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7 protocols using rpmi 1640 media

1

Polarization of Human Macrophages

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Human peripheral blood mononuclear cells (hPBMCs) were isolated from buffy coats of healthy donors (Blodbanken i Oslo, Oslo Universitetessykehus) by Isopaque-Ficoll (Lymphoprep; Alere, A80102010) gradient centrifugation and incubated in flasks with 10 mL serum-free RPMI 1640 media (Biowest, L0496–500) for 90 minutes (min) for plastic adherence of monocytes before washing. Cells were then incubated for 6 days with RPMI 1640 media 10% FBS (Merck, F7524) and), 1% P/S (Merck, P4458) and 20 ng/mL macrophage colony stimulating factor (M-CSF; R&D Systems, 216-MC). For polarization, the cells were seeded in a 24-well plate and polarization was obtained towards the M1 or M2 phenotypes by incubation with RPMI 1640 supplemented with LPS (100 ng/mL) and IFNγ (20 ng/mL) for M1 polarization or IL-4 (20 ng/mL) for M2 polarization, for 18 h. The specific macrophage polarization was validated by measuring the mRNA expression of M1 and M2 markers in the cells by RT-qPCR. Cells isolated from a buffy coat were used in only one independent experiment, with multiple biological replicates. Two independent isolations from different buffy coats were performed.
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2

Currant Extract Effects on Microglial Cells

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BV2, murine microglial cells, were maintained at 37 °C and 5% CO2 in a humidified incubator. Cells were cultured in RPMI 1640 Media (Biowest) supplemented with 10% fetal bovine serum (Biosera) and 100 U/ml penicillin G and 100 mg/ml streptomycin sulfate. BV2 cells were plated on 24-well plates at a density of 3 × 104 cells per well in RPMI complete medium. The next day, the cells were incubated in the presence or absence of Corinthian currant extract or a glucose/fructose mixture in serum-free medium for 24 and 48 h at 37 °C. The currant polar phenolic extract was used at concentrations 1 and 5 μg GAE/mL and the glucose/fructose mixture at concentrations 2.6 and 12.6 mM that match the glucose/fructose concentration of currant extract. The final methanol concentration in each well was 0.68% (v/v). The cell medium was collected after indicated treatments and supplemented with Complete Mini Protease Inhibitor Cocktail and 1 mM serine protease inhibitor 4-(2-aminoethyl)-benzenesulfonyl fluoride. The cells were washed with ice-cold PBS and lysed at 4 °C in lysis buffer (50 mM Tris–HCl (pH 7.5), 150 mM NaCl, 1% (v/v) Nonidet P-40, 0.25% (w/v) deoxycholate, and Complete Mini Protease Inhibitor Cocktail). The protein concentration in cell lysates was determined using the Lowry assay (DC Protein Assay Kit, Bio-Rad).
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3

Culturing Human Liver Cancer Cells

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Human liver hepatocellular carcinoma (HepG2) cell line was cultured and maintained in RPMI 1640 media (Biowest, France) supplemented with 10% fetal bovine serum (Biowest, France), antibiotics (100IU/ml 2% penicillin-streptomycin) and 0.5% fungizone (Biowest, France). The cells were maintained in monolayer culture at 37°C under a humidified atmosphere of 5% CO2. The cells were sub-cultured by trypsinization (0.025% trypsin in 0.0025% EDTA, Biowest, France) and maintained in tissue culture laboratory at the National Cancer Institute, Cairo University, with cryogenic banking of low-passage cells to maintain uniformity of cell properties through the study. Cell numbers and viability were monitored by standard Trypan blue dye exclusion procedures and growth curves for HepG2 was determined under baseline conditions prior to investigation of cytotoxicity (Loutfy, Shalaby, et al., 2015).
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4

Cytotoxic Agents in Cell Culture

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Methotrexate, cytarabine and doxorubicin were obtained from Sigma-Aldrich (St. Louis, MO). RPMI-1640 media was obtained from Biowest (Labclinics). Antibiotic (10,000 U/ml penicillin, 10 mg/ml streptomycin), and PBS were obtained from Biological Industries (Kibbutz Beit Haemet, Israel), and fetal bovine serum from Invitrogen (Carlsbad, CA, USA).
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5

PBMC and PMN Isolation from Blood

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PBMC and PMN cells were isolated from whole heparinized blood by Lymphosep (Lymphocyte Seperation MediaCE; Biowest, France) density gradient centrifugation at 400 × g at room temperature for 30 min according to the manufacturers' protocol. After centrifugation, the mononuclear band located between Lymphosep and blood plasma was transferred carefully to another centrifuge tube and washed three times with Dulbecco's phosphate-buffered saline (DPBS; Biowest, France) by centrifugation for 10 min at 300 × g at room temperature. The PMN and erythrocyte pellet formed under the Lymphosep layer were also transferred to a separate tube where the RBCs were lysed twice with ACK lysis buffer (150 mM NH4Cl, 10 mM KHCO3, 0.1 mM Na2EDTA, pH 7.2–7.4). The remaining PMNs were washed three times with DPBS by centrifugation for 10 min at 300 × g at room temperature. After the third wash, both PBMCs and PMNs were resuspended in 2-3 mL of RPMI-1640 media (Biowest, France) supplemented with 10% fetal bovine serum (FBS; Biowest, France). Cells were counted with 0.4% (w/v) trypan blue solution (Sigma-Aldrich, St. Luis, MO, USA) in a hemocytometer.
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6

Synthesis of Gold and Silver Nanoparticles

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Fetal bovine serum (FBS), phosphate-buffered saline (PBS), trypsin-EDTA, antibiotic antimycotic solution, thiol-polyethylene glycol-amine (SH-PEG-NH2), molecular weight 2kDa, trisodium citrate dehydrate (C6H5O7Na3·2H2O or NaCt), tetrachloroauric acid tetrahydrate (HAuCl4·4H2O, 99.99%), silver nitrate (AgNO4), and L-ascorbic acid, ≥99% were purchased from Sigma Aldrich® LLC (St. Louis, MO, USA). Roswell Park Memorial Institute (RPMI-1640) media and Minimum Essential Medium (MEM) were purchased from Biowest® (Nuaillé, France). QIAzol lysis reagent was purchased from QIAGEN Inc. (Valencia, CA, USA). Norgen’s MicroScript microRNA cDNA Synthesis Kit was purchased from Norgen BioteK (Thorold, ON, Canada).
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7

MCF-7 Cell Culture Protocol

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MCF-7 breast adenocarcinoma cell line (ATCC, USA) was cultured in RPMI 1640 media(Biowest) supplemented with 10% fetal bovine serum (Biowest), and antibiotics (2% penicillin-streptomycin (100 IU/ml), and 0.5% fungizone (Biowest). The cells were maintained in monolayer culture at 37 o C under a humidified atmosphere of 5% CO 2 . The cells were sub-cultured by trypsinization (0.025% trypsin and 0.0025% EDTA; Biowest), and maintained in tissue culture laboratory at the National Institute of Laser Enhanced Sciences (NILES), Giza, Egypt with cryogenic banking of low-passage cells to maintain uniformity of cell properties through the study (Schmidt and Emmons, 1989) . Cell numbers and viability were monitored by standard Trypan blue dye exclusion procedures. Growth curves for MCF-7 were determined under baseline conditions prior to investigation of cytotoxicity.
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