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Rho kinase inhibitor y 27632

Manufactured by Merck Group
Sourced in Australia

Rho Kinase inhibitor Y-27632 is a chemical compound that specifically inhibits the activity of the Rho-associated protein kinase (ROCK) enzyme. ROCK plays a key role in regulating cellular processes such as actin cytoskeleton organization, cell adhesion, and cell migration. Y-27632 has been widely used as a research tool to study the biological functions of ROCK in various experimental models.

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14 protocols using rho kinase inhibitor y 27632

1

Maintenance of HUES66 Human Embryonic Stem Cells

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HUES66 human embryonic stem cells (hESCs) were maintained according to the Enhanced Culture Platform, which is less prone to spontaneous differentiation and aids in culturing hESCs as single cells for selection after genome engineering (Lu et al., 2019 (link); Peters et al., 2013 ; Schinzel et al., 2011 (link)). Briefly, hESCs were maintained in Essential 8 media (ThermoFisher) supplemented with 100 μg/mL Normocin (InvivoGen) and cultured in standard tissue culture dishes coated with Geltrex (ThermoFisher) at 37 °C in 5% CO2. For passaging, the cells were dissociated using Accutase (STEMCELL). When subculturing or growing at very low density, we added 10 μM Rho kinase inhibitor Y-27632 (MilliporeSigma) to the culture medium to increase survival.
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2

Maintenance of HUES66 Human Embryonic Stem Cells

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HUES66 human embryonic stem cells (hESCs) were maintained according to the Enhanced Culture Platform, which is less prone to spontaneous differentiation and aids in culturing hESCs as single cells for selection after genome engineering (Lu et al., 2019 (link); Peters et al., 2013 ; Schinzel et al., 2011 (link)). Briefly, hESCs were maintained in Essential 8 media (ThermoFisher) supplemented with 100 μg/mL Normocin (InvivoGen) and cultured in standard tissue culture dishes coated with Geltrex (ThermoFisher) at 37 °C in 5% CO2. For passaging, the cells were dissociated using Accutase (STEMCELL). When subculturing or growing at very low density, we added 10 μM Rho kinase inhibitor Y-27632 (MilliporeSigma) to the culture medium to increase survival.
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3

Microtubule and Actin Depolymerization

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To depolymerize, MT cells were treated with nocodazole (Sigma-Aldrich) in the concentration of 13.2×10−6 М. To stabilize microtubules 100 nM nocodazole and 50 nM paclitaxel (Sigma-Aldrich) were simultaneously added to the culture medium. For inhibition of non-muscle myosin II, blebbistatin (Sigma-Aldrich) (45 µM) and Rho-kinase inhibitor Y-27632 (Sigma-Aldrich) (10 µM) were used. For inhibition of actin polymerization, 30 nM of cytochalasin D (Sigma-Aldrich) was added to the cell suspension prior to plating.
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4

Establishment and Evaluation of PDAC Organoids

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Human neoplastic organoid cultures were established from resected PDAC specimens. Specimens from pancreatic resections were digested enzymatically with collagenase/dispase dissociation and then plated in Matrigel to generate pancreas organoid cultures, in human complete medium [25 (link)]. PDAC organoids were then maintained in human complete medium. For the 50% of cell growth inhibition (IC50) analysis, organoids were dissociated into single cells by first triturating them in media through a fire-polished glass pipette, and then by enzymatic dissociation with 2 mg/ml dispase dissolved in TrypLE (Life Technologies). Cells were counted and diluted to 10 cells/μl in a mixture of complete media, Rho Kinase inhibitor Y-27632 (10.5 μM final concentration, Sigma) and Growth factor-reduced Matrigel (GFR-Matrigel, 10% final concentration). 100 μl of this mixture (1000 cells/well) was plated in 96-well plates (Nunc), whose wells had been previously coated with a bed of GFR-Matrigel to prevent attachment of the cells to the bottom of the plate. Cell viability in response to the different drugs was measured using the CellTiter-Glo assay (Promega Corporation) and Synergy 4 reader (Biotek).
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5

Routine Culture of Common Cell Lines

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Human Embryonic Kidney (HEK) 293T, Hela, HepG2 and U2OS cells were maintained in Dulbecco’s Modified Eagle’s Medium (DMEM, Life Technologies), with 10% fetal bovine serum (FBS, BenchMark), 100 U/mL penicillin, and 100 μg/mL streptomycin (Life Technologies) at 37 °C with 5% CO2. HEK 293T, Hela, HepG2 and U2OS cells were obtained from American Type Culture Collection (ATCC). hES-H9 cells were maintained in mTeSR1 medium (StemCell Technologies) at 37 °C with 5% CO2. Culture plates were pre-coated with Matrigel (Corning) 12 hours prior to use. Wash the plates with PBS for 3 times before seeding the cells. 10 μM Rho Kinase inhibitor Y27632 (Sigma) was added for the first 24 hours after each passaging. Culture media was changed every 24 hours.
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6

Evaluating Biologics and Small Molecules

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Infliximab (IFX), Etanercept (ETN), Certolizumab Pegol (CZP) were provided by Mitsubishi Tanabe Pharma Corporation (Osaka, Japan), Takeda Pharmaceutical Company Limited (Osaka, Japan) and UCB Japan (Tokyo, Japan), respectively. Methotrexate and folic acid were obtained from Wako Chemicals (Osaka, Japan). Rho kinase inhibitor, Y27632, and PKH-26 were supplied from Sigma (St. Louis, MO, United States). TO-PRO-3 was from Thermo Fisher Scientific (Waltham, MA, United States). Rabbit anti-phospho JNK monoclonal antibody (mAb) and anti-JNK polyclonal antibody (Ab) were purchased from cell signaling technology (Danvers, MA, United States). Anti-GAPDH Ab was from Gene Tex (Irvine, CA, United States).
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7

Keratinocyte Response to S. aureus Secretome

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HaCaT cells were cultured in DMEM medium supplemented with 10% fetal calf serum (FCS) and 100 U/mL penicillin/streptomycin at 37°C and 5% CO2. HaCaT experiments were performed up to passage 30 in serum-free culture conditions using DermaLife K keratinocyte basal medium (Lifeline; SKU: LL-0007). Primary human keratinocytes were isolated from abdominal skin, foreskin, or actinic keratosis lesions collected at the Princess Alexandra Hospital Dermatology Centre (Brisbane, Australia) with patient consent and institutional approval (HREC/11/QPAH/477). Primary keratinocytes were cultured in DermaLife K keratinocyte basal medium supplemented with 10 μM Rho Kinase inhibitor Y-27632 (Sigma Aldrich; SCM075). Experiments on primary keratinocytes were performed up to passage eight. For S. aureus secretome stimulation assays, keratinocytes were seeded in 96-well plates and, unless otherwise stated, experiments were initiated at approximately 70% cell confluence. The keratinocytes were then incubated with sterile culture supernatant of S. aureus and bacterial medium control, diluted 1:40 in DermaLife medium, for 24 h. By end point, keratinocyte cultures reached confluence and cell supernatant was collected for cytokine quantification and the cell viability assessed as described below in 4.8 and 4.9, respectively.
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8

RhoA Pathway Inhibition in Cell Culture

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786.0 [33] (link) and RCC10 [34] (link) were cultured in DMEM supplemented with 10% FCS and 1% penicillin/streptomycin at 37°C in a humidified atmosphere of 7.5% CO2. For inhibition of the RhoA pathway, cells were treated with the Rho inhibitor C3 transferase at a final concentration of 0.1 µg/ml (Cytoskeleton Inc., Denver, CO) or the Rho-Kinase inhibitor Y-27632 (Sigma-Aldrich, Steinheim, Germany) at a final concentration of 1 µM.
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9

Establishing Patient-Derived Xenograft (PDX) Model

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Procedure was performed with an approved protocol from Fox Chase Cancer Center Institutional Review Board and was done as previously described [112 (link)]. Briefly, tumor fragments were obtained after surgery and washed in RPMI media. The washed fragments were then resuspended in 1:1 mixture of RPMI and Matrigel on ice and were implanted subcutaneously into 5–8 week old C-B17.scid mice (Taconic Bioscience). Once tumors developed to a size of at least 150 mm3, but no larger than 1,500 mm3, mice were sacrificed, and the tumors were collected. These tumors were then digested with a solution containing collagenase/hyaluronidase, and dispase (StemCell Technologies, Cambridge, MA). After several washes, dissociated PDX cells were plated in DMEM supplemented with 10% FBS, 1% penicillin/streptomycin, and 2 mM glutamine. All of the following reagents were from Thermo Fisher Scientific (Waltham, MA) and supplemented into the media: F12 nutrient mix, 5 μg/mL insulin, 25 μg/mL hydrocortisone, 125 ng/mL EGF, 250 μg/mL fungizone, 10 μg/mL gentamycin,10 mg/mL nystatin, 11.7 mmol/L cholera toxin, and 5 mmol/L Rho kinase inhibitor Y27632 (Sigma-Aldrich, St. Louis, MO). After 1 month of passages, cells were lysed and subjected to western blot analysis for the detection of NGL-1 expression.
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10

Exploring S. aureus Secretome Effects on Keratinocytes

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Primary human keratinocytes were isolated from abdominal skin and foreskin collected at the Princess Alexandra Hospital Dermatology Centre (Brisbane, Australia) with patient consent and institutional approval (HREC/11/QPAH/477). Primary keratinocytes were cultured in serum-free DermaLife K keratinocyte basal medium supplemented with 10 µM Rho Kinase inhibitor Y-27632 (Sigma Aldrich, Castle Hill, NSW, Australia; SCM075). Experiments on primary keratinocytes were performed up to passage eight. To explore the effects of S. aureus secreted compounds on human keratinocytes, the keratinocytes were cultured in S. aureus secretome, or DSM as control, diluted in antibiotic-free DermaLife medium. The MTT assay was used to establish the dose of S. aureus secretome that did not compromise cell viability and growth.
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