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6 protocols using wm115

1

Melanoma Cell Culture Under Normoxia and Hypoxia

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Two human melanoma cell lines WM115 and WM266-4 were obtained from Rockland Immunochemicals (Limerick, PA, USA). Cells were cultured in RPMI 1640 Media (ThermoFisher Scientific, Waltham, MA, USA) supplemented with 10% fetal bovine serum (EURx, Gdansk, Poland) and 100 units/mL of Penicillin-Streptomycin mix (ThermoFisher Scientific, Waltham, MA, USA). Cells were cultured in normoxic (21% O2) and hypoxic (1% O2) conditions. Reduced oxygen culture conditions were obtained, as described previously [46 (link)]. All the cells were tested negative for mycoplasma using MycoCheckTM Mycoplasma PCR Detection Kit (MoBiTec Molecular Biotechnology, Goettingen, Germany).
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2

Melanoma Cell Line Authentication and Culture

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The following cell lines were from the American Tissue Type Collection: A375, HEMN (normal adult epidermal melanocytes) and Jurkat. The following cell lines were from Rockland Immunochemicals: WM983A, WM983B, WM1366, WM115, WM266-4, WM164, WM793 and Lu1205. SW1 melanoma cells (gift from the Ronai laboratory at the Sanford Burnham Prebys Medical Discovery Institute) and SM1 melanoma cells (gift from the Smalley laboratory at the Moffitt Cancer Center) were cultured in DMEM containing 10% FBS, 1 g ml−1 glucose and 4 mM l-glutamine at 37 °C with 5% CO2. HEMN cells were grown in Lonza MGM-4 growth medium; before collection for IB analysis, the cells were switched to the same medium as the other cells overnight. Cell lines were transfected using Lipofectamine 2000 (Invitrogen). Primary CD4+ T cells were collected using the EasySep Human CD4+ negative selection isolation kit (Stemcell Technologies) according to the manufacturer’s protocols. Upon arrival at the laboratory, all cell lines are quarantined until they have passed footprint identification and mycoplasma testing (as mycoplasma negative). The identities of all cell lines (human and mouse) in the Lau laboratory are verified annually by short tandem repeat-based authentication ‘CellCheck’ services provided through IDEXX BioResearch.
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3

Transfection and Transduction of Cell Lines

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B16F10, HeLa, A375, and RPMI7951 cells were purchased from American Type Culture Collection. WM115 and WM266-4 cells were purchased from Rockland Immunochemicals. HEK 293FT cells were purchased from Life Technologies. Cells were cultured in Dulbecco's modified Eagle's medium containing 10% fetal bovine serum. HeLa cells were transfected with GFP, GFP-FAK, GFP-FERM, GFP-kinase, or GFP-FRNK constructs using polyethylenimine (Polysciences) (31 (link)). B16F10 cells were transduced with adenovirus encoding for either FAK-WT, FAK-KD, FAK FERM-WT, or FAK FERM-NLM.
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4

Characterization of Metastatic Melanoma Cells

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The melanoma cell line used was WM-115, a primary melanoma with competence for metastasis, obtained from Rockland Immunochemicals (Limerick, PA). The cell line consists of the BRAFV600D mutation and the PTEN loss of function due to hemizygous deletion and was established from 55-year old female patient. Melanoma cells were cultured in Tumor Specialized Media containing 10 % FBS and Pen/Strep. Keratinocytes were cultured in Gibco 154 medium supplemented with Human Keratinocyte Growth Serum and 1% Pen/Strep. Fibroblasts were cultured in Gibco DMEM with 10% FBS and 1% Pen/Strep.
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5

Protein Extraction from Neuronal and Tumor Cells

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Lumbar DRG and sciatic nerves from mice and a Schwann cell line (IFRS1, COSMO BIO Co., Ltd, Japan) and human melanoma cell line (WM115, Rockland Immunochemicals, Limerick, PA) were homogenized in radioimmunoprecipitation lysis and extraction buffer (Nacalai Tesque, Kyoto, Japan) and centrifuged at 14,000 g for 10 minutes at 4°C. The supernatant fractions were collected and stored at −80°C.
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6

Comparative Analysis of Melanoma Cell Lines

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Primary melanoma cell line WM115 (WM115-01-0001) and metastatic melanoma cell line SKMEL30 (03010901) were purchased from Rockland (USA) and the Ministry of Agriculture and Forestry SAP Institute Cell Bank, the Republic of Turkey, respectively. WM115 and SKMEL30 were incubated in DMEM (Capricorn, DMEM/HPA) and RPMI 1640 (Diagnovum, D840), respectively, including 10% Fetal bovine serum (FBS) (Capricorn, FBS-HI-11A), 1% Streptomycin/Penicillin (Capricorn, PS-B) at optimum conditions (37 °C, 5% CO 2 ). WM115 and SKMEL30 cell lines were used to compare the effects of Acriflavine and Echinomycin on melanoma cell lines, thus primary melanoma cell line WM115 was evaluated as a control group.
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