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11 protocols using ota standard

1

Characterization of Stenotrophomonas sp. CW117

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Stenotrophomonas sp. CW117 was isolated and preserved in our laboratory (26 (link)), Δna and Δna-adh3 mutants and (Δna-adh3)/na and (Δna-adh3)/adh3 complementary strains were constructed in this study. Escherichia coli Trans1-T1 and Escherichia coli BL21 were purchased from TransGen Biotech (Beijing, China). Strain CW117, gene mutants, and complementary strains were cultured in nutrient agar (or nutrient broth), and the E. coli strains were cultured in Luria-Bertani (LB) (Difco, KS, USA) as described previously (9 (link)). OTA standard (98.0% purity) was obtained from Sigma-Aldrich (St. Louis, MO, USA), and OTα standard (99.0% purity) was obtained from Romer Labs (Washington, MO, USA). Other strains, plasmids, and the PCR primers used in this study are shown in Table 1.
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2

Donkey Cecum Isolate OTA Assay

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OTA standard and OTα standard were purchased from Sigma (St. Louis, MO, USA) and were prepared in HPLC grade methanol. The strain ANSB168 was initially isolated from donkey cecum and maintained with 20% glycerin at −20 °C in our lab. E. coli DH5α and E. coli Rosetta (DE3) were purchased from Sangon Biotech (Shanghai, China). The pET-31b vector was obtained from Novagen (Madison, WI, USA). The strain Aspergillus ochraceus 3.4412 was purchased from CGMCC (Beijing, China).
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3

Aflatoxin and Ochratoxin Detection Protocol

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The aflatoxin
standard solution was supplied from Supelco (Bellefonte, PA; Aflatoxin
B and G mix, Cat. No. 46304-U). In 1 mL of methanol, each standard
mix contains 0.3 μg of AFG2, AFB2, and
1 μg of AFG1, AFB1. Aflatoxin standards
(0.2–10.8 ng mL–1 for AFB1 and
AFG1, and 0.06–3.24 ng mL–1 for
AFB2 and AFG2) were dissolved in methanol:water
(20:30, v/v). The OTA standard was purchased from Sigma-Aldrich (Steinheim,
Germany), and working standard sets (0.1–5 ng OTA mL–1) were prepared in acetonitrile/water/acetic acid (99:99:2, v/v/v).
The AflaOchraTest immunoaffinity column (Vicam, Watertown, MA) was
employed in clean-up and preconcentration steps. All analytical and
high-performance liquid chromatography (HPLC)-grade chemicals and
reagents were supplied from Merck (Darmstadt, Germany). Phosphate-buffered
saline (PBS) and phosphate buffer (PB) were prepared according to
Trucksess et al.67 (link)
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4

Ochratoxin A Quantification in Rice

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The rice sample (Sadri Hashemi variety) was purchased from retail markets in Mazandaran. OTA standard was obtained from Sigma (St. Louis, MO). Acetonitrile and HPLC‐grade methanol were purchased from Merck (Darmstadt, Germany). OchraTest clean‐up step immunoaffinity chromatography columns (IACs) were supplied by Vicam (Neogen Europe, Scotland, UK). Phosphate‐buffered saline (PBS) was obtained from Panreac (Panreac Química SA, Spain).
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5

HPLC-FLD Quantification of Ochratoxin A

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OTA quantification was performed in Agilent 1260 Infinity (Agilent Technologies, Santa Clara, CA, USA) equipment coupled to a fluorescence (FLD) detector (Agilent Technologies, Santa Clara, CA, USA). The column Zorbax SB C18 (2.1 mm × 50 cm × 1.8 µm; Agilent Technologies, Santa Clara, CA, USA) was used. The mobile phase was acetonitrile:water:acetic acid (50:100:1 v/v/v) with a flow rate of 0.1 mL/min. FLD detection was performed using 330 and 450 nm excitation and emission wavelengths, respectively. The calibration curve of OTA by HPLC-FLD revealed a linear relationship (r2 ≥ 0.99) between detector response and OTA standard (Sigma-Aldrich Co., San Luis, MO, USA) amounts between 0.5 and 50 ng/mL. The limit of detection (LOD) obtained in this study was 0.58 µg/kg, and the quantification limit (LOQ) was 1.94 µg/kg.
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6

Ochratoxin A Quantification Protocol

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OTA standard was purchased from Sigma-Aldrich (St. Louis, MO, USA). Standard solutions were prepared with proper dilutions of 100% methanol and stored in amber vials at −20°C. HPLC grade methanol and acetonitrile were purchased from Fisher Scientific (Pittsburgh, PA, USA) and acetic acid (99.5%) and phosphate-buffered saline (PBS) tablets were purchased from Sigma-Aldrich (St. Louis, MO, USA). OchraTest immunoaffinity columns (IAC) were obtained from VICAM (Watertown, MA, USA).
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7

Ochratoxin A Quantification Protocol

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The OTA standard and the U-[13C20]-OTA standard (internal standard, IS) used to prepare standard solutions for the validation of the analytical method were purchased from Sigma Aldrich (St Louis, MO, USA) and Or Sell (Limidi di Soliera (MO), Italy), respectively. Acetonitrile (LC-MS grade) and formic acid (LC-MS grade), methanol (LC-MS grade), n-hexane (analytical grade), and acetic acid (glacial) were purchased from Carlo Erba Reagents (Cornaredo, MI, Italy), Honeywell (Charlotte, NC, USA), Panreac Applichem (Barcellona, Spain), and Sigma Aldrich (St Louis, MO, USA), respectively. Ultrapure water used throughout the experiments was produced by an Evoqua Water Technologies system (Pittsburgh, PA, USA). Ochraprep® immunoaffinity columns from R-Biopharm AG (Darmstadt, Germany) were used for samples purification.
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8

Ochratoxin A Extraction and HPLC Analysis

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The chemicals and solvents used for OTA extraction and for HPLC analysis were analytical grade or HPLC grade. The OTA standard used to prepare standard solutions for the validation of the applied methodology was obtained from Sigma-Aldrich Co. (St. Louis, MO, USA). Immunoaffinity columns used for samples purification (OchraTest™ WB) were purchased from Vicam® (Milford, MA, USA). PBS buffer pH 7.0 used during sample clean up procedure was prepared by dissolving sodium chloride (8.0 g), sodium phosphate dibasic (1.2 g), potassium phosphate monobasic (0.2 g), and potassium chloride (0.2 g) in purified water so as to obtain 1 litre of buffer. Water, acetonitrile, isopropyl alcohol, dichloromethane, and methanol were purchased from Mallinckrodt Baker B.V. (Deventer, The Netherlands); citric acid, phosphoric acid, sodium bicarbonate, sodium chloride, sodium phosphate dibasic, potassium phosphate monobasic, and potassium chloride were purchased from Carlo Erba Reagents (Cornaredo, MI, Italy); acetic acid and ethyl acetate were obtained from Sigma-Aldrich Co. (St Louis, MO, USA).
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9

Quantification of Ochratoxin A in Grape-Based Cultures

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In order to determine the levels of OTA produced by the strains, three pieces of the grape-based medium were removed from the internal, middle and external areas of each colony during 21 days of incubation at 25 °C (day 3, 6, 15 and 21). The reagents used were all of high purity or HPLC grade (99.9%). For extraction, 1 mL of methanol (Sigma-Aldrich) was added, followed by vortex homogenization for 5 seconds and incubation at room temperature for 60 minutes. The extracts were filtered in PVDF - Polyvinylidene Fluoride (0.22 μm) filter units (Millipore), according to the methodology proposed by Bragulat, Abarca, and Cabañes60 (link) and then submitted for quantification. The standard curve was prepared using a stock solution previously prepared by dissolving the commercial OTA standard (Sigma-Aldrich) in methanol (1 μg/mL). Subsequently, standard solutions with concentrations of 3.75; 15.0; 30.0; 105.0 and 135.0 ng/mL were prepared by dilution. For the recovery assay, the grape-based culture medium was spiked at three levels with concentrations equal to 1.0 μg/g; 3.0 μg/g and 6.0 μg/g, in triplicates. The results of the recovery trials were 98.32% (±12.29), 97.23% (±7.07), and 97.47% % (±7.82), respectively.
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10

Quantification of Ochratoxin A in Fungi

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The isolate LAMAI 31 was grown on Yeast extract 15 % sucrose agar (YESA) at 25 °C for 7 days and evaluated for the production of OTA by the agar plug technique, which tests small samples from Petri dishes by thin layer chromatography (TLC) (Filtenborg et al. 1983 (link)). The TLC plates were developed in toluene/ethyl acetate/formic acid (5:4:1) and visualized under UV light at 365 nm. An OTA standard (Sigma Chemical Co., St Louis, USA) and A. carbonarius producing OTA were used for comparison.
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