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2 protocols using goat anti rabbit irdye680rd secondary antibodies

1

Protein Isolation and Western Blot Analysis

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Cell lysates were subjected to standard trichloroacetic acid
(TCA)/acetone precipitation. The isolated protein fraction pellet was dried,
reconstituted in 8 M urea, and the total protein concentration was
determined by UV spectrophotometry. For SDS-PAGE, a quantity of 20 μg
protein was loaded per lane of NuPAGE 4–12% Bis-Tris gels
(Invitrogen) and separated at 200 V constant voltage. Gels were briefly
washed in 20 % ethanol and proteins were transferred to PVDF membranes using
the iBlot 2 dry transfer device (Invitrogen) using the following method: 20
V for 1 minute, 23 V for 4 minutes, and 25 V for 3 minutes. Membranes were
blocked in Odyssey Blocking Buffer in PBS (LiCor) and probed with mouse
anti-PDCD4 or PTEN (Santa Cruz Biotechnology) and rabbit anti-GAPDH (Cell
Signaling Technology) primary antibodies. Mulitplex detection was
accomplished using goat anti-mouse IRDye 800CW and goat anti-rabbit IRDye
680RD secondary antibodies (LI-COR Biotechnology).
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2

Protein Expression Analysis in RPE Cells

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RPE cells were cultured for 14 days and lysed by RIPA buffer (Beyotime, Shanghai, China) for 30 min. After centrifugation, total protein concentrations of all samples were quantified using a BCA Protein Quantification Kit (Vazyme) according to the manufacturer’s protocols. Equal amounts (30 μg) of proteins per lane were loaded and separated on sodium dodecyl sulfate (SDS)-polyacrylamide gel, and then transferred to nitrocellulose membranes. After blocking with PBS containing 3% BSA for 1 h at room temperature, the membranes were incubated with primary antibodies, including rabbit anti-PRPF6 (1:1000, Invitrogen), rabbit anti-CRALBP (1:1000, Proteintech), mouse anti-RPE65 (1:1000, Abcam), rabbit anti-tyrosinase (1:1000, Abcam), mouse/rabbit anti-GAPDH (1:2000, Arigo) and mouse anti-β-Actin (1:2000, Cell Signaling Technology, Danvers, MA, USA) overnight at 4 °C. Then, membranes were incubated with goat anti-rabbit IRDye 680RD secondary antibodies or goat anti-mouse IRDye 800 CW secondary antibodies (1:10,000, LI-COR Bioscience, Lincoln, NE, USA) for 1 h at room temperature. The bands were imaged on the Odyssey Fc Imaging System (LI-COR Bioscience), and the results were analyzed by Fiji/Image J software (National Institutes of Health, Bethesda, MD, USA).
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