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3 protocols using anti vimentin

1

Immunohistochemical Profiling of Tissue Samples

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Fresh tissues were immobilized with 4% formalin for 48 h at 37°C and subsequently washed with cool phosphate-buffered saline (PBS) three times for 5 min each time. Tissue samples were dehydrated using ethanol, embedded in paraffin, and then cut them into 4-μm-thick sections of 2 mm diameter to produce TMAs. The paraffin sections were dewaxed in an incubator at 65°C overnight, before being deparaffinized in xylene and rehydrated using a decreasing ethanol gradient. Sections were placed in ethylene diamine tetraacetic acid (cat.no. 0085; Beyotime) and heated in a microwave for 10 min for antigen repair. A 3% hydrogen peroxide was used to eliminate endogenous peroxidase at 37°C for 30 min. Sections were incubated with anti-HNRNPC (dilution 1:50, cat. no. ET1611-2; HUABIO), anti-ki67 (dilution 1:10000, cat. no. 27309; Proteintech), anti-CD34 (dilution 1:50, cat. no. ET1606-11; HUABIO), anti-Vimentin (dilution 1:100, cat. no. ET1610-39; HUABIO), and anti-E-Cadherin (dilution 1:50, cat. no. ET1607-75; HUABIO) antibodies at room temperature overnight, and then with secondary antibody (dilution: 1:1, cat.no. K5007; Dako) for 1 h at room temperature. Finally, sections were stained with an IHC kit (cat. no. K5007; Dako) according to the manufacturer’s protocol.
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2

Protein Expression Analysis in Cancer Cells

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AGS and HGC27 cells were lysed in RIPA lysis buffer (Beyotime, Shanghai, China). The membranes were blocked with 5% skimmed milk and incubated overnight at 4 ℃ with the following primary antibodies. The primary antibodies were as follows: anti-HMGB1 (1:1,000; Bioss, Beijing, China), anti-β-catenin (1:1,000; Bioss), anti-Wnt3a (1:1,000; Bioss), anti-c-Myc (1:1,000; Bioss), anti-E-cadherin (1:1,000; Servicebio), anti-N-cadherin (1:1,000; Servicebio), anti-Vimentin (1:1,000; Huabio, Hangzhou, China), anti-Snail (1:1,000; Huabio) and anti-GAPDH (1:4,000; GB11002, Servicebio) at 4 ℃ overnight. Then, the prepared membranes were incubated with secondary antibody (1:10,000, Bioss) for 2 h. Finally, the blots were visualized with an enhanced chemiluminescent reagent (Biosharp, Beijing, China).
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3

Western Blot Analysis of Stemness Markers

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Extract total proteins from cell lines as previously described [30] (link). A standard BCA assay kit was used to determine the protein concentration (Beyotime, China). Equal amounts of total protein were separated using standard SDS-polyacrylamide gel electrophoresis (PAGE). The membranes were then incubated 4°C overnight with anti-CD44, anti-CD133, anti-EPCAM, anti-E-cadherin, anti-β-actin (ProteinTech, USA), anti-CD166 (R&D system, AF1172), and anti-Vimentin (HuaBio, EM0401) antibodies diluted in 5% bovine serum albumin (BSA). The bands were detected using horseradish peroxidase (HRP)-conjugated secondary antibodies and the enhanced chemiluminescence (ECL) reagent according to the manufacturer's protocols (Millipore, USA).
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