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Alexa fluor 555 or 488 secondary antibody

Manufactured by Thermo Fisher Scientific
Sourced in United States

Alexa Fluor 555 or 488 secondary antibodies are fluorescently labeled antibodies that bind to the Fc region of primary antibodies. These secondary antibodies are designed for use in various immunodetection techniques, such as immunofluorescence, flow cytometry, and western blotting. The Alexa Fluor 555 and 488 dyes provide bright, photostable fluorescent signals that can be detected using appropriate filter sets.

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4 protocols using alexa fluor 555 or 488 secondary antibody

1

Lung Morphology and Tight Junction Protein Analysis

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The mice lungs were harvested and the right lung was placed in 4% formalin overnight, dehydrated with graded alcohol, placed in xylene for 1 h and then embedded in paraffin at 60°C. Sections of the lung tissues (4 µm) were stained with hematoxylin and eosin (H&E; Beyotime Institute of Biotechnology) at room temperature. The lung morphology resulting from the different treatments was scored according to H&E stained slides using a novel acute lung injury scoring system (27 (link)). A total of five random fields were selected and the evaluation was completed by two pathologists blinded to the study design. To localize the expression of tight junction proteins, sections were incubated with the anti-ZO-1 (1:200 dilution) or anti-occludin (1:200 dilution) antibodies, and were subsequently conjugated with Alexa Fluor 555 or 488 secondary antibodies (Invitrogen; Thermo Fisher Scientific, Inc.). Antigens were visualized using a Leica DFC425 fluorescence microscope [Leica Microsystems (Schweiz) AG, Heerbrugg, Switzerland].
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2

Histological Analysis of Lung Fibrosis and Injury

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The lungs were collected and sectioned at the thickness of 4 μm. The slides were stained with H&E (Beyotime Institute of Biotechnology, Haimen, China) at room temperature. Microscopic lung fibrosis scoring was done using the Ashcroft scale33 (link). Microscopic lung injury scoring was done using a novel acute lung injury scoring system34 (link). The mean score of five fields was recorded as the final score of the mouse. Every group included 10 mice, and two pathologists were blind to the study design.
Masson-Trichrome staining was done using a commercial kit (Beyotime Institute of Biotechnology, Haimen, China) according to the instructions. ECM deposition was analysed using Image-Pro Plus 6.0 software (Media Cybernetics, Rockville, MD, USA). Immunofluorescence was used to locate and evaluate renin expression and ECM deposition. The antibodies and their concentrations were as follows: anti-renin (1:100 dilution; Santa Cruz), anti-fibronectin (1:200 dilution; Abcam), anti-collagen I (1:200 dilution; Abcam) and anti-α-SMA (1:200 dilution; EMD Millipore), and these were subsequently conjugated with Alexa Fluor 555 or 488 secondary antibodies (Invitrogen, Thermo Fisher Scientific, Waltham, MA, USA). The antigens were visualized using a Leica DFC425 fluorescence microscope [Leica Microsystems (Schweiz) AG, Heerbrugg, Switzerland].
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3

Immunofluorescent Analysis of Autophagy Markers

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Immunofluorescent staining was performed on paraffin vertical sections using antibodies against ATG7 and LC3II. Briefly, the placental vertical sections were dewaxed in xylene, rehydrated and heated in a microwave with citrate buffer (pH = 6.0) for antigen retrieval before exposure to the primary antibodies. Then, sections were immersed in 3% hydrogen peroxide for 10 minutes to block endogenous peroxidase. Unspecific immunoreactions were blocked using 5% inactivated goat serum in PBS for 30 minutes at room temperature. The sections were incubated with ATG7 (1:500, Sigma, USA) or LC3II (1:200, Cell Signaling Technology, USA) antibodies overnight at 4°C. Sections were washed extensively and incubated with the corresponding Alexa Fluor 555 or 488 secondary antibody (1:1000; Invitrogen, Waltham, MA, USA) and DAPI (5 μg/ml, Invitrogen) at room temperature for 2 hours in a dark box.
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4

Immunofluorescence Analysis of Chicken Embryos

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The chicken embryos were harvested after incubation and fixed in 4% PFA overnight at 4 °C. The embryos were blocked with 10% Normal Goat Serum (SB Cat.
No. 0060-01) and incubated with the following primary antibodies at 4 °C overnight on a shaker: HNK-1 (1:500, Sigma, USA), PAX7 (1:100, DSHB, USA), AP2α (1:100, Cell Signaling Technology, USA), Phospho-Histone H3 (pHH3, 1:200, Cell Signaling Technology, USA), neurofilament (NF, 1:200, Invitrogen Antibodies, USA) and cleaved-Caspase3 (c-Caspase3, 1:200, Cell Signaling Technology, USA). After extensive rinsing in PBST (0.1% Tween-20), the embryos were incubated with the corresponding Alexa Fluor 555 or 488 secondary antibody (1:1000, Invitrogen, USA) at 4 °C overnight on a shaker. The embryos were later counterstained with DAPI (1:1000, Invitrogen, USA) at room temperature for 2 hours.
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