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Axioscope compound microscope

Manufactured by Zeiss
Sourced in United States

The Axioscope is a compound microscope designed for high-performance imaging and analysis in laboratory settings. It features a sturdy, ergonomic design and delivers exceptional optical performance for a wide range of applications.

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9 protocols using axioscope compound microscope

1

Quantifying Nerve Ring Axon Defects in Mutant Animals

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For population measurements of nerve ring axon defects, animals were mounted on slides and visualized in an Axioscope compound microscope (Zeiss). Mutant phenotypes were quantified using axon markers to define nerve ring entry and growth based on the meeting point of the dorsal axon part of bilaterally symmetrical neurons. When scoring axons of ASE or AIY neurons, wild type animals show a full axonal ring with a dorsal meeting point of bilaterally symmetrical axons, while mutant animals present an axonal ring with a gap and no dorsal meeting point. Images presented in Fig. 3a–h are of L3–L4 animals for better visualization of the defect. Scoring of mutant phenotypes was performed in L in animals of early larval stages L1–L3; no significant difference of defects was observed in between those early larval stages.
For embryonic axon length measurements, images were acquired on a Deltavision microscope, as described below. Axons were traced and axon length was measured manually using image stacks in ImageJ/Fiji. Axon length was measured from the anterior limit of cell body fluorescence to the anterior limit of axon fluorescent tip.
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2

Microscopic Analysis of Fungal Morphology

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Samples were studied with a Zeiss Axioscope compound microscope operating with differential interference contrast (DIC). Images were obtained with a FLIR camera using open-source software Microscopia Oberta (A. Coloma). Measurements were taken with FIJI win64 ImajeJ software, and reported as follows: maximum value in parentheses, range between the mean plus and minus the standard deviation, minimum value in parentheses, and the number of elements measured in parentheses. For some images of conidiophores, the image stacking software Zerene Stacker v. 1.04 (Zerene Systems LLC, Richland, WA, USA) was employed. Morphological descriptions were based on fertile cultures growing on 2 % MEA at room temperature. Scanning electron microscopy (SEM) images were taken with a Hitachi SU 5000 device with controlled pressure (Hitachi High-Technologies Europe, Germany) at the Centre de Microscopie INRAE/ Université de Bourgogne.
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3

Microscopic analysis of fungal cultures

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Samples were studied with a Zeiss Axioscope compound microscope operating with differential interference contrast (DIC). Images were obtained with a FLIR camera using open source software Microscopia Oberta (A. Coloma). Measurements were taken with FIJI win64 ImajeJ software, and reported as follows: maximum value in parentheses, range between the mean plus and minus the standard deviation, minimum value in parentheses, and the number of elements measured in parentheses. For some images of conidiophores, the image stacking software Zerene Stacker v. 1.04 (Zerene Systems LLC, Richland, WA, USA) was employed. Morphological descriptions were based on fertile cultures growing on 2% MEA (20 g/L malt extract, 20 g/L soy peptone, 15 g/L agar, pH 7) at room temperature.
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4

Live Imaging of AIY Axon Defects

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Post-developmental live imaging and scoring of the AIY axon defects (by mgIs18 or otIs133) was performed in L3-L4 animals (or L2 larvae when indicated). For scoring of the nerve ring axon defects of neurons SIA, SIB, ASE, AFD, PVQ, or CEPsh glia membrane morphology, animals were anesthetized (20 mM sodium azide in M9 buffer), mounted on pads (2% agarose in H2O) and examined on an Axioscope compound microscope (Zeiss). 20 animals of L3-L4 larval stage (or L2 larvae when indicated) were mounted per slide and examined immediately after anesthetizing.
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5

Amphid Commissure Axon Defects Assay

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Animals were washed off NGM plates with M9 medium and spun down briefly in a micro-centrifuge. The supernatant was removed, and the lipophilic dye 1,1′-dioctadecyl-3,3,3′,3′-tetramethylindocarbocyanine perchlorate (DiI, prepared in N,N-dimethylformamide) was added at 10 ug/ml in M9. Animals were then soaked in dye for 60 minutes in the dark, washed twice with M9 and mounted on slides to be scored for amphid commissure axon defects in Axioscope compound microscope (Zeiss). Amphid commissure presented variable defects: thinner bundle, indicating at least some amphid axons prematurely stop; or aberrant processes, primarily guided to the anterior of the nerve ring bundle, likely following aberrant sublateral neurons.
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6

Microscopic Observation of Locomoting Amoebae

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Living cells of ATCC® 50979™ were observed on glass slides with cover slips using an AxioScope compound microscope (Carl Zeiss, Thornwood, New York, U.S.A.) with phase contrast at 1000x magnification under a 100x objective (oil immersion). Digital photomicrographs were obtained with an AxioCam digital camera and Axiovision 4.6 software (Zeiss). The images of locomoting amoebae were captured from individual frames of video recorded behavior of living amoebae that had settled on the slide.
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7

Amphid Commissure Axon Defects Assay

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Animals were washed off NGM plates with M9 medium and spun down briefly in a micro-centrifuge. The supernatant was removed, and the lipophilic dye 1,1′-dioctadecyl-3,3,3′,3′-tetramethylindocarbocyanine perchlorate (DiI, prepared in N,N-dimethylformamide) was added at 10 ug/ml in M9. Animals were then soaked in dye for 60 minutes in the dark, washed twice with M9 and mounted on slides to be scored for amphid commissure axon defects in Axioscope compound microscope (Zeiss). Amphid commissure presented variable defects: thinner bundle, indicating at least some amphid axons prematurely stop; or aberrant processes, primarily guided to the anterior of the nerve ring bundle, likely following aberrant sublateral neurons.
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8

Quantifying Nerve Ring Axon Defects in Mutant Animals

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For population measurements of nerve ring axon defects, animals were mounted on slides and visualized in an Axioscope compound microscope (Zeiss). Mutant phenotypes were quantified using axon markers to define nerve ring entry and growth based on the meeting point of the dorsal axon part of bilaterally symmetrical neurons. When scoring axons of ASE or AIY neurons, wild type animals show a full axonal ring with a dorsal meeting point of bilaterally symmetrical axons, while mutant animals present an axonal ring with a gap and no dorsal meeting point. Images presented in Fig. 3a–h are of L3–L4 animals for better visualization of the defect. Scoring of mutant phenotypes was performed in L in animals of early larval stages L1–L3; no significant difference of defects was observed in between those early larval stages.
For embryonic axon length measurements, images were acquired on a Deltavision microscope, as described below. Axons were traced and axon length was measured manually using image stacks in ImageJ/Fiji. Axon length was measured from the anterior limit of cell body fluorescence to the anterior limit of axon fluorescent tip.
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9

Live Imaging of AIY Axon Defects

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Post-developmental live imaging and scoring of the AIY axon defects (by mgIs18 or otIs133) was performed in L3-L4 animals (or L2 larvae when indicated). For scoring of the nerve ring axon defects of neurons SIA, SIB, ASE, AFD, PVQ, or CEPsh glia membrane morphology, animals were anesthetized (20 mM sodium azide in M9 buffer), mounted on pads (2% agarose in H2O) and examined on an Axioscope compound microscope (Zeiss). 20 animals of L3-L4 larval stage (or L2 larvae when indicated) were mounted per slide and examined immediately after anesthetizing.
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