Anti-gp135 mAb, clone 3F2/DB [70 (link)], kindly provided by Professor W. James Nelson, Stanford University, California, USA, was used as undiluted hybridoma supernatant. Antibodies against Lipid A were purchased from Abcam.
Gfp rab5
GFP-Rab5 is a fluorescently labeled protein that functions as a marker for early endosomes. It is commonly used in cell biology research to visualize the dynamics and localization of early endosomal compartments within cells.
Lab products found in correlation
8 protocols using gfp rab5
EPEC Strain and Recombinant Protein Protocols
Anti-gp135 mAb, clone 3F2/DB [70 (link)], kindly provided by Professor W. James Nelson, Stanford University, California, USA, was used as undiluted hybridoma supernatant. Antibodies against Lipid A were purchased from Abcam.
Generating SPC99 Mutant Constructs
OSBPL2 Cloning and Mutagenesis Protocol
Early Endosome and Lysosome Imaging
Multimodal Subcellular Imaging Techniques
Co-localization was observed using Zeiss LSM 510 Meta system. Quantitative analysis of co-localization was carried out by calculating Pearson’s correlation coefficients using LSM 510 software.
Visualizing Endosome and Lysosome Dynamics
seeded in 35 mm glass-bottom dishes (Fisher Scientific)
for a confluency of approximately 70% at the time of transfection.
For early endosome morphology and population experiments, a transfection
mixture of 1 μg of GFP-Rab5 (Addgene # 61802), 7.5 μL
of Mirus transfection reagent TransIT LT1, and 250 μL of Opti-MEM
was used. For lysosome morphology and population experiments, a transfection
mixture of 750 ng of mCherry-Lysosomes-20 (Addgene plasmid #55073),
7.5 μL of Mirus transfection reagent TransIT LT1, and 100 μL
of Opti-MEM was used. The morning following the transfection, cells
were switched into DMEM+10% FBS and drugged accordingly with a final
DMSO concentration of 0.15%. Drugs were incubated with cells for 3
h at 37 °C, 5% CO2. Hoechst 33342 nuclear stain diluted
in PBS was added to cells for a final concentration of 1:10,000 and
incubated for the final 20 min of drug treatment. After treatment,
cells were fixed in 1 mL 4% PFA for 10 min at room temperature followed
by washing with ice-cold PBS. Fixed samples were stored in PBS at
4 °C until imaging. Three biological replicates were performed
on different days.
Visualizing Phosphoinositide Dynamics
Fluorescent Labeling of Organelles
Co-localization was observed using Zeiss LSM 510 Meta system. Quantitative analysis of co-localization was carried out by calculating Pearson’s correlation coefficients using LSM 510 software.
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