The largest database of trusted experimental protocols

Mouse anti vimentin

Manufactured by Santa Cruz Biotechnology
Sourced in United States, United Kingdom

Mouse anti-vimentin is a monoclonal antibody that recognizes the vimentin protein, which is a type III intermediate filament found in various cell types. This antibody can be used for the detection and analysis of vimentin expression in research applications.

Automatically generated - may contain errors

32 protocols using mouse anti vimentin

1

Murine Airway Epithelial Cell Culture

Check if the same lab product or an alternative is used in the 5 most similar protocols
Mouse AEC cultures were prepared from female C57BL/6 mice as previously described22 (link), with minor modifications. Briefly, lungs from mice were digested in 1.5 mg/ml Pronase (Roche, USA), 0.1 mg/ml DNase I (Sigma-Aldrich, USA) for 1 hr at 37°C in 5% CO2. Single cell suspensions were incubated with purified rat anti-mouse CD45 antibody (BD Biosciences, USA) and epithelial cells negatively enriched with BioMag goat anti-rat Ig-coupled magnetic beads (Qiagen, USA). Cells were cultured on collagen-coated (MP Biomedicals, USA) plates in DMEM/F-12 media (Gibco, USA) supplemented with 10% FCS, 2 mM L-glutamine, 100 U/ml penicillin, 100 μg/ml streptomycin and 5 μg/ml insulin (Sigma-Aldrich). To confirm cell purity, monolayers were detached with 3 mM EDTA and cells stained with mouse anti-EpCAM antibodies (BioLegend, USA) and examined by flow cytometry. Cell monolayers were negative for the presence of fibroblasts (anti-mouse vimentin (Santa Cruz, USA)). Monolayers were infected with the HKx31 strain of IAV (H3N2, MOI 1) in serum free DMEM/F-12 for 1 hr and then washed and incubated in DMEM/F-12 supplemented with 2% FCS and 4 μg/ml trypsin for 24 or 48 hrs.
+ Open protocol
+ Expand
2

Immunocytochemistry of AMTN in ARPE-19 cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Serum starved and AMTN knock-down ARPE-19 cells cultured in six-well chambers or transwell inserts were washed with cold PBS, then fixed with 4% paraformaldehyde (PFA) for 10 min at room temperature, and permeabilized with 0.1% Triton X-100 for 5 min. Next, the samples were blocked with 5% BSA for 30 min at room temperature. Cells were incubated with primary antibodies, rabbit polyclonal ZO-1 (Abcam, Cambridge, MA) diluted 1:100 in ICC buffer (1x PBS with 0.2% Tween 20, 0.5% BSA, and 0.05% sodium azide), Anti-Amelotin antibody (Catalog#ab122312, Abcam, Cambridge, MA) diluted 1: 100 in ICC buffer, anti-CRALBP (Thermo Fisher Scientific, Waltham, MA) diluted 1:500 in ICC buffer, or anti-mouse Vimentin (Santa Cruz) diluted 1:100 dilution in ICC buffer for four hours at room temperature. The antibody solution was removed, and the cells were washed with PBS. Next, samples were incubated with the anti-rabbit or anti-mouse Alexa 488 (Thermo Fisher Scientific, Waltham, MA) secondary antibody diluted 1:100 with PBS for two hours at room temperature. Slides were counter stained with DAPI (#D1306, Thermo Fisher Scientific, Waltham, MA) diluted 1:500 in PBS in the dark for one hour. After washing with 1X PBS, samples were mounted with Prolong Gold (Molecular Probes, Eugene, OR) mounting medium and examined by confocal microscopy using a Zeiss LSM 880 with Airyscan (Zeiss, USA).
+ Open protocol
+ Expand
3

Immunofluorescence Microscopy of Cell Markers

Check if the same lab product or an alternative is used in the 5 most similar protocols
Immunofluorescence microscopy was performed to determine the TNFI, TCFI and PCC as previously described69 (link),70 (link). PCC values were determined by the strength of the relationship between two fluorochrome signals. Primary antibodies were: anti-rabbit-LSD1 (05–939; Merck Millipore), anti-goat-SNAI1 (sc-10433; Santa Cruz), anti-mouse-E-cadherin (sc-21791; Santa Cruz), anti-mouse-vimentin (sc-6260; Santa Cruz), anti-rabbit-PKC-θ-T538p (ab63365; Abcam), anti-rabbit-LSD1-s111p (ABE1462; Merck Millipore), anti-rabbit-ALDH1A1 (ab52492; Abcam), anti-rabbit-EGFR (ab2430; Abcam), anti-mouse-CSV (H00007431-M08; Abnova), anti-goat-ABCB5 (ab77549; Abcam), anti-rabbit-FAP-α (ab28244; Abcam), anti-goat CCL2 (sc-1304; Santa Cruz), anti-goat-F4/80 (sc-26642; Santa Cruz), anti-goat-CCR7 (NB100–712; Novus Biologicals), anti-mouse-CD38 (102761; Biolegend), anti-mouse-CD206 (ab8918; Abcam), and anti-goat-EGR2 (sc-204050; Santa Cruz). Secondary antibodies used: anti-rabbit-Alexa Fluor 488 (A21206; Life Technologies) or anti-rabbit-Alexa Fluor 568 (A10042; Life Technologies), anti-mouse-Alexa Fluor 568 (A10042; Life Technologies), or anti-goat-Alexa Fluor 633 (A21082; Life Technologies).
+ Open protocol
+ Expand
4

Immunofluorescence Staining of Cultured Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were grown on round coverslips. Using 4% paraformaldehyde and 1% Triton X-100 cells were fixed and permeabilized. Blocking of cells was done with Dako REAL peroxidase blocking solution (Agilent Technologies, CA) for 15 min and antibodies were diluted in BrightDiluent green (Immunologic, NL). Cells were incubated overnight at 4 °C with the following primary antibodies; mouse anti-vimentin (Santa Cruz, sc-73259, 1:300), rabbit anti-E-cadherin (Abcam, Ab40772, 1:300) and rabbit anti-laminin (Thermo Fisher, PA5-22901, 1:200). Cells were incubated for 1 h at room temperature with the following secondary antibodies; Alexa Fluor 448 anti-rabbit IgG1 (H + L, Invitrogen, A11008, 1:400) and Alexa Fluor 546 anti-mouse IgG (H + L, Invitrogen, A11030, 1:400). Actin staining was performed using ActinRed 555 Readyprobe (Thermo Fisher, R37112) and nuclear staining was with DAPI (Sigma Aldrich, D9541-5MG, 1:5000). Images were obtained on a SP8-X-DLS Confocal microscope (Leica).
+ Open protocol
+ Expand
5

Western Blot Analysis of Epithelial-Mesenchymal Transition Markers

Check if the same lab product or an alternative is used in the 5 most similar protocols
Triton X‐100 lysis buffer [20 mm Tris (pH 7.4), 2 mm EDTA, 150 mm sodium chloride, 1 mm sodium deoxycholate, 1% Triton X‐100, 10% glycerol, 2 pills protease inhibitor cocktail (Roche)] was used to collect protein from cells. Protein samples were heat‐denatured and equally loaded, separated on 8–12% SDS/PAGE gel, transferred onto a polyvinylidene difluoride membrane (GE Healthcare, Buckinghamshire, UK), and blocked with 5% nonfat dry milk. Primary antibodies for western blot analyses included mouse anti‐α‐tubulin (1 :  20 000 dilution; Sigma), rabbit anti‐Snail (1 : 1000 dilution; Cell Signaling, Danvers, MA, USA), rabbit anti‐Slug (1 : 1000 dilution; Cell Signaling), rabbit anti‐CHIP (1 : 1000 dilution; Abgent, San Diego, CA, USA), mouse anti‐Flag (1 : 3000 dilution; Abcam), mouse anti‐GFP (1 : 1000 dilution; Santa Cruz), mouse anti‐HA (1 : 1000 dilution; Abcam, Cambridge, MA, USA), mouse anti‐Vimentin (1 : 1000 dilution; Santa Cruz, Santa Cruz, CA, USA), mouse anti‐E‐cadherin (1 : 5000 dilution; BD Biosciences, San Jose, CA, USA), and mouse anti‐Ub (1 : 5000 dilution; Santa Cruz). Membranes were incubated with horseradish peroxidase‐conjugated anti‐mouse or anti‐rabbit secondary antibody (1 : 5000 dilution; Cell Signaling) for 1 h, and chemiluminescence signals were detected by ECL substrate (GE Healthcare, Chicago, IL, USA).
+ Open protocol
+ Expand
6

Immunohistochemical Characterization of Placental Tissue

Check if the same lab product or an alternative is used in the 5 most similar protocols
Placental explants were fixed in formalin during 24 h at room temperature and embedded in paraffin. Tissue sections (5 μm) were de-waxed using xylene and alcohol and epitope retrieval was carried out using citrate buffer (pH 6) at 95°C during 20 min. Sections were re-hydrated using TBS 0.01% Tween 20 for 5 min and blocked with 2.5% horse serum for 20 min. Immunostainings were performed with the following antibodies: rabbit anti-Cytokeratin-7 (Genetex; 2 μg/mL), mouse anti-Vimentin (Santa-Cruz; 2 μg/mL) and mouse anti-placental alkaline phosphatase (Biolegend; 1 μg/mL). Immunostaining for hCMV was performed as previously described (Benard et al., 2014 (link)), using a mouse monoclonal antibody directed against the hCMV IE antigen (clone CH160, Abcam). Secondary antibody-coupled to biotin was then used prior to Vectastain RTU elite ABC Reagent (Vector laboratories) and staining by diaminobenzidine (DAB). Sections were finally counter-stained with hematoxylin. Image acquisition was performed on a Leica DM4000B microscope or on a Panoramic 250 scanner (3DHISTECH).
+ Open protocol
+ Expand
7

Western Blot Analysis of EMT Markers

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells from untreated group, TGF-β1-treated and SB431542-treated cells were washed 3 times with ice-cold PBS. Lysis buffer was then added, and the cells were lysed on ice for 30 min, followed by centrifugation at 12,000 rpm for 10 min at 4°C to remove cell debris. Protein samples were mixed with loading buffer and heated at 100°C for 10 min, after which the samples were separated by 10% SDS-PAGE gels (Bio-Rad, California, USA). Proteins were then transferred to polyvinyl difluoride membranes (Solarbio Systems, Beijing, China). Membranes were blocked in 5% nonfat milk in TBST buffer for 1–2 h at room temperature. The blots were incubated with primary antibodies overnight at 4°C with rabbit anti-p-Smad2 (1∶1000, Cell Signaling Technology, Massachusetts, USA), anti-Smad7 (1∶200, Santa Cruz Biotechnology, California, USA), anti-E-cadherin (1∶500, Abcam, Cambridge, United Kingdom), mouse anti-vimentin (1∶100, Santa Cruz Biotechnology, California USA), or anti-N-cadherin antibodies (1∶1000, Abcam, Cambridge, United Kingdom)This procedure was followed by incubation with sheep anti-mouse (1∶20000) or anti-rabbit (1∶20000) HRP-labeled secondary antibodies for 2 h at room temperature. The bands were detected with an ECL reagent kit (Thermo Systems, Massachusetts, USA). β-Actin immunoblots served as a loading control. All experiments were repeated three times.
+ Open protocol
+ Expand
8

Immunostaining Protocol for Vimentin

Check if the same lab product or an alternative is used in the 5 most similar protocols
Samples were fixed with 4% PFA for 15 min at room temperature, blocked with 1% (w/v) bovine serum albumin (BSA) in PBS, and permeabilized with 0.1% (v/v) Triton X-100 in PBS for 1 h at room temperature. Samples were incubated with primary antibody (diluted in 1% (w/v) BSA in PBS), mouse anti-vimentin (1:200; Santa Cruz Biotechnology, Dallas, TX, USA), overnight at 4 °C. Samples were then washed three times with PBS and incubated with the following secondary antibodies: antirabbit Alexa 555 (1:200; diluted in 1% BSA in PBS), anti-mouse Alexa 555 (1:200; Thermo Fisher Scientific, Waltham, MA, USA), or Alexa Fluor 488 phalloidin (1:200; Thermo Fisher Scientific) for 2 h at room temperature. Nuclei were stained with Hoechst 33342 (2 mg/mL; Thermo Fisher Scientific) for 10 min at room temperature. Fluorescence images were acquired using a confocal microscope (LSM 710; Carl Zeiss, Oberkochen, Germany) at the Soonchunhyang Biomedical Research Core Facility of KBSI.
+ Open protocol
+ Expand
9

Vimentin Expression Analysis in CRC Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Immunoblotting was performed to detect the expression of vimentin in CRC cell lines. Transfected cells were lysed in RIPA lysis buffer (ProMab Biotechnology). Protein was loaded onto a SDS-PAGE minigel and transferred onto PVDF membrane. After probed with 1:500 diluted mouse anti-vimentin (Santa Cruz Biotechnology, Santa Cruz, CA, USA) at 4°C overnight, the blots were subsequently incubated with HRP-conjugated secondary antibody (1:5000). Signals were visualized using ECL Substrates (Millipore, MA, USA). GAPDH was used as an endogenous protein for normalization.
+ Open protocol
+ Expand
10

Immunofluorescence Staining of Pancreatic Cancer Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
After the specific time of incubation, MIA PaCa-2, PANC-1, BxPC-3 and CAPAN-2 cells were fixed in p-formaldehyde (4% v/v in PBS) for 5 minutes. The cells were permeabilized in Triton X-100 (0.5% v/v in PBS) for 5 minutes, and then incubated in goat serum (20% v/v PBS) for 30 minutes, and with rabbit anti-ANXA1 antibody (1:100; Invitrogen), mouse anti-FAK (1:100; BD Transduction Laboratories), mouse anti-E-cadherin (1:250; Santa Cruz Biotechnology) and/or mouse anti-vimentin (1:500; Santa Cruz Biotechnology) overnight at 4°C. After two washing steps with PBS, cells were incubated with anti-rabbit and/or anti-mouse AlexaFluor (488 and/or 555; 1:1000; Molecular Probes) for 2 hours at RT and then with FITC-conjugated anti-F-actin (5 μg/ml; Phalloidin-FITC, Sigma) for 30 minutes at RT in the dark. The coverslips were mounted in glycerol (40% v/v PBS). A Zeiss LSM 710 Laser Scanning Microscope (Carl Zeiss MicroImaging GmbH) was used for data acquisition. To detect nucleus, samples were excited with a 458 nm Ar laser. A 555 nm He-Ne laser was used to detect emission signals from ANXA1 stain. Samples were vertically scanned from the bottom of the coverslip with a total depth of 5 mm and a 63× (1.40 NA) Plan-Apochromat oil-immersion objective. Images were generated with Zeiss ZEN Confocal Software (Carl Zeiss MicroImaging GmbH).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!