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LAMP2 is a laboratory equipment product designed for use in genetic analysis. It is a key component in the Lysosome-Associated Membrane Protein 2 (LAMP2) detection and analysis process. The core function of LAMP2 is to facilitate the identification and quantification of the LAMP2 protein in biological samples.

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12 protocols using lamp2

1

Immunoblot and Immunofluorescence Analysis of Autophagy Markers

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All chemicals were purchased from Sigma‐Aldrich (St. Louis, MO, USA) unless stated otherwise. The primary antibodies used for immunoblot were: Beclin‐1 (1:1000), p62 (1:1000), LC3 (1:1000), mammalian target of rapamycin (mTOR, 1:1000), p‐mTOR (Ser2448; 1:1000), AKT (1:1000), p‐AKT (Ser473; 1:1000), AMP‐activated protein kinase (AMPK, 1:1000), p‐AMPK (Thr172; 1:1000), p70 S6 kinase (P70S6K, 1:1000), p‐P70S6K (Thr389; 1:1000), UNC‐51‐like kinase 1 (ULK1, 1:1000), p‐ULK1 (Ser757; 1:1000) and high mobility group protein B 1 (HMGB1, 1:1000) purchased from Cell Signaling Technology (Danvers, MA, USA), and lysosome‐associated membrane protein‐2 (LAMP‐2, 1:500) purchased from Thermo Fisher Scientific (Rockford, IL, USA). The primary antibodies used for immunohistochemistry (IHC) and immunofluorescence (IF) were LC3 (1:200 for IHC and 1:25 for IF) purchased from Sigma‐Aldrich and LAMP‐2 (1:200 for IHC and 1:50 for IF) purchased from Thermo Fisher Scientific.
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2

Western Blot Analysis of Exosomes

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Exosome and cell lysates were separated by SDS-PAGE using precast, 4–15% gradient gels and transferred to PVDF membranes. Membranes were blocked for 2 h using 5% nonfat dry milk in Tris-buffered saline (TBS) with Tween-20 (TBST; 138 mM NaCl, 2.7 mM KCl, 50 mM Tris, pH 8.0, 0.05% Tween-20). Membranes were then incubated overnight in blocking solution containing antibodies obtained from commercial sources (CD9 [clone HI9a, BioLegend]; CD63 [clone MX-49.129.5, Santa Cruz Biotechnology], CD81 [555675, BD Pharmingen], E-cadherin [20874-1-AP, Thermo Fisher]; N-cadherin [MA1-2002, Thermo Fisher]; GRP78/BiP [PA1-014A, Thermo Fisher]; calreticulin [MA5-32131, Thermo Fisher]; ERGIC-3 [clone B5, sc-398778, Santa Cruz Biotechnology]; GM130 [PA1-077, Thermo Fisher]; HSP60 [ab190828, Abcam]; HSP90 [sc-13119; Santa Cruz Biotechnology]; Lamp2 [MA1-205, Thermo Fisher]). The next day, the membranes were washed, exposed to HRP-conjugates of goat secondary antibodies (Jackson Immunoresearch), washed again, incubated with an HRP-activated chemiluminescence detection solution (Amersham), and imaged using a GE Amersham Imager 600. Images were exported as JPEG files and assembled into figures using Adobe Illustrator and Adobe Photoshop.
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3

Proteomic Analysis of EV Secretome

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EVs secreted by SD-MSCs from two different human donors (days 36-40) were lysed in RIPA buffer (Santa Cruz, Dallas, TX) and protein contents estimated using microBCA assay (Pierce, Rockford, IL) and western blot assays were performed us 10 μg of proteins. Antibodies: PDGFR-β (Santa Cruz, cat# sc-432, 1:200), LAMP2 (Thermo Scientific, cat# MA1-20798, 1:200), TIMP-1 (Chemicon, cat#AB800, 1:1000), CD90 (BD Pharmingen, cat#555596, 1:200), TIMP-2 (Chemicon, cat#AB801, 1:1000), CD9 (AbCam cat#ab2215) and CD81 (AbCam cat#ab79559).
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4

Lysosomal Membrane Protein LAMP2 Detection

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Rabbit polyclonal antibody against the major lysosomal membrane protein LAMP2 (#PA1-655) was from ThermoFisher (São Paulo, Brazil). Mouse monoclonal antibodies against alpha-tubulin (clone DM1a) and rabbit polyclonal antibodies against beta-catenin (#C2206) were from Sigma-Aldrich (São Paulo, Brazil). Mouse monoclonal anti-Lamin A/C (#4777) was from Cell Signaling Technology (Danvers, MA, USA). NucSpot live cell nuclear stain was from Biotium Inc. (Fremont, CA, USA). DNA-binding probe 4,6-Diamino-2-phenylindole dihydrochloride (DAPI), Hoechst nuclear stain (#33342), Alexa Fluor 488-goat anti-rabbit IgG antibodies, and Alexa Fluor 546-goat anti-mouse IgG antibodies were from Molecular Probes (Eugene, OR, USA).
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5

Visualizing gp120-mediated CXCR4 trafficking

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The following antibodies were used: DM1A (Sigma), CXCR4 (Abcam #ab2074), EEA1 (Cell Signaling #3288), and LAMP-2 (Thermo Scientific #PA1-655). Recombinant gp120 IIIB and fluorescein-conjugated recombinant gp120 IIIB were purchased from Immunodiagnostics (#1001 and #1001-F, respectively). Gp120 BaL and AMD3100 (AMD) were obtained from the National Institutes of Health AIDS Research and Reference Reagent Program. Rhodamine-dextran (10,000 MW), Alexa Fluor 594-cholera toxin B, and Alexa Fluor-transferrin were purchased from Invitrogen. The HRP-conjugated secondary goat anti-rabbit antibody was purchased from Jackson. Methyl-β-cyclodextrin (CD) was purchased from Sigma.
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6

Vastus Lateralis Protein Analysis

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Vastus lateralis biopsies obtained baseline and 6 months were used for the immunoblotting. Samples were homogenized in 1 ml of cold MSD-Tris lysis buffer (Mesoscale Discovery, R60TX-3) supplemented with phosphatase inhibitor and protease inhibitor cocktail tablets, using a FastPrep 24 instrument (MP Biomedicals). Protein concentration was determined by BCA assay kit (Thermo Scientific). 20 micrograms of purified proteins were separated by SDS-polyacrylamide gel electrophoresis (SDS-PAGE) on either a 4–20% or a 4–15% gradient gel (BioRad) and transferred onto PVDF membranes (Thermo Fisher Scientific). Membranes were incubated overnight at 4 °C with the following primary antibodies: MEF2A (Thermo Fisher Scientific, PA5–27380), and LAMP2 (Thermo Fisher Scientific #PA1–655). Anti-rabbit horseradish peroxidase-conjugated antibodies (Santa Cruz) were used as secondary antibodies. Densitometric analyses of western blot images were performed by using Image Studio Lite v5.2 (LiCOR) and normalized to Revert Total Protein Stain (LiCOR; #926–11011). Because muscle samples were used up for the MPS and gene expression analyses, only 4–7 subjects per group had remaining samples available for immunoblotting.
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7

Autophagy Regulation in Inflammation

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Sodium taurocholate (Na-TC) and sodium pentobarbital were purchased from Sigma-Aldrich (St. Louis, MO, USA). Lentiviral vectors encoding ATG7 (Lv-ATG7) or CAMKII (Lv-CAMKII) and lentivirus with scrambled sh-ATG7 (Lv-sh-ATG7) or sh-CAMKII (Lv-sh-CAMKII) were purchased from GeneChem (Shanghai, China). MiR-30b-5p mimic and mimic negative control were purchased from RiboBio (Guangzhou, China). The primary antibodies used for Western blot were microtubule-associated protein 1 light chain 3 (LC3), p62, ATG7 and high mobility group protein B1 (HMGB1) purchased from Cell Signaling Technology (Danvers, MA, USA), tumor necrosis factor α (TNF-α), β-actin and interleukin-1β (IL-1β) purchased from Santa Cruz Biotechnology (Dallas, Texas, USA), CAMKII purchased from Abcam (Shanghai, China), and lysosome-associated membrane protein-2 (LAMP-2) purchased from Thermo Fisher Scientific (Rockford, IL, USA).
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8

Autophagy Protein Expression Analysis

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The Antibodies used in this study were ATG3, ATG4B, ATG7, BECN1, BNIP3, Cathepsin D, LC3-I/II, mTOR, phospho-mTOR (Ser2448), AMPK, phospho-AMPK, phospho-ULK1 (Ser317), Rubicon, phospho-ULK1 (Ser757) (Cell Signaling Technology, Beverly, MA), LAMP-2 (Invitrogen, Carlsbad, CA), TFEB (Novus Biologicals, Littleton, CO), FIP200 (MilliporeSigma, St. Louis, MO), p62 (BD Biosciences, Franklin Lakes, NJ) and β-actin (Santa Cruz Biotechnology, Santa Cruz, CA). All other reagents used were of analytical grade and purchased from MilliporeSigma (St. Louis, MO).
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9

Protein Expression Analysis in Neurodegeneration

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The following antibodies were used for Western blot: Progranulin (R&D Systems #AF2420, 1:500 and MilliporeSigma #HPA008763, 1:500), NeuN (MilliporeSigma #MAB377, 1:500), GFAP (Agilent #Z033429, 1:500), LC3B (MilliporeSigma #L7543, 1:500), p62 (Proteintech #18420-1-AP, 1:1000), LAMP-1 (Santa Cruz Biotechnology #sc-20011, 1:1000), GM130 (Cell Signaling Technologies #12480, 1:1000), Grp94 (Santa Cruz Biotechnology #sc-32249, 1:500), Cytochrome C (Santa Cruz Biotechnology #sc-13156, 1:500), and Gapdh (MilliporeSigma #MAB374, 1:5000). Antibodies used for immunostaining included: Progranulin (R&D Systems #AF2420, 1:500), LAMP-2 (Invitrogen # PA1655, 1:500), GFP (Cell Signaling Technologies #2956, 1:500), Cathepsin D (R&D Systems #AF1029, 1:500), NeuN (MilliporeSigma #MAB377, 1:500), GFAP (Agilent #Z033429, 1:1000), and MAP2 (Invitrogen # PA110005).
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10

Autophagy and Apoptosis Protein Analysis

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Right hemispheres were used for Western blotting. The primary antibodies, including Beclin‐1 (#3738, Cell Signaling Technology, Danvers, MA), LC3B (#83506, Cell Signaling Technology), p62 (#39749, Cell Signaling Technology), LAMP2 (lysosome‐associated membrane protein 2; #PA1‐655, Invitrogen, Waltham, MA), caspase‐3 (#14220, Cell Signaling Technology), PARP (#9542, Cell Signaling Technology), Bcl‐2 (#GTX100064, GeneTex, Irvine, CA), Bax (#GTX109683, GeneTex), and cytochrome c (#GTX108585, GeneTex) were used. Beta‐actin (HRP‐60008, Proteintech Group, Rosemont, IL) was used as a loading control.
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