The largest database of trusted experimental protocols

P atm ser1981

Manufactured by Santa Cruz Biotechnology
Sourced in United States

The P-ATM (Ser1981) is a laboratory equipment product from Santa Cruz Biotechnology. It is used to detect and measure the phosphorylation of the ATM (Ataxia Telangiectasia Mutated) protein at the serine 1981 residue. The core function of this product is to provide a tool for researchers to analyze the activation of the ATM protein, which plays a crucial role in the cellular response to DNA damage.

Automatically generated - may contain errors

4 protocols using p atm ser1981

1

Western Blot Analysis of DNA Damage Response

Check if the same lab product or an alternative is used in the 5 most similar protocols
The details are described in previous report [32 (link)]. For Western blotting, the used antibodies were as following: p21 (OP79; Oncogene Science), p-ATM (Ser1981) (sc-47739; Santa Cruz, CA, USA), p53 (sc-98, Santa Cruz), cleaved caspase-3 (#9661; Cell Signaling, Danvers, MA, USA), phospho-Chk2 (Thr68) (#2197; Cell Signaling), Chk2 (#05-649; EMD Millipore, Temecula, CA, USA). LC3A/B (#12741; Cell Signaling), Chk1 (#2345; Cell Signaling), phospho-Chk1 (Ser345) (#2348; Cell Signaling), phospho-Histone H2A.X (Ser139) (#9718; Cell Signaling), ATM (GTX70103; GeneTex, Irvine, CA, USA), GAPDH (#2118, Cell Signaling), PARP (#9542; Cell Signaling), phospho-p53 (Ser15) (#9284; Cell Signaling). phospho-ATR (Ser428) (#2853; Cell Signaling). PAI-1 (#612024; BD Transduction Laboratories, Lexington, KY, USA).
+ Open protocol
+ Expand
2

Gamma-Ray Induced DNA Damage Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were transfected with expression plasmids using Lipofectamine 3000 (Invitrogen, CA, USA), and were exposed to γ-rays (5 Gy) as previously described.11 (link) Antibodies against phosphorylated cAMP response element bind protein (p-CREB, Ser139), phosphorylated ataxia telangiectasia-mutated protein (p-ATM, Ser1981), and the catalytic subunit of DNA-dependent protein kinase (DNA-PKcs) were obtained from Santa Cruz Biotechnology. Antibodies against p-H2AX (Ser133), phosphorylated PKA substrates, cleaved poly (ADP-ribose) polymerase (PARP), and cleaved caspase-9 were purchased from Cell Signaling Technology (Beverly, MA, USA). An antibody against β-actin was purchased from Sigma-Aldrich, and Antibodies against DNA-PKcs phosphorylated at Thr2609 (T2609) and Ser2056 (S2056) were purchased from Abcam (Cambridge, UK). The proteins were visualized using enhanced chemiluminescence (Thermo Fisher Scientific, Waltham, MA, USA), and the blot images were recorded using the LAS-3000 luminescent image analyzer (Fuji, Tokyo, Japan). The densities of the visualized bands were analyzed using Multi Gauge v.2.3 software (Olympus, Tokyo, Japan), and the band densities were expressed as ratios of the corresponding control densities.
+ Open protocol
+ Expand
3

Immunoblotting Methodology and Antibody Validation

Check if the same lab product or an alternative is used in the 5 most similar protocols
Immunoblotting was performed as described [31] (link), [47] (link). Rabbit monoclonal anti-hMOB2 antibodies were produced in collaboration with Epitomics. The following antibodies were used in immunoblotting: ATM (Millipore, 07-1286, 1/1000), p-ATM Ser1981 (Santa Cruz, sc-47,739, 1/200), BRCA2 (Calbiochem, OP95, 1/500), p-BRCA2 Ser3291 [49] (link), FANCD2 (Abcam, ab108928, 1/500), RAD51 (Santa Cruz, sc-8349, 1/1000), p-RAD51 Ser14 [50] (link), RPA70 (Millipore, NA13, 1/100), RPA32/34 (Millipore, NA18, 1/1000), p-RPA32/34 Ser4/8 (Bethyl Labs, A300-245A, 1/1000), NBS1 (BD Biosciences, 611,870, 1/1000), p-NBS1 Ser343 (Cell Signalling, 3001, 1/500), p53 (Santa Cruz, sc-126, 1/1000), γH2AX (Cell Signalling, 9718, 1/500), HA (Cell Signalling, 3724, 1/1000) and GAPDH (Santa Cruz, sc-32,233, 1/1000). Polyclonal rat anti-tubulin (YL1/2) was produced in our laboratory. Densitometric analysis of immunoblots were performed using the ImageJ software (NIH).
+ Open protocol
+ Expand
4

DNA Damage Response Pathway Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Following media removal and a phosphate-buffered saline (PBS) wash, cell lysis was performed on 60-mm dishes using 50 mM Tris HCl plus 2% sodium dodecyl sulfate (SDS), with phosphatase and protease inhibitors (Roche#04906837001, Roche#04693159001). Cells were scraped and boiled at 95 °C for 5 min, before NanoDrop™ 8000 (A280) protein quantification. Proteins were resolved using the SDS-polyacrylamide gel electrophoresis gel system (Life Technologies), detected using IRDye secondary antibodies (LI-COR) and visualised on the Odyssey CLx imaging system (LI-COR). Primary antibodies used were obtained from Abcam (ab) or Cell Signaling Technology (CST), unless otherwise stated: ATM (ab78), p-ATM-Ser1981 (ab81292), DNA-PKcs (ab44815), P-DNA-PKcs-Ser2056 (ab18192), KAP1 (ab22553), P-KAP1-Ser824 (ab133440), RPA32 (ab2175), RAD50 (ab89), p-Chk2-Thr68 (ab3501), Chk2 (CST3440), p-Rad50-Ser635 (CST14223S), Chk1 (CST2360), p-Chk1-Ser345 (CST2348), H2AX (CST7631), β-Actin (CST4970), β-Tubulin (CST2146), Lamin B1 (CST12586), Vinculin (CST13901), ATR (Santa Cruz Biotechnology#SC-1887), p-ATR-Thr1989 (Genetex#GTX128145), γH2AX-Ser139 (Millipore#05-636), p-RPA32-Ser4/8 (Bethyl#A300-245A).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!