The largest database of trusted experimental protocols

104 protocols using ab13840

1

Immunofluorescence Characterization of ESCs and PGCLCs

Check if the same lab product or an alternative is used in the 5 most similar protocols
The collected ESCs and PGCLCs formed in different induction systems were fixed with 4% paraformaldehyde for 30 min, washed with PBS three times and treated with 1% Triton X-100 for 15 min, followed by the addition of 10% FBS to block the cells for 2 h. Then, the primary antibodies against SSEA-1 (Abcam, Cambridge, MA, USA, ab16285), OCT4 (Abcam, ab19857) and CVH (Abcam, ab13840) were added and incubated at 37 °C for 2 h and then at 4 °C overnight. After washing three times with PBST, the cells were incubated with the corresponding secondary antibodies at 37 °C for 2 h without light, and then washed three times with PBST, followed by incubation with DAPI for 10 min without light, and then washed again. Fluorescence was observed and photographed under the fluorescence microscope.
+ Open protocol
+ Expand
2

Immunofluorescence Analysis of Gpr177 in Testes

Check if the same lab product or an alternative is used in the 5 most similar protocols
The control and Gpr177 cKO male mice were killed via cervical dislocation and the testes were immediately fixed in Bouin's solution for hematoxylin and eosin (H&E) staining or in 4% formaldehyde (PFA) in PBS for immunofluorescence, as previously described.61 , 64 (link) In brief, tissue sections were deparaffinised and rehydrated, followed by antigen retrieval in 10 mM sodium citrate buffer. The sections were blocked using a blocking buffer (donkey serum, 0.3% Triton X-100 in PBS) and incubated with primary antibodies against GPR177 (1:200; Santa Cruz, St. Louis, MO, USA, sc-133635), MVH (1:300; Abcam, Cambridge, UK, ab13840) or AQP3 (1:400; kind gift from Dr. Qi Chen) overnight at 4 °C. Sections were washed and incubated with FITC-conjugated secondary antibodies (1:200; Jackson ImmunoResearch, West Grove, PA, USA) for 1 h and counterstained with DAPI (1:1000; Sigma-Aldrich) to identify the nuclei.
+ Open protocol
+ Expand
3

Immunohistochemical Detection of Germ Cell Markers

Check if the same lab product or an alternative is used in the 5 most similar protocols
Frozen sections (5 µm) were washed three times with PBS every 5 min, permeabilized with PBS containing 0.2% Triton X-100 for 8 min on ice, and washed with PBS containing 0.1% Tween 20 (PBST) for 5 min. Blocking treatment with PBS containing 1% Roche blocking reagent (Roche, Basel, Switzerland) was performed at room temperature for 1 h. The sections were incubated using anti-Oct3/4 (catalogue number 09-0023, 1:100 dilution; Stemgent Inc., Cambridge, MA, USA) or anti-DDX4/MVH (ab13840, 1:500 dilution; Abcam, Cambridge, UK). Fluorescence immunohistochemical detection was performed using a donkey anti-rabbit IgG H&L (Alexa Fluor 647) secondary antibody (ab150075, 1:300 dilution; Abcam) and DAPI (340-07971, 1:1000 dilution; Dojindo, Kumamoto, Japan). After treatment with the primary or secondary antibodies, they were washed three times with PBST for 15 min. The sections were sealed with ProLong Diamond Antifade Mountant (Thermo Fisher Scientific, Inc., Waltham, MA, USA).
+ Open protocol
+ Expand
4

Isolation of ovarian cells using MVH antibody

Check if the same lab product or an alternative is used in the 5 most similar protocols
The pellet of ovarian cells was re-suspended
and incubated with polyclonal rabbit antimouse
MVH (ab13840, Abcam, Cambridge,
UK) and subsequently by goat anti-rabbit IgG
magnetic beads (130-048-602, MiltenyiBiotec
Inc., UK). The mixture of cells and magnetic
beads was placed on the magnetic bead separator,
while separation was performed following
the manufacturerʼs instructions and as described
in experiment 1. Isolated cells were cultured on
mitotically inactivated MEF in 4 -well plates at
37˚C in a 5% CO2 atmosphere.
+ Open protocol
+ Expand
5

Immunohistochemical Analysis of Ovarian VASA

Check if the same lab product or an alternative is used in the 5 most similar protocols
In brief, ovaries were fixed with 4% PFA at 4°C overnight, incubated in 30% sucrose (#S0389, Sigma-Aldrich) at 4°C for three days, frozen, sectioned, incubated with PBS containing 0.25% Triton X-100 for 15 min, and blocked with PBST containing 3% BSA for 30 min. Sections were incubated with a rabbit anti-VASA (DDX4) antibody (1∶200; #ab13840, Abcam, Cambridge, UK) for 1 h at room temperature, rinsed with PBS, and incubated with a goat anti-rabbit IgG secondary antibody labeled with Alex Fluor 594 (1∶300). Nuclei were stained with DAPI for 3 min. All sections were mounted with fluoroshield mounting medium (#ab104135, Abcam) on glass slides and observed using a confocal microscope (Leica TCS SP5, Wetzlar, Germany).
+ Open protocol
+ Expand
6

Immunostaining Protocol for Ovarian Follicle Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
The isolated ovaries were fixed and permeabilized with 4% PFA and then prepared for paraffin section. After dewaxing and rehydration of paraffin sections, membrane permeation was performed after washing. Then the sections were blocked with blocking buffer (5% goat serum, 0.3% Triton™ X-100 in 0.1 M PBS) for 1 h at room temperature, followed by the incubation with primary antibody overnight at 4 °C. After washing with TBST, sections were incubated with the secondary antibody at 37 °C for 1 h. After washing again, DAPI was added to probe the nuclei and mounted with a mounting medium (H-1400, Vector Laboratories, Inc). Axio Scan.Z1 (Zeiss) and Zeiss LSM780 were used for widefield and confocal imaging, respectively. Images were captured and analyzed using software Zeiss Zen (v2.1) and Image J (v1.52i). The primary antibodies used for immunostaining included: anti-DDX4 (1:200, ab13840, Abcam), anti-AMH (1:400, sc-6886, Santa Cruz Biotechnology), anti-cleaved CASP3 (9664, CST), anti-Foxo3 (1:250, Santa Cruz Biotechnology), and anti-BDNF (1:100, Abcam, ab108319). The secondary antibodies included: Alexa Fluor 546 conjugated goat anti-mouse (Thermo Fisher Scientific, A-11030, 2 μg/ml) and Alexa Fluor 488 conjugated goat anti-rabbit (Thermo Fisher Scientific, A-11008, 2 μg/ml).
+ Open protocol
+ Expand
7

Visualization of PLK4 and DDX4 in Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Reagents and the detailed protocol for smFISH and IF were described in Lyubimova et al. (2013) (link). Briefly, cells were fixed with 4% PFA (diluted in 1× PBS), permeabilized with permeabilization buffer (1× PBS, 5 mM MgCl2, 0.5% Triton), and incubated with prehybridization buffer (2× SSC, 15% formamide). Cells were incubated with fluorescently labeled PLK4-Cy3 (80 nM) smFISH probes and rabbit DDX4 (1:250; Abcam ab13840) antibody diluted in hybridization buffer for 3 h at 37°C. Oligonucleotide probe sequences are listed in Supplemental Table S2. Following washes, cells were incubated with Alexa fluor 488 secondary antibody (Life Technologies) diluted in hybridization buffer for 1 h at room temperature. Cells were mounted using ProLong Diamond antifade reagent with DAPI (Life Technologies). For single-molecule mRNA visualization, images were collected using a Leica 63×, 1.40 NA oil with 0.2-μm z-sections.
+ Open protocol
+ Expand
8

Isolation and Culture of Mouse Ovarian Stem Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
For most experiments (except as indicated below), OSCs were isolated from ovaries of young adult mice (2–3 months of age) by FACS using a C-terminal DDX4-specific antibody (ab13840, Abcam). The cells were analyzed immediately or established in culture without somatic feeder cells, as described16 (link), 17 (link), 46 (link), 93 (link). Purified mouse OSCs propagated under these conditions spontaneously differentiate into IVD-oocytes for up to 72 h after passage until confluence is regained, and the number of IVD-oocytes generated by a fixed number of OSCs seeded per well remains relatively constant over successive passages16 (link), 17 (link), 19 (link). Between passages 32–40, OSCs were transfected with the desired plasmids (pStra8-HSVtk or pStra8-Gfp, each containing a neomycin resistance gene) using Lipofectamine 2000 (Invitrogen) and then selected by G418 (Geneticin, Cellgro) over 2 weeks. Cells were then maintained in G418 for all experiments, and the number of IVD-oocytes generated and released into the medium after treatment with vehicle or GCV (2 μM) was then determined by direct visual counts under a microscope16 (link), 17 (link), 19 (link). In other experiments, GFP-positive cells in ovaries of pStra8-Gfp transgenic female mice were quantitated and then isolated by FACS for gene expression profiling.
+ Open protocol
+ Expand
9

Immunohistochemical Analysis of Germ Cell Markers

Check if the same lab product or an alternative is used in the 5 most similar protocols
Freshly collected tissues were fixed in 4% paraformaldehyde, embedded in paraffin, and sectioned for analysis using primary antibodies against Stra8 (rabbit polyclonal, ab49602; Abcam), Ddx4 (rabbit polyclonal ab13840, Abcam; goat polyclonal AF2030, R&D Systems), Sycp3 (rabbit polyclonal NB300-230, Novus Biologicals), Ser139-phospho-H2afx (mouse monoclonal 05–636, Millipore) or GFP (chicken polyclonal ab13970, Abcam; rabbit polyclonal ab290, Abcam). For IF, detection was performed using donkey anti-chicken Alexa Fluor 488 (Jackson Immuno), donkey anti-goat Alexa Fluor 647 or donkey anti-rabbit Alexa Fluor 546 (Molecular Probes) as secondary antibody16 (link). For IHC, detection was performed using biotin-conjugated anti-rabbit IgG (Santa Cruz Biotechnology) as secondary antibody for horseradish peroxidase-based DAB detection (Sigma-Aldrich). Images were captured using a Nikon E800/BioRad Radiance 2000 confocal microscope or a Nikon ECLIPSE TE2000-S microscope.
+ Open protocol
+ Expand
10

Proteomic Analysis of Ovarian Tissues

Check if the same lab product or an alternative is used in the 5 most similar protocols
Ovarian tissues were homogenized in RIPA buffer (Thermo Scientific, Rockford, IL, USA) and centrifuged at 12,000 × g for 20 min. The protein content of samples was determined using a BCA protein assay kit (Bio-Rad Laboratories, Carlsbad, CA). Aliquots of each sample were separated via 12% SDS-PAGE and then transferred onto a nitrocellulose membrane, which was blocked with non-fat milk for 1 h. The membranes were probed overnight at 4°C with antibodies against the following proteins: HO-1 (ab68477; 1:2000; Abcam); NRF2 (ab92946; 1:3000; Abcam), TNF-α (SAB5700627; 1:1000; Sigma), IL-1β (AB1413-I; 1:4000; Sigma), IL-6 (SAB5700632; 1:2000; Sigma); MVH (ab13840; 1:3000; Abcam); OCT4 (ab184665; 1:2000; Abcam); Ki67 (ab16667; 1:4000; Abcam), PCNA (mAb2586; 1:3000; Cell Signaling Technology), ATM (ab199726; 1:2000; Abcam), RAD51 (ab176458; 1:3000; Abcam), and GAPDH (ab181602; 1:3000; Abcam). After washing with PBST buffer solution three times, the membranes were incubated with appropriate horseradish peroxidase-conjugated secondary antibodies (Beyotime Institute of Biotechnology) for 1 h at 25 °C, and the protein bands were visualized using an enhanced chemiluminescence kit (Thermo Fisher Scientific Inc.). The blots were scanned and normalized to GAPDH for quantification.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!