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Pre mir125b 5p

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Pre-miR125b-5p is a synthetic miRNA precursor molecule that mimics the natural pre-miRNA form of miR-125b-5p. It is designed for use in research applications.

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2 protocols using pre mir125b 5p

1

Cloning Luciferase Reporters for miR-125b-5p Targets

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To generate MMP11 luciferase reporter constructs, fragments of putative miR125b-5p binding sites were cloned into the 3′UTR region using HindIII-SpeI restriction sites of the pMIR-report plasmid (Ambion, Carlsbad, USA) (Fig. 2D). Correct insertion was confirmed by sequencing. For dual luciferase assays, 3×105 SGBS cells/ml were co-transfected with 0.2 µg of firefly luciferase reporter plasmid, 0.1 µg of a control vector containing Renilla luciferase (Promega, Fitchburg, Madison, USA), and 500nmol of pre-miR125b-5p (Ambion) or scrambled negative control RNA (pre-ntRNA, Ambion) 24h post-transfection. Luciferase activity was quantified using Dual Luciferase Assay System (Promega) according to the manufacturer's instructions. Putative miR125b-5p binding sites were mutated using site-directed mutagenesis primers.
MMP11 mutagenesis Primer (1): F5′-TGGCTTGGATGCCCTAATGAGTGCTGACCCCTGCC-3′, R5′-GGCAGGGGTCAGCACTCATTAGGGCATCCAAGCCA-3′; MMP11 Mutagenesis Primer (2): F5′-CTGAGCCCATGTCTCCTAATGAGGATGGGGTGGGGT-3′, R5′-ACCCCACCCCATCCTCATTAGGAGACATGGGCTCAG-3′; MMP11 Mutagenesis Primer (3): F5′-TCTCCATCCCTGTCCCTAATGATAGCACCATGGCAGGAC-3′, R5′-GTCCTGCCATGGTGCTATCATTAGGGACAGGG ATGGAGA-3′.
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2

Transfection and Knockdown of Adipogenesis Regulators

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Preadipocytes were transfected using the Neon Transfection System 100 μl Kit (Invitrogen) according to Bernhard et al.43 (link) For MMP11 overexpression, 1.25 µg of expression plasmid (Ambion, Abingdon, UK) were transfected and empty pCMV6-XL5 vector was used as a control. For miR125b-5p overexpression, 500 nmol of pre-miR125b-5p (Ambion) or a scrambled negative control (pre-ntRNA, Ambion) were transfected. For MMP11 and PPARg knockdown experiments, gene-specific ON-TARGETplus SMARTpool small interfering (si)RNAs and ON-TARGETplus control reagents (Dharmacon, Lafayette, LA, USA) were used at a final concentration of 500 nmol/l. The downregulation of miR125b-5p was carried out by transfection with antagonizing miR125b-5p (anti-miR125-5p, Ambion) or scrambled negative control RNA (anti-ntRNA, Ambion). After electroporation 350,000 cells were seeded in 6-well format and differentiated. Efficient knockdown was confirmed on day 0 and 12 post-induction by qRT-PCR.
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