, Triton X-100, dimethyl sulfoxide (DMSO), and topotecan hydrochloride hydrate were purchased from Sigma-Aldrich (Madrid, Spain). The 4’,6-diamidino-2-phenylindole (DAPI) was purchased from Sigma-Aldrich (St. Louis, MO, USA). Phalloidin was purchased from VWR. CytoTox 96® Non-Radioactive Cytotoxicity Assay was purchased from Promega Corporation (WI, USA). PrestoBlue™ Cell Viability reagent and Qubit™ 1X dsDNA HS Assay Kit for DNA quantification was purchased from Thermo Fisher Scientific (Waltham, MA, USA). Caspase 3, Caspase 8, and Caspase 9 Multiplex Activity Assay Kit (Fluorometric) was purchased from Abcam (Cambridge, UK).
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7

Topotecan Cytotoxicity Assay in SCLC Cells

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The CellTiter-Blue cell viability assay (Promega, Southampton, UK) was used to determine SCLC cell sensitivity to topotecan hydrochloride hydrate (Sigma-Aldrich, Gillingham, UK). Briefly, cells were seeded in triplicate at 10,000 cells per well of a 96-well plate in media containing topotecan (0 nM to 500 nM). The contents were mixed thoroughly and the plates incubated at 37°C for 4 days. At day 4, CellTiter-Blue reagent (20 μl) was added to each well, the plates incubated at 37°C for 2 hr and fluorescence intensity determined using the GloMax Multi Detection System (Promega, Southamption, UK) at excitation and emission wavelengths of λex 560 nm and λem 590 nm. Percentage viability (%) was calculated using background-subtracted readings as:
(Fluorescence readtreatedFluorescence readuntreated)100%.
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8

Topotecan Quantification Protocol

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Cassettes, reagent kits (Prod No. PE-FSPG-047-R), the precursor (Prod No. 3193.0075), elution solution (Prod No. PE-FSPG-047-R-V1), and reference standard (PE-FSPG-047-H) were purchased from ABX (Radeberg, Germany). N-Desmethyl topotecan was purchased from Synfine Research (Toronto, Canada). Topotecan hydrochloride hydrate (>98%) standard and N,N-dimethylformamide (DMF, anhydrous 99.8%) were purchased from Sigma-Aldrich (St. Louis, MO, USA) and used without further purification. Sodium hydroxide National Institute of Standards and Technology (NIST) traceable solution (0.5 N) was purchased from Aqua Solutions, Inc. (Deer Park, TX, USA) and used without further purification. Solid-phase extraction cartridges were purchased from Waters (Milford, MA, USA). Ultra-high purity N.O.S. gas (99% nitrogen/1% oxygen) was purchased from Airgas (White Plains, NY, USA). All other reagents not listed above were of the highest grade available from Sigma-Aldrich (St. Louis, MO, USA) and Fisher Scientific (Pittsburgh, PA, USA). End of synthesis radioactivity was determined using a Biodex AtomLab 500 dose calibrator (Shirley, NY, USA).
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9

Comparative Cytotoxicity of Anticancer Drugs

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Dulbecco’s modified eagle medium (DMEM), calcium chloride dehydrate (CaCl2·2H2O), sodium bicarbonate (NaHCO3), dimethyl sulphoxide (DMSO), thiazolyl blue tetrazolium bromide (MTT), and ethylene diamine tetraacetic acid (EDTA) were purchased from Sigma-Aldrich (St. Louis, MO, USA). DMEM powder, fetal bovine serum (FBS), trypsin-ethylenediamine tetraacetate (trypsin-EDTA), and penicillin-streptomycin were obtained from Gibco BRL (CA, USA). Anticancer drugs including paclitaxel (Pac), docetaxel (Doc), mitomycin C from streptomyces caespitosus (Mito) and topotecan hydrochloride hydrate (Topo) were purchased from Sigma. Topotecan is not approved for breast cancer and is used as a control drug in this study to observe cytotoxic effects of variously indicated medications against breast cancer cells. Acetonitrile (ACN) and triethylamine (TEA) were from Fisher Scientific (Loughborough, UK). All the chemicals used for HPLC were HPLC grade. MCF-7 and 4T1 cells were originally from ATCC.
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10

Topotecan Resistance Selection in Leishmania

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Three L. infantum WT independent clones, which were obtained by plating the MHOM/MA/67/ITMAP-263 strain onto solid M199, were independently selected in 25 cm2 flasks containing 5 ml M199 medium supplemented with 10% heat-inactivated fetal bovine serum (FBS) and 5 μg/ml hemin in the presence of increasing TPT concentrations, as described previously [23 (link)]. Briefly, the stepwise drug selection ranged from 1 × the EC50 of TPT (24 μM as determined in the present study) up to 16 × the EC50 of TPT (384 μM), with a twofold increase in drug concentration (24, 48, 96, 192, and 384 μM) every three sub-culturing passages. Topotecan hydrochloride hydrate (Sigma-Aldrich, St. Louis, MO, USA) was used as the source of TPT.
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