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Borosilicate glass pipette

Manufactured by Harvard Apparatus
Sourced in United Kingdom, United States

Borosilicate glass pipettes are laboratory equipment designed for precise liquid handling and transfer. They are made from high-quality borosilicate glass, which is resistant to thermal shock and chemical corrosion. These pipettes come in a range of sizes and volumes to accommodate various laboratory needs.

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11 protocols using borosilicate glass pipette

1

Patch Clamp of MgtE in E. coli Spheroplasts

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Patch clamp recording of MgtE using E. coli giant spheroplasts was performed in the inside-out configuration, as described previously [14 (link),56 (link)]. In brief, spheroplasts were placed in a bath solution containing 210 mM N-methyl-D-glucamine, 90 mM MgCl2, 300 mM D-glucose, and 5 mM HEPES (pH 7.2). After gigaseal formation with a borosilicate glass pipette (Harvard Apparatus, Kent, United Kingdom) with 6 to 8 mOhm resistance, the bath medium was changed to bath solution containing 300 mM N-methyl-D-glucamine, 300 mM D-glucose, and 5 mM HEPES (pH 7.2) by perfusion using a Rainer perfusion pump and a custom-made perfusion system. Bath medium containing 2 μM Fab705 was added by perfusion. The pipette solution contained 210 mM N-methyl-D-glucamine, 90 mM MgCl2, 300 mM sucrose, and 5 mM HEPES (pH 7.2). Currents were measured with an Axopatch 200B amplifier and recorded with a Digidata 1440B A/D converter under the control of pCLAMP software (Molecular Devices, USA). Currents were filtered at 2 kHz and recorded at 5 kHz. Additional reporting details regarding the electrophysiology experiments are shown in S12 Fig.
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2

Patch Clamp of MgtE in E. coli Spheroplasts

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Patch clamp recording of MgtE using E. coli giant spheroplasts was performed in the inside-out configuration, as described previously (Martinac et al. 1987) (Hattori et al. 2009 ). In brief, spheroplasts were placed in a bath solution containing 210 mM Nmethyl-D-glucamine, 90 mM MgCl 2 , 300 mM D-glucose, and 5 mM HEPES (pH 7.2).
After gigaseal formation with a borosilicate glass pipette (Harvard Apparatus, Kent, UK) with 6-8 mOhm resistance, the bath medium was changed to bath solution containing 300 mM N-methyl-D-glucamine, 300 mM D-glucose, and 5 mM HEPES (pH 7.2) by perfusion using a Rainer perfusion pump and a custom-made perfusion system. Bath medium containing 2 μM Fab705 was added by perfusion. The pipette solution contained 210 mM N-methyl-D-glucamine, 90 mM MgCl 2 , 300 mM sucrose, and 5 mM HEPES (pH 7.2). Currents were measured with an Axopatch 200B amplifier and recorded with a Digidata 1440B A/D converter under the control of pCLAMP software (Molecular Devices). Currents were filtered at 2 kHz and recorded at 5 kHz.
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3

Trans-Round Window Membrane Injection

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All mice were operated on at postnatal days 0–2 (P0–P2) under hypothermic anesthesia, for which animals were placed in a container with crushed ice for 3–5 min. trans-RWM injections were performed under an operating microscope. First, a post-auricular incision exposed the cochlea bulla, which was opened with fine forceps. Anatomic landmarks included the RWM and stapedial artery, which were identified before injections (Figure S1). Then, for the trans-RWM injection, either miTmc or miSafe mixed in a 10:1 ratio with 2.5% fast green dye was loaded into a borosilicate glass pipette (1.5 mm outer diameter [OD] × 0.86 mm inner diameter [ID], Harvard Apparatus) pulled with a Sutter P-97 micropipette puller to a final OD of ∼20 μm and affixed to an automated injection system pressured by compressed gas (Harvard Apparatus). Pipettes were manually controlled with a micropipette manipulator. A total volume of 0.5 μl was injected into the left ear of each mouse. After all procedures, mice were placed on a heating pad for recovery and rubbed with bedding before being returned to the mother. Recovery was closely monitored daily for at least 5 days post-operatively.
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4

Whole-Cell Patch-Clamp Analysis of pH-Gated Ion Channels

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All experiments were performed in the whole-cell patch-clamp configuration 16–48 h after transfection as described earlier. Borosilicate glass pipettes (Harvard Apparatus) pulled to a resistance of 2–6 MΩ (P-1000; Sutter Instrument) and filled with an internal solution containing (in mM): 20 EGTA, 10 HEPES, 50 CsCl, 10 NaCl, and 60 CsF, pH 7.2. Extracellular solution contained (in mM): 110 NaCl, 5 KCl, 40 NMDG, 10 MES, 10 HEPES, 5 glucose, 10 Trizma base, 2 CaCl2, and 1 MgCl2, and pH was adjusted as desired with HCl or NaOH. An Axopatch 200B amplifier and pCLAMP 10.6 (Axon Instruments) were used to record whole-cell currents. Recordings were performed at a holding potential of −80 mV with a 5-kHz low-pass filter and sampling at 10 kHz. Channel activation was performed via a rapid change in solution from a resting pH 8.0 to pH 5.5 (unless indicated otherwise) for 5 s. Following activation of the channel by pH 5.5 solution, pH was returned to the resting pH (8.0) for 9 s, and protocol was repeated for a total of six activations. Rapid perfusion was achieved using a SF-77B Fast-Step perfusion system (Warner Instruments). Fluorescence was visualized on an Olympus IX73 microscope (Olympus) with a CoolLED pE-4000 illumination system (CoolLED).
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5

Electrophysiological Recording of Action Potentials

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Borosilicate glass pipettes (Harvard Apparatus) were pulled with a Sutter puller, fired polished, and had a resistance between 1–2 MΩ. Series resistance was compensated up to 50% and was continually monitored during the experiment. The composition of the standard extracellular solution used to record APs was (mM): NaCl, 140; KCl, 4; CaCl2, 1.8; MgCl2, 1.1; HEPES, 10; glucose, 10; pH 7.4 (LiOH). When APs were recorded, the pipette solution contained (mM): KCl, 135; MgCl2, 4; Ethylene glycol-bis (2-aminoethyl ether)-N, N, N’, N’-tetraacetic acid (EGTA), 10; Glucose 10; HEPES, 10; Na2-ATP 5; Na2-CP 3, pH 7.2 (LiOH). In a current-clamp configuration, action potential was measured in response to brief depolarizing current (1–2 ms) injections at 1 Hz as described (18 (link)).
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6

Whole-cell patch-clamp recording of ion channels

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All experiments were performed in the whole-cell patch-clamp configuration 16–48 h after transfection. Borosilicate glass pipettes (Harvard Apparatus) were pulled to a resistance of 2–6 MΩ (P-1000; Sutter Instrument) and filled with an internal solution containing (in mM) 20 EGTA, 10 HEPES, 50 CsCl, 10 NaCl, and 60 CsF, pH 7.2. Extracellular solution contained (in mM) 110 NaCl, 5 KCl, 40 NMDG, 10 MES, 10 HEPES, 5 glucose, 10 Trizma base, 2 CaCl2, and 1 MgCl2, and pH was adjusted as desired with HCl or NaOH. An Axopatch 200B amplifier and pCLAMP 10.6 (Axon Instruments) were used to record whole-cell currents. Recordings were performed at a holding potential of −80 mV with a 5-kHz low-pass filter and sampling at 10 kHz. Solution changes were performed through rapid perfusion using a SF-77B Fast-Step perfusion system (Warner Instruments). Fluorescence was visualized on an Olympus IX73 microscope with a CoolLED pE-4000 illumination system.
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7

Patch-Clamp Recording of MVN Neurons

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MVN neurons identified visually by location, size and fluorescence were recorded using borosilicate glass pipettes of external diameter 1.2 mm/internal diameter 0.69 mm (Harvard Apparatus) pulled from Flaming/Brown micropipette puller (Model P-97, Sutter Instrument) and filled with high chloride internal solution (in mM): 140 CsCl, 10 HEPES, 1 EGTA, 2 MgCl2, 2 Na2ATP, and 1 Na2GTP (adjusted to pH 7.2, 290 mOsm). The advancement of the pipette was manually operated through the micromanipulator (Sutter Instrument).
Signals were amplified using MultiClamp700A (Axon Instruments) and acquired through a 16-bit data acquisition system (DIGIDATA 1322A; Axon Instruments). During whole-cell patch-clamp recording, membrane potentials were corrected for the liquid junction potential (10 mV), and the change of series resistance was sustained within 15%. Only recordings with series resistance smaller than 15 MΩ were included for subsequent analysis. Cell recording was discarded if the leaking currents went beyond 200 pA. The signals of the recording were digitized at 10 kHz and filtered at 3 kHz by the Multiclamp 700A amplifier, DIGIDATA 1322A analog/digital interface board and pCLAMP 10.2 software (Axon Instruments). Data were captured by Clampex 10.2/Multiclamp Commander 1 (Axon Instruments) package.
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8

Electrophysiological Recordings Using Borosilicate Glass Pipettes

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Borosilicate glass pipettes (Harvard Apparatus, Holliston, MA, USA) with resistance of 1.5–3 MΩ were fabricated using a PC-100 vertical Micropipette Puller (Narishige International Inc., East Meadow, NY, USA). Recordings were obtained using an Axopatch 200B amplifier (Molecular Devices, Sunnyvale, CA, USA). Membrane capacitance and series resistance were estimated using the dial settings on the amplifier, and capacitive transients and series resistances were compensated by 70–80%. Data acquisition and filtering occurred at 20 and 5 kHz, respectively, before digitization and storage. Clampex 9 software (Molecular Devices) was used to set experimental parameters, and electrophysiological equipment was interfaced to this software using a Digidata 1200 analog–digital interface (Molecular Devices). Analysis of electrophysiological data was performed using Clampfit 11 software (Molecular Devices) and GraphPad Prism 8 software (La Jolla, CA, USA). Results were expressed as mean ± standard error of the mean (SEM). Except where otherwise noted, statistical significance was determined using a Student’s t-test comparing cells treated with vehicle (DMSO) or PW201, with p < 0.05 being considered statistically significant.
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9

Patch-Clamp Recordings of SF-1 Neurons

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For hippocampal slice LTP recordings procedure, please refer to the method of our previous study [14 (link)].
Whole-cell patch clamp recordings were obtained from SF-1 neurons in the hypothalamus of ScKO mice and control mice using 4 to 8 MΩ borosilicate glass pipettes (Harvard Apparatus). The pipette recording solution contained (in mmol 1−1): 8.0 NaCl, nominally 0.0001 CaCl2, 0.3 Na-GTP, 130 potassium gluconate, 10.0 Na-Hepes, 1.0 MgCl2, and 2.0 Na-ATP (pH adjusted to 7.4 with methanesulfonic acid; 295 to 300 mosmol 1−1). The pipettes with an Ag–AgCl electrode were connected to a CV-4 head stage and an Axopatch-1D amplifier with a Digi data 1200 interface (Axon Instruments). The pipettes are positioned within the tissue using a motorized patch-clamp micromanipulator. Seal resistance was typically 4 to 10 GΩ. Typical whole-cell access resistance (Ra) was 5 to 30 MΩ and whole-cell leak was below 20 pA [43 (link)]. Miniature excitatory postsynaptic currents (mEPSCs) and miniature inhibitory postsynaptic currents (mIPSCs) were recorded in the presence of tetrodotoxin (500 nmol/L). We recorded mEPSCs and mIPSCs at holding potentials of –70 and 0 mV, respectively, in the same cell (3 min each; n > 20 cells/group).
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10

Patch-Clamp Electrophysiology Protocols

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Borosilicate glass pipettes (Harvard Apparatus, Holliston, MA, USA) with resistance of 3 – 5 MΩ were fabricated using a PC-100 vertical Micropipette Puller (Narishige International Inc., East Meadow, NY, USA). Recordings were obtained using an Axopatch 200B amplifier (Molecular Devices, Sunnyvale, CA, USA). Membrane capacitance and series resistance were estimated using the dial settings on the amplifier, and capacitive transients and series resistance were compensated by 70–80%. Data acquisition and filtering occurred at 20 and 5 kHz, respectively, before digitization and storage. Clampex 9 software (Molecular Devices) was used to set experimental parameters, and electrophysiological equipment was interfaced to this software using a Digidata 1320A analog–digital interface (Molecular Devices). Analysis of electrophysiological data was performed using Clampfit 11 software (Molecular Devices) and GraphPad Prism 8 software (La Jolla, CA, USA). Results were expressed as individual replicates with SEM error bars. Statistical significance was determined using a one-way ANOVA with post hoc Tukey’s multiple comparisons test, with p < 0.05 being considered statistically significant.
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