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6 protocols using ab76959

1

Quantification of Glycolytic Enzymes

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Tissues were homogenised in lysis buffer (20 mM Tris, 1 mM EDTA and 0.25 mM sucrose, pH 7.4) and ultracentrifuged to obtain the membrane fractions. The amount of protein in the homogenate was quantified using the Bio-Rad Protein Assay, based on the Bradford method. Equivalent amounts of protein were resolved on an 8–12% SDS-PAGE and transferred onto a PVDF membrane (Immobilon-P transfer membrane, Millipore). Glycogen synthase was detected using the Abcam (EP817Y, ab40810) rabbit monoclonal anti-gys1 primary antibody. GLUT-4 was detected using the Abcam (mAbcam65267) anti-GLUT-4 primary antibody. Hexokinase II was detected using the Abcam (ab76959) mouse monoclonal Anti-Hexokinase II antibody. Glucose-6-phosphate isomerase was detected using the Abcam [1B7D7] (ab66340) mouse monoclonal Anti-Glucose-6-phosphate isomerase antibody. Glycogen phosphorylase was detected using the Abcam (ab88078). Monoclonal Anti-α-Tubulin antibody (Sigma–Aldrich) probed with the Polyclonal Rabbit Anti-mouse Immunoglobulins/HRP secondary antibody (Dako Cytomation) were used for the determination of the loading controls.
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2

Immunohistochemical Analysis of Kidney Metabolic Markers

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Paraffin-embedded kidney sections were deparaffinized, hydrated, antigen retrieved, and endogenous peroxidase activity was quenched by 3% vol./vol. H2O2. Sections were then blocked with 10% vol./vol. normal donkey serum, followed by incubation with anti-PPARα (ab24509, Abcam), anti-CPT1α (ab128568, Abcam), anti-HIF-1α (NB100-123, Novus, New York, NY, USA), anti-HK2 (ab76959, Abcam), or anti-phospho-LDH (8176S, Cell Signaling Technology) overnight at 4 °C. After wash, sections were incubation with secondary antibody for 1 h, followed by incubation with avidin–biotin complex reagents for 1 h at room temperature before being subjected to substrate 3-amino-9-ethylcarbazole (Vector Laboratories, Burlingame, CA, USA). The percentage of positive cells to the selected field was analyzed using Image Pro Plus 6.0 software. An average percentage for each section was calculated. At least ten randomly chosen fields under the microscope were evaluated for each sample, and an average score was calculated.
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3

Antibody Validation for Protein Analysis

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Antibodies against HPV16 E6, HPV16 E7, GFP, LKB1, and PCNA were purchased from Santa Cruz (Santa Cruz, CA). Mouse monoclonal anti-HPV16 E7 antibody (716-281) purchased from Thermo Scientific (Rockford, IL) was also used for some immunoblots. Antibodies against c-MYC (ab69987), TIGAR (ab37910), LKB1 (ab15095), and HK-II (ab76959) were purchased from Abcam (Cambridge, MA). Antibody against phospho-ACC (S79) was purchased from Millipore Inc. (Lake Placid, NY). Anti- phospho-mTOR (Ser2448), phospho-S6 (S240/244), phospho-AKT (S473), LKB1 (#3050), HK-I (#2024), HK-II (#2867), PDH (#3205), and PKM2 (#3198) antibodies were purchased from Cell Signaling Technology, Inc. (Boston, MA). GAPDH polyclonal antibody was obtained from Bethyl Laboratories (Montgomery, TX).
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4

Protein Expression Analysis in Tumor Cells

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Protein extraction was performed in Radioimmunoprecipitation assay buffer (RIPA) (Auragene, Changsha, China) and centrifuged at 13000 rpm for 20 min at 4 °C. Protein concentrations were determined using a BCA protein assay kit (Auragene, Changsha, China). Proteins were separated on 10% SDS-PAGE gels and then blotted onto nitrocellulose membranes, and probed with Anti-Girdin antibodies (1:1000; ab179481, ABcam); Anti-Glut1 antibodies (1:1000; ab12939, ABcam); Anti-LDHA antibodies (1:2000; ab125683, ABcam); Anti-Hexokinase II antibodies (1:1000; ab76959, ABcam); Anti-HIF1α antibodies (1:2000; ab65069, ABcam); Akt polyclonal antibodies (1:2000; YT0175, Immunoway); Phospho-Akt (T308) polyclonal antibodies (1:2000; YP0007, Immunoway); and Anti-PI3 Kinase p85 antibodies (1:1000; 4292, Cell signaling), followed by the appropriate horseradish peroxidase-conjugated secondary antibodies (Auragene, Changsha, China). Immunodetection was accomplished via the ECL plus western blotting detection system (Auragene, Changsha, China). The signal intensity was determined using the IPP6.0 software. Immunoblotting with anti-β-actin antibodies (1:500) was performed as an internal control.
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5

Protein Expression Analysis in Kidney Tissue

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Cells were lysed in 1 × SDS sample buffer. Kidney tissue was homogenized by a polytron homogenizer (Brinkmann Instruments) in RIPA lysis buffer on ice. The supernatants were collected after centrifugation at 13,000 × g at 4 °C for 30 min. Protein concentration was determined by bicinchoninic acid protein assay. An equal amount of protein was loaded into 10% or 15% wt/vol. SDS-PAGE, and transferred onto polyvinylidene difluoride membranes. The primary antibodies were as follows: anti-PPARα (ab24509, Abcam, Cambridge, MA, USA), anti-CPT1α (ab128568, Abcam), anti-ACADL (ab196655, Abcam), anti-HK2 (ab76959, Abcam), anti-LDH (3558, Cell Signaling Technology, Danvers, MA, USA), anti-PDK1 (ab110025, Abcam), anti-HIF-1α (ab1, Abcam), anti-PHD2 (4835, Cell Signaling Technology), and anti-tubulin (T6074, Sigma Aldrich). Western blot was performed at least three times independently. Chemiluminescence is applied for detecting proteins on western blot membranes. The enhanced chemiluminescent ECL substrate (32209, Thermofisher Scientific, Carlsbad, CA, USA) enables immunodetection of horseradish peroxidase (HRP)-conjugated secondary antibodies using an imaging system. Quantification was performed by measurement of the intensity of the signals with the aid of Image J software package.
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6

Antibody Validation for Protein Analysis

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Antibodies against HPV16 E6, HPV16 E7, GFP, LKB1, and PCNA were purchased from Santa Cruz (Santa Cruz, CA). Mouse monoclonal anti-HPV16 E7 antibody (716-281) purchased from Thermo Scientific (Rockford, IL) was also used for some immunoblots. Antibodies against c-MYC (ab69987), TIGAR (ab37910), LKB1 (ab15095), and HK-II (ab76959) were purchased from Abcam (Cambridge, MA). Antibody against phospho-ACC (S79) was purchased from Millipore Inc. (Lake Placid, NY). Anti- phospho-mTOR (Ser2448), phospho-S6 (S240/244), phospho-AKT (S473), LKB1 (#3050), HK-I (#2024), HK-II (#2867), PDH (#3205), and PKM2 (#3198) antibodies were purchased from Cell Signaling Technology, Inc. (Boston, MA). GAPDH polyclonal antibody was obtained from Bethyl Laboratories (Montgomery, TX).
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