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7 protocols using rpmi 1640 culture medium

1

Isolation of Neutrophils and PBMCs

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Neutrophils and PBMCs were isolated from human buffy coats by dextran sedimentation, erythrocyte lysis, and centrifugation in a Ficoll-Hypaque gradient (PAA Laboratories, Pasching, Austria), as previously described [13 (link)]. After isolation, the cells were suspended in RPMI 1640 culture medium (BioWest, Nuaillé, France), (Ca2+)-free phosphate-buffered saline (PBS; Thermo Fisher Scientific, Waltham, MA, USA), or (Ca2+)-free Hanks’ balanced salt solution (HBSS; Sigma-Aldrich, St. Louis, MO, USA), depending on the test, and were stored at 4 °C until use. The buffy coats for the study were purchased from the Warsaw Regional Blood Centre. Peripheral venous blood for fractionation and preparation of buffy coats was collected in the centre from healthy male volunteers (ages 18–35 years). The donors were non-smokers, clinically recognised as healthy, and did not take any medications. The study complied with the principles of the Declaration of Helsinki. As it used a by-product material available on the market, it did not require the approval of the bioethics committee.
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2

Monocyte Adhesion Assay in HAEC

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Monocyte adhesion to HAEC exposed to the different experimental conditions was tested in the presence and in the absence of TNF-α (5 mmol/l, 24 h). Briefly, human monocytes THP-1 were kindly donated by Dr. Magdalena Paolino (Karolinska Institute; Stockholm, Sweden) and grown in RPMI-1640 culture medium (Biowest; Nuaillé, France) supplemented with 10% FBS, 2 mol/l L-glutamine, 4,5 g/l glucose, and 1% penicillin/streptomycin, following the supplier’s recommendations. THP-1 cells were stained with 2 μmol/l of CalceinAM fluorescent dye (Abcam) in serum-free media at 37 °C for 30 min, and washed with 10 mL of PBS. Stained cells were then resuspended in EBM2:RPMI-1640 medium (1:1), supplemented with 10% FBS, and co-cultured with HAEC under rotating conditions for 1 h at 37 °C. After incubation, non-adhering cells were removed with PBS and monolayers were fixed with 1% PFA. Co-cultures were observed under confocal microscopy and the number of adherent THP-1 cells was determined with ImageJ software.
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3

Flow Cytometry Characterization of DCs and Lymphocytes

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The monoclonal antibodies for the characterization of DC and lymphocytes by flow cytometry were the following: anti-CD3 FITC, anti-CD4 APC, anti-CD8 PE, anti-CD137-biotin, anti-CD11c APC, anti-CD40-PE, anti-CD86-PE, anti-CD80-PE, anti-F4/80-Cy5 and anti-Ia/Ie-FITC from Biolegend (San Diego, CA, USA). The murine melanoma cell line B16-F10 with haplotype H-2Kb was purchased from The American Type Culture Collection, USA. RPMI-1640 culture medium was purchased from Biowest (Nuaille, France). Ge from bovine skin with a protein percentage of 78% and a water content of 8% was used. HA sodium salt from Streptococcus equi, both from SIGMA (St Louis, MO, USA) with a solubility of 5 mg/mL and an MW of ~1.5–1.8 × 106 Da was used.
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4

Multifunctional Nanoparticle Synthesis

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5-Fu, potassium permanganate
(KMnO4), phosphoric acid (H3PO4), N,N′-dicyclohexylcarbodiimide
(DCC), graphite powder, 4-dimethylaminopyridine (DMAP), potassium
ferrocyanide(II) trihydrate (K4[Fe(CN)6]·3H2O), hydrochloric acid (HCl), and formaldehyde (CH2O) solution were obtained from Sigma (St Louis, USA). Ferrous chloride
(FeCl2·4H2O), ferric chloride (FeCl3·6H2O), 1-ethyl-3-(3-dimethylaminopropyl)carbodiimide
(EDC), LMWC, PCL, dimethylformamide (DMF), N-hydroxysuccinimide
(NHS), ammonia solution (25 vol %), dichloromethane, hydrogen peroxide
(H2O2), Span60, and Tween60 were obtained from
Merck (Darmstadt, Germany). Roswell Park Memorial Institute (RPMI)
1640 culture medium, fetal bovine serum, and trypsin–ethylenediamine
tetraacetic acid were provided from Biowest (Spain). The CT-26 (mouse
colon cancer) cell line was purchased from the Pasteur Institute of
Iran.
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5

Macrophagic Mouse Cell Line P388D1 Culture

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Macrophagic mouse cell line P388D1 (ATCC, Manassas, VA, USA) previously isolated from a mouse lymphoma was maintained in RPMI 1640 culture medium (Biowest®, Nuaillé, France) supplemented with 10% inactivated fetal bovine serum (FBS, BioWest®), 100 U·mL−1 of penicillin and 100 μg·mL−1 of streptomycin (Sigma-Aldrich®, St. Louis, MO, USA), pH 7.2, at 37 °C in a humid atmosphere with 5% CO2. Cells were centrifuged at 300× g for 10 min and transferred to a fresh medium supplemented with 10% exosome-depleted inactivated FBS (exo-free FBS, Exosome-Depleted Fetal Bovine Serum, Gibco, Waltham, MA, USA) to be used in the following assays.
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6

Macrophage Differentiation and Activation

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THP-1 cells were purchased from ATCC (Manassas, VA, USA) and grown in RPMI-1640 culture medium (Biowest, France) supplemented with FBS (10%), L-glutamine (2 mM), glucose (4,500 mg/L), and penicillin/streptomycin (1%) (Sigma-Aldrich, Spain), following the supplier’s recommendation. To induce macrophage differentiation, THP-1 cells were transferred to RPMI-1640 medium supplemented with FBS (3%), L-glutamine (2 mM), glucose (4,500 mg/L), and penicillin/streptomycin (1%); seeded in 12-well plates at 2 × 105 cells/mL; and treated with phorbol 12-myristate 13-acetate (PMA, 10 ng/mL) (Sigma-Aldrich) for 48 h. Differentiated macrophages were then exposed to TNF-α (5 nM) or vehicle for 24 h. At the end of the experiments, cells were harvested and cell culture supernatants collected for miR-223-3p determination.
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7

HL-60 Cell Differentiation into Macrophages

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For the in vitro model, we used the HL-60 (ATCC® CCL-240™, Manassas, VA, USA) cell line from a human’s promyelocytic leukemia [83 (link)]. These cells were first cultured in suspension in complete culture medium (CCM) consisting of RPMI 1640 culture medium (Biowest, Nuaillé, France) containing 10% fetal bovine serum (Biowest, Nuaillé, France) and 1% penicillin/streptomycin (GIBCO, Invitrogen, Paisley, UK) into an incubator at 37 °C in 5% CO2.
Once the cells were growing at an exponential rate, they were differentiated into macrophage-like cells by culturing them in 96-well plates at 2 × 105 cells/well in 100 μL of CCM in the presence of 0.1 μg mL−1 phorbol myristate acetate (PMA) for 24 h. The cells were then reconditioned by changing the previous medium for 100 µL of fresh CCM, and once again incubated under the same conditions for another 24 h.
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