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3 protocols using immu mount

1

Immunofluorescence Analysis of FFPE MCC Samples

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Formalin-fixed, paraffin-embedded (FFPE) sections from primary MCC tumors were prepared and analyzed as previously described (55 (link)). The primary antibodies were cytokeratin 20 (CK20) antibody (dilution 1:50 [Dako]), MCPyV LT antibody CM2B4 (dilution 1:125 [Santa Cruz Biotechnology]), and anti-stathmin 1 antibody (dilution 1:250 [Abcam]). An isotype-matched irrelevant antibody was used as a negative control on serial sections of tissues in parallel, Dako X0943 was used for the CK20 primary antibody, and the rabbit polyclonal isotype control antibody (Abcam) was used to match the stathmin primary antibody. Sections were incubated with appropriate secondary antibodies labeled with different fluorochromes: Alexa Fluor 488 IgG2B and Alexa Fluor 633 IgG2A [Invitrogen] and IgG (H+L)-tetramethyl rhodamine isocyanate (TRITC) (Jackson ImmunoResearch). Nuclear counterstaining was with bis-benzimide (Invitrogen). All slides were mounted with Immu-Mount, and images were captured with a Zeiss LSM 510 confocal microscope (56 (link)).
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2

Imaging HUVEC organelles and LDL trafficking

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HUVEC were seeded in a Nunc Lab-Tek II 8-Chamber Slide and treated with compounds for indicated time points. Cells were fixed with 4% paraformaldehyde for 203min at room temperature and then permeabilized with 0.5% Triton X-100 (for protein immunostaining) or 0.2% saponin (for co-staining with filipin) for 103min prior to blocking in a blocking buffer (3% bovine serum albumin (BSA) in PBS containing 0.1% Tween-20) for 13h. Cells were incubated with primary antibodies, including anti-LAMP1, anti-PDI, anti-mTOR and anti-GM130 in the blocking buffer overnight at 4°C, followed by the incubation with secondary antibodies conjugated with Alexa Fluor 488 or Alexa Fluor 647 for 13h at room temperature. The cellular nuclei were stained with Hoechst 33342 (Thermo Fisher Scientific). Cells were washed with PBS, mounted with Immu-mount, and observed under a Carl Zeiss LSM 710 confocal microscope. For the analysis of LDL trafficking, HUVEC were pretreated with DMSO or CEP for 8 h, and then 1,1′-dioctadecyl-3,3,3′,3′-tetramethyl-indocarbocyanine perchlorate-labeled LDL (DiI-LDL) (Thermo Fisher Scientific) was added to the cells. The incubation was continued for 1 h or 6 h before cells were fixed and co-stained with filipin or primary antibodies against LAMP1, PDI and mTOR.
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3

Immunofluorescence Staining of tPA in SKMEL28 Cells

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24 h after siRNA transfection, SKMEL28 cells were plated on glass slides and incubated in 10% serum-containing medium for 48 h. They were fixed for 5 min with 4% paraformaldehyde. The slides were washed with PBS and saturated in PBS-T with 5% BSA. Cells were then incubated for 1 h at room temperature with an anti-tPA antibody diluted 1/400 in PBS-T with 1% BSA. Slides were washed in PBS and cells were incubated for 30 min with the Alexa-488-conjugated secondary antibody diluted 1/1000 in PBS-T with 1% BSA. For immunocytofluorescence, experiment cells were mounted on slides using Immu-Mount® and studied using a Zeiss LSM 710® confocal laser scanning microscope with the 60x oil-immersion objective (Carl Zeiss microimaging, Germany).
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