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12 protocols using tc insert

1

Murine Brown Adipocyte-Endothelial Co-Culture

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Murine brown adipocytes were seeded and differentiated in the lower chamber of a transwell system. On day seven of the brown adipocyte differentiation protocol (Haas et al., 2009 (link)), murine microvascular endothelial cells (InSCREENex GmbH) seeded in a 0.4 µM pore size TC-insert (Sarstedt) were added on the top of the adipocytes. Both brown adipocytes and endothelial cells were (co-)cultured for 4 hours in a media containing 50% differentiation media (DMEM Glutamax (ThermoFisher Scientific) supplemented with 10% FBS, 100 IU/ml penicillin, 100 μg/ml streptomycin, 20 nM insulin, 1 nM triiodothyronine) and 50% endothelial cell media (InSCREENex GmbH) with or without 10 µM CL316,243. RNA was isolated from brown adipocytes and endothelial cells separately.
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2

Monocyte Migration Capacity Evaluation

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Migratory capacity was evaluated immediately after monocyte isolation and after cultivation for 24 h with or w/o GM-CSF. First, monocytes were harvested and adjusted to a final concentration of 5 × 106 cells/mL. Subsequently, 100 µL of the adjusted cell suspension was seeded into 5 µm TC-Insert (Sarstedt, Nümbrecht, Germany). The inserts were placed in a 24-well culture plate (Greiner-Bio-One, Leipzig, Germany), and on the outside of the inserts, 500 µL supplemented cell culture medium with or w/o monocyte chemoattractant protein-1 (MCP-1) (25 ng/mL, R&D Systems, Minneapolis, MN, USA) as chemoattractant was added. After 2.5 h incubation at 37 °C and 5% CO2, the transwell chamber was removed. Subsequently, the number of cells migrated to the outside of the chamber was measured in the supernatant. The migratory capacity was expressed as the percentage of cells which migrated from the upper chamber to the lower chamber.
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3

Transwell Migration Assay for MTT Cells

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The ability of MTT cells to migrate through 8-μm pores was measured by using TC Inserts (Sarstedt; Item No. 83.3931.800). Cells (5 × 106) were plated in cell culture flasks (T75). After 24 h, the medium was removed and DMEM + GlutaMAX containing 0.2% BSA was added, followed by 24 h of incubation. Cells were washed with PBS, trypsinized and diluted in DMEM containing 0.2% BSA up to a concentration of 1 × 106/ml. As a chemoattractant, complete DMEM + GlutaMAX (10% HS, 5% FCS, 1 mM sodium pyruvate) was filled in each well of a 12-well plate and the single cell suspensions (2 × 105 cells/insert) were added in the upper compartment of the cell culture insert. After 24 h of incubation, culture medium was replaced by DMEM + GlutaMAX (0.2% BSA) containing 1 μM calcein for 1 h at 37 °C (BD™ Calcein AM Fluorescent Dye, BD Biosciences). Afterwards, the lower compartment was washed with PBS and migrated cells were trypsinized. The fluorescence of calcein-stained cells was measured at 485Ex/528Em by Victor3 1420 Multilabel Counter (PerkinElmer).
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4

Osteogenic Differentiation of hBMSCs

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Undifferentiated human bone-marrow-derived mesenchymal stem cells (hBMSC, ATCC-PCS-500-012) were cultured in mesenchymal stem cell basal medium (BM, ATCC PCS500030) supplemented with 7% FBS, 100 IU/mL penicillin/streptomycin, 2.4 mM, 125 pg/mL FGF-b, and 15 ng/mL IGF-1 (ATCC, Milan, Italy), at a density of 5 × 103 cells/cm2 and incubated for 24 h at 37 °C under 5% CO2. To induce osteogenic differentiation, hBMSC were cultured in osteogenic medium (OM), (DMEM with 10% FBS, 100 IU/mL penicillin/streptomycin, 2 mM L-glutamine (Corning, Manassas, VA, USA), 10 mM β-glycerophosphate (BGP), 100 nM dexamethasone, 100 μM ascorbic acid 2-phosphate (AA) (Sigma Chemical Co., Milan, Italy), or cultured in BM with the presence of implant plus CGF supplemented with 7% FBS, 100 IU/mL penicillin/streptomycin, 10 mM BGP, and 100 μM AA (Device) for 21 days. The medium was replaced at a rate of 50% every 3 days. In all experiments, the implant coated with CGF was placed into a sterile transwell insert (TC-inserts, Sarstedt, Nümbrecht Germany) with a semipermeable membrane at the bottom (pores of 0.4 μm) and inserted into the 12-well culture plates (an insert in each well).
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5

Differentiation of Airway Epithelial Cells

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ALIs were
grown on 24-well Tissue Culture (TC) Inserts (Sarstedt, 83.3932.041)
with a pore size of 0.4 μm and a pore density of 2 × 106 pores/cm2 (Figure S1). The TC inserts were precoated with matrix proteins from 804G conditioned
medium, and the apical compartment of each was seeded with 100,000
basal cells in 300 μL of basal cell expansion medium (Table S1). Basal cell medium (800 μL) was
also added to the basolateral compartments of the wells. The cells
were incubated at 37 °C and 5% CO2 for 24–48
h until a confluent layer had formed. The culture medium was then
removed from the apical and basolateral compartments, and 500 μL
of ALI medium (Table S2) was added to the
basolateral compartment of the wells while the apical compartment
was left empty. This step is referred to as the air-lift. The cells
were incubated for a further 21 days (medium refreshed every 48–72
h) following the air-lift to achieve differentiation into a pseudostratified
epithelium.
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6

Transepithelial Transport Evaluation Protocol

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hAEC cultures were prepared on Transwell inserts (Corning, Glendale, AZ) as described above. Before the transcytosis assay, the functionality of the tight junctions was tested by measuring the transepithelial electrical resistance (TEER). MDCK II cells were seeded on TC inserts (Sarstedt) with a porous membrane (0.4 μm pore diameter, 2x106 pores/cm2, and 12 μm thickness). The inserts were placed in a 24-well plate with medium and incubated at 37°C with 5% CO₂. The functionality of the tight junctions was assessed at increasing days post-seeding with B19V (3x109) at pH 7.4, where no interaction with globoside is possible, and with bacteriophage PP7 (3x1010), which does not interact with eukaryotic cells. PP7 RNA was quantified by RT-PCR as previously described [14 (link)].
Cells were washed once with PBS and layered with 200 μl of apical buffer consisting of PiBS pH 6.1 (20 mM piperazine-N,N′-bis[2-ethanesulfonic acid], 121 mM NaCl, 2.5 mM KCl) or MEM. The inserts were placed in a 24-well plate with 600 μl MEM. To quantify viruses in the apical and basolateral compartments, 50 μl medium was harvested and used for DNA extraction and quantification by qPCR, as described above. Results were normalized for the differences in volume between apical and basolateral compartments.
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7

Matrigel Invasion Assay Protocol

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An invasion assay was performed using the thin gel method according to previous studies [41 ] and the manufacturer’s protocol. TransWell hanging inserts (24 wells) were purchased from TC inserts (SARSTEDT) and coated with 35 μL Matrigel matrix. A total of 3.5 × 104 cells per well were starved for 24 hr in advance and then seeded into the upper chamber in growth medium containing 1% FBS, while the lower chambers of the TC Plate (SARSTEDT) were loaded with 1,000 μL of complete growth medium containing 10% FBS. To count the number of invaded cells, Matrigel and non-invaded cells were removed from the upper surface of polycarbonate filters embedded at the bottom of the inserts using cotton swaps. Cells adhering to the underside of filters were fixed using 4% paraformaldehyde. After staining with Giemsa, invaded cells were counted in three random microscopic fields for each insert. The invasion assay was repeated in three independent experiments. To analyze cells invading Matrigel, Matrigel and the filters were cut en bloc and subjected to immunofluorescence staining.
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8

B19V Entry Inhibition Assay

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All drugs were purchased from Sigma. Pitstop 2 and genistein were dissolved in DMSO, whereas chlorpromazine (CPZ), methyl-β-cyclodextrin (mβCDX), and dynasore were dissolved in water. Briefly, MDCK II cells were seeded in TC inserts (Sarstedt). The cells were pre-treated with the inhibitors at pH 7.4 and incubated at 37°C for 1 h. Next, the cells were incubated with the drugs and B19V (3x109) in PiBS (pH 6.1) at 37°C to allow virus attachment and uptake. After 3h, the cells were washed with PBS (pH 7.4) to remove attached but not internalized viruses. B19V was detected in cells by IF with an antibody against capsids and quantified in the basolateral compartment by qPCR, as described above.
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9

In Vitro Cell Invasion and Migration Assays

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Cell invasion was assayed in Corning BioCoat™ Matrigel Invasion chambers (24-well, 8-µm pores, Corning) according to the manufacturer's protocol. Briefly, 2.5 × 10 4 cells were seeded in triplicate on the cell culture inserts. After 24 h, cells that had passed to the opposite side of the membrane were fixed with 100% methanol and 1% toluidine blue. Eight microscopic fields were randomly selected for cell counting.
Cell migration was assayed with TC-inserts (SARSTEDT, Numbrecht, Germany) according to the manufacturer's protocol. Briefly, 1.5 × 10 4 cells were seeded in triplicate on the cell culture inserts. After 24 h, cells that had passed to the opposite side of the membrane were fixed with 100% methanol and 1% toluidine blue. Eight microscopic fields were randomly selected for cell counting.
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10

Modulating T cell activation by iNKT cells

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Major mismatched mo-DC or blood DC were plated together with allogeneic CD3+ T cells at a 1:1 ratio. Culture-expanded iNKT cells were added to the MLR at different doses, either directly or separated from the MLR by 0.4 μm TC-Inserts (Sarstedt, Nuembrecht, Germany). Cells were analyzed by flow cytometry for activation markers (CD69 and CD25) and proliferation (CFSE). Alternatively, T cells were incubated with anti-CD3/CD28-coated beads (ThermoFisher Scientific, Waltham, MA, USA) in the presence or absence of iNKT cells. For blocking assays, iNKT cells or DC were pre-treated with the respective antibodies or IgG control (Online Supplementary Appendix).
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