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4 protocols using il 2 mq1 17h12

1

Multi-Marker Immune Profiling Protocol

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Antibodies used in this study are as follows: CD3 (clone SP-34–2; BD Biosciences), CXCR5 (MU5UBEE; eBioscience), GagCM9 tetramer (NIH tetramer core), CD28 (CD28.2; eBioscience), CD95 (DX2; BD Biosciences), CD279 (PD-1; clone EH12.2H7; BioLegend), CD8 (SK1; BD Bioscience), Ki67 (B56; BD Biosciences), CD4 (L200; BD Biosciences), GrzB (GB11; BD Biosciences), perforin (Pf-344; Mabtech), FoxP3 (206D; BioLegend), HLA-DR (L243; BioLegend), IFNλ (B27; BD Biosciences), TNFα (MAb11; BD Biosciences), and IL-2 (MQ1- 17H12; BD Biosciences).
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2

Antigen-specific CD8+ T cell Assay

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After 7-days of expansion with VIPR particles, the T cell cultures were stimulated for 6 h with 20 μg/ml peptide antigen (> 95% purity) specific for the VIPR particle expanded CD8+ population (CMV pp65: NLVPMVATV; SARS-CoV-2 S protein 269–277 YLQPRTFLL), all peptides were synthesized and obtained from ProImmune, Ltd. After 1-h of peptide stimulation, GolgiStop solution was added (containing Monensin protein transport inhibitor) to block intracellular protein transport (BD Bioscience). As a positive control for cytokine production, T cells were also stimulated for 6 h with 50 ng/ml PMA and 1 μg/ml Ionomycin (Sigma). T cells were then harvested, and stained for surface markers CD8 (HIT8A, 1:80), CD107a (H4A3 1:50), then fixed and permeabilized using BD Cytofix/Cytoperm Fixation/Permeabilization Solution (ThermoFisher). Cells were then stained for surface markers followed by intracellular cytokines using antibodies specific for IFN-y (4S.B3, 1:40) ), GzmB (QA16A02 1:50), Perforim A (dG9 1:50) (Biolegend) IL-2 (MQ1-17H12, 1:40) (BD Bioscience), or TNF-a (MAb11, 1:40) (ThermoFisher). Flow analysis was carried out on a Fortessa flow cytometer (BD Bioscience) and data analyzed and flow cytometry figures generated using FlowJo 10 software (BD Biosciences).
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3

Cytokine profiling of stimulated PBMCs

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PBMCs were stimulated with 5 ng/ml IL-2 (Cell Signaling), 50 ng/ml PMA (Merck), 1 μg/ml ionomycin (Sigma Aldrich), and GolgiStop (BD Biosciences) was added for the final 5 hours. PBMCs were stained with anti-human TCRγδ and CXCR5. PBMCs were then fixed using a BD Perm/Fix intracellular staining kit. PBMCs were then stained with IL-4 (MP4-25D2), IL-10 (JES3-9D7), IFNγ (4S.B3) (all from Biolegend, San Diego, CA, USA) and IL-2 (MQ1-17H12, BD Biosciences, San Diego, CA, USA) at room temperature for 30 min at dark. Data were collected by flow cytometry on a FACScalibur and were analyzed with FlowJo software (TreeStar).
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4

Comprehensive Immune Cell Profiling

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For cell surface staining, the following fluorochrome-conjugated monoclonal antibodies were used CD3(UCHT1), CD4(13B8.2), CD8(B9.11), CD19(J3-119), CD24(ALB9), CD38(LS198-4-3), CD45(J.33), CD45RO(UCHL1), CD127(R34.34) and IgD(IADB6) (all from Beckman-Coulter, Mijdrecht, The Netherlands), CD25(M-A251), CCR4(1G1), CCR6(11A9) and CXCR3(1C6/CXR3) (BD Biosciences, Erembodegem, Belgium), and BAFF-R(11C1) (BioLegend, Uithoorn, The Netherlands). Intracellular analysis of IL-2(MQ1-17H12) (BD Biosciences), IL-4(8D4–8), IL-17(EBIO64CAP17), IFNγ(4S.B3) (eBioscience, San Diego, CA, USA), and TNFα(Mab11) (Dako, Glostrup, Denmark) was performed after fixation and permeabilization, using Fix and Perm reagent (eBioscience). Before intracellular cytokine measurement, the cells were stimulated for 4 hours with PMA (12.5 ng/ml), ionomycin (500 ng/ml) and Brefeldin A (5 µg/ml; Sigma-Aldrich, Zwijndrecht, The Netherlands).
The cell phenotype was analyzed by five-color (FC500) or ten-color flow cytometry (Navios), and data were analyzed using Kaluza software (all from Beckman-Coulter). Isotype controls or unstained cells were used for gate settings. Cell populations >0.1% of the CD45+ lymphocyte population with a threshold of more than 50 cells were considered reliable.
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