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3 protocols using nf κb p105 p50

1

Lymphotoxin Stimulation of Fibroblasts

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Fibroblasts of patient (P2) and healthy donor were stimulated with 100 ng ml−1 of lymphotoxin α1/β2 (R&D Systems, 678-LY-010) for 4 h. After stimulation, cells were fixed with 4% formaldehyde in PBS for 30 min and then blocked and permeabilized with solution containing 10% FCS plus 0.1% Triton X-100. Cells were immunostained with DAPI and rabbit antibodies against NFκB2 (p100/p52) (Cell Signaling, 3017) and NF-κB (p105/p50) (Cell Signaling, 3035) at a dilution of 1:100, respectively, and afterwards with anti-rabbit Alexa Fluor 546-conjugated antibody at a dilution of 1:500 (Life Technologies, A10040). Images were acquired on a Leica AF6000 fluorescent microscope using Leica LASAF software for acquisition. Images were taken at × 64 magnification.
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2

Western Blot Analysis of Protein Expression

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Whole cell lysate (30 μg/lane), nuclear (10 μg/lane), and cytoplasmic (30 μg/lane) fractions were loaded to a SDS-PAGE gel (Invitrogen, Carlsbad, CA, USA) and separated by electrophoresis. After transfer of the separated proteins onto a piece of PVDF membrane (Millipore, Billerica, MA, USA), the membrane was probed by Western blot. Briefly, the membrane was blocked with 5% nonfat milk for 1 h at room temperature, reacted with a primary antibody (1:1000–2000 dilution) overnight at 4 °C, and followed by incubating at room temperature for 1 h with an HRP-conjugated anti-rabbit IgG secondary antibody (Abmart, Berkeley Heights, NJ, USA). The following primary antibodies were used: IRF-1 (B-1), IRF-8 (C-19) (Santa Cruz Biotech, Santa Cruz, CA, USA), NF-κB p105/p50 (#3035), NF-κB p65 (C22B4), I-κBα (#9247), IRF-3 (D83B9), lamin B1 (D4Q4Z) (Cell Signaling, Beverly, MA, USA), IRF-5 (10T1) (Abcam, Cambridge, MA, USA). The membranes were developed using Immobilon™ Western Chemiluminescent HRP Substrate (Millipore) and the images were acquired using The G-Box fluorescence and Chemiluminescence of imaging system (Syngene, England).
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3

Analyzing Protein Expression in Renal Cortex

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The proteins from renal cortical tissues were extracted with RIPA lysis buffer. The samples were subjected to Western blot analysis with primary antibodies against phospho-NF-κB p65, NF-κB p65, IKKβ, NF-κB p105/p50 (Cell Signaling Technology, MA, United States), RXRα (Abcam, MA, United States), PXR, and GAPDH (Santa Cruz Biotechnology, CA, United States) overnight at 4°C and subsequently incubated with the conjugated secondary antibody of horseradish peroxidase-labeled anti-rabbit IgG or anti-mouse IgG (Cell Signaling Technology, MA, United States) at room temperature. Target protein expression was detected by using an Image Lab System (Bio-Rad Laboratories Inc., Hercules, CA, United States) and analyzed with ImageJ software.
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