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3 protocols using takinib

1

Immunohistochemical Analysis of Neuronal Signaling

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The antibodies and reagents used in this study were as follows: GFP (A6455; rabbit; Invitrogen; Chen et al., 2011 (link)); MAP2 (AB5622; rabbit; EMD Millipore; Chen et al., 2011 (link)); MAP2 (M4403; mouse; Sigma-Aldrich; Chen et al., 2011 (link)); SMI-312R (SMI-312R; mouse; Covance; Liu et al., 2013 (link)); HA (3F10; rat; Roche; Chen et al., 2017 (link)); phospho-P38 MAPK (9211; rabbit; Cell Signaling Technology); rabbit polyclonal P38 MAPK antibody (9212; rabbit; Cell Signaling Technology); phospho-ERK (4376; rabbit; Cell Signaling Technology); ERK (4695; rabbit; Cell Signaling Technology); phospho-JNK (9251; rabbit; Cell Signaling Technology); JNK (9252; rabbit; Cell Signaling Technology); phospho-TAK1 (9339; rabbit; Cell Signaling Technology); GAPDH (sc-25778; rabbit; Santa Cruz Biotechnology, Inc.; Chen et al., 2011 (link)); NeuN (MAB377; mouse; EMD Millipore; Wang et al., 2015 (link)); HRP-conjugated secondary antibodies (GE Healthcare); and Alexa Fluor 488– and Alexa Fluor 594–conjugated secondary antibodies (Invitrogen). Antibodies with validation profiles in Antibodypedia or 1DegreeBio are underlined. CL075, poly dT, poly(I:C) high molecular weight, and SB203580 were all purchased from InvivoGen. Takinib and NG 25 were purchased from Medchem Express, and (5Z)-7-oxozeaenol was purchased from Tocris.
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2

Inflammasome Activation Assay Protocol

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All reagents and solvents
were purchased from
commercial suppliers (Sigma-Aldrich, Alfa Aesar, Fluka, TCI America).
Ultrapure LPS, anti-IL-1β antibody, isoliquiritigenin, and MCC950
were purchased from Invivogen. All cell media, Hoechst 33342, DQ Green
BSA, and Alexa Flour 488-NHS were bought from Thermo Fischer Scientific.
Lysoview 633 was obtained from Biotium. APG-4 was purchased from TEFLabs,
monensin from Tocris, and filipin-III from Sigma-Aldrich. Propidium
iodide, FAM-YVAD-FMK kit (FAM FLICA Caspase-1), and cathepsin B MM-(RR)2 kit (Magic Red cathepsin B) were bought from Immunochemistry
Technologies. Ca-074-Me was obtained from Calbiochem. E 64d and (5Z)-7-Oxozeaenol
were from Tocris. Takinib was from Medchemexpress. Rabbit polyclonal
anti-TMS1 and donkey antirabbit IgG Alexa Fluor 647 antibodies were
purchased from Abcam. All peptide synthesis reagents were purchased
from Novabiochem. Fmoc-N-amido-dPEG6-acid linker was purchased
from Quanta Biodesign, and azidohexanoic acid was purchased from Click
Chemistry Tools.
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3

Reagents for Cellular Stress Signaling

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The following reagents were used in our study: collagen (Roche, Indianapolis, IN; 11179179001), G418 (Invitrogen, Carlsbad, CA), recombinant human TNFα (PeproTech, Rocky Hill, NJ; 300-01A), anisomycin (Fermentek, Jerusalem, Israel; AN), arsenite (Fluka, Ronkonkoma, NY; 71287). Sorbitol (S1876), sodium palmitate (P9767), puromycin (P7255), 5Z-7-Oxozeaenol (O9890), and cycloheximide (C7698) were all purchased from Sigma-Aldrich (St. Louis, MO). URMC-099 was purchased from AdooQ BioScience LLC (Irvine, CA; A14219). Takinib was purchased from MedChemExpress (Monmouth Junction, NJ; HY-103490). CEP-1347 was purchased from Tocris Bioscience (Bristol, UK; 4924).
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