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7 protocols using j rt3 t3

1

Characterization of Immune Cell Lines

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J.RT3-T3.5 and Jurkat (Clone E6–1) cell lines used for counter selection and nucleofection, respectively, were purchased from ATCC. The Epstein-Barr virus transformed lymphoblastoid cell line (TM-LCL) used in the rapid expansion protocol (REP) of T cells was made from mononuclear cells as previously described.57 CD19+ and OKT3+ K562 cells used for functional assays were generated by lentivirally transducing parental K562 parental cells (ATCC) with CD19- or OKT3-expressing constructs. Raji parental cells were also purchased from ATCC. All the above cell lines were cultured in RPMI 1640 medium (Gibco) with 10% heat-inactivated FBS (Life Tech and VWR). Human peripheral blood mononuclear cells (PBMCs) were isolated from Leukocyte Reduction System (LRS) cones (Bloodworks Northwest) using Ficoll-Paque density gradient centrifugation (GE). Mixed or CD8+ T cells used in non-isolation experiments were a generous gift from Juno Therapeutics. Rhesus PBMCs were a generous gift from Dr. Agne Taraseviciute (Seattle Children’s Research Institute).
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2

Generation of HEK-293T-I-Ag7 Cell Line

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The HEK-293T-I-Ag7 cell line was generated by sequential transduction of HEK-293T (ATCC, #CRL-11268) cells with lentivirus encoding for I- Aαd/CFP , I- Aβg7/GFP , HLA-DMα/β/GFP, and human CD74 (invariant chain -Ii-) fused to human CD80 (hCD80) with sequential flow cytometry-based cell-sorting guided by CFP fluorescence (reporting I- Aαd expression), GFP (reporting DMα/β expression), anti-hCD80 (reporting Ii, expression), and anti-I-Ag7 (reporting I- Aαd /I- Aβg7 heterodimer expression).
4.1- and BDC2.5-JurMA cells [derived from the TCRβ-null Jurkat cell line J.RT3-T3.5 (ATCC) and carrying a NFAT-driven luciferase reporter] were generated by transducing JurMA cells with retroviruses encoding monocistronic, P2A-tethered TCRα-TCRβ chains.
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3

Cell Culture Conditions for Cell Lines

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SW620 (ATCC), Lenti-X 293T (Takara Bio), and A375 (ATCC) cell lines were cultured in DMEM media containing 10% FBS, penicillin, and streptomycin. NCI-H441 (ATCC) and Jurkat that has the TCR beta-chain-deficient mutant (J.RT3-T3.5, ATCC) were cultured in RPMI-1640 containing 10% FBS, penicillin, and streptomycin.
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4

Characterization of Immune Cell Lines

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J.RT3-T3.5 and Jurkat (Clone E6–1) cell lines used for counter selection and nucleofection, respectively, were purchased from ATCC. The Epstein-Barr virus transformed lymphoblastoid cell line (TM-LCL) used in the rapid expansion protocol (REP) of T cells was made from mononuclear cells as previously described.57 CD19+ and OKT3+ K562 cells used for functional assays were generated by lentivirally transducing parental K562 parental cells (ATCC) with CD19- or OKT3-expressing constructs. Raji parental cells were also purchased from ATCC. All the above cell lines were cultured in RPMI 1640 medium (Gibco) with 10% heat-inactivated FBS (Life Tech and VWR). Human peripheral blood mononuclear cells (PBMCs) were isolated from Leukocyte Reduction System (LRS) cones (Bloodworks Northwest) using Ficoll-Paque density gradient centrifugation (GE). Mixed or CD8+ T cells used in non-isolation experiments were a generous gift from Juno Therapeutics. Rhesus PBMCs were a generous gift from Dr. Agne Taraseviciute (Seattle Children’s Research Institute).
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5

Establishing Jurkat-CD8-NFAT Reporter Cell Line

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Cell lines were cultured in Roswell Park Memorial Institute (RPMI)-1640 (T2 and J.RT3-T3.5), or DMEM (293T, CaSki, and SCC90) or MEM (SK-MEL-28), supplemented with 10% Fetal Bovine Serum (Lonsera) and 1% penicillin/streptomycin (Life Technologies). T2, 293T, SK-MEL-28, and J.RT3-T3.5 cell lines were purchased from American Type Culture Collection (ATCC)CaSki and SCC90 cell lines were purchased from CTCC. CaSki is an HPV16+ cervical cancer cell line. SCC90 is an HPV16+ head and neck squamous cell carcinoma cell line. All cell lines used in the experiments were mycoplasma-free.
HPV16 E6, HPV16 E7, and HLA-A*11:01 heavy chain genes were synthesized and constructed into pLKO.1puro (addgene 8453) lentiviral vectors under EF-1α promoter. P2A-linked GFP was used as the reporter gene.
The J.RT3-T3.5 cell line was used to generate Jurkat-CD8-NFAT (JK8NF) reporter cell line. First, J.RT3-T3.5 cells were transduced with lentiviral particles carrying the pLenti-human CD8 (hCD8) transfer plasmid and sorted by FACS based on high CD8 expression (Jurkat-CD8 cells). Next, the Jurkat-CD8 cells were transduced with lentiviruses encoding the nuclear factor of activated T cells (NFAT)-inducible ZsGreen reporter genes.29 (link) Finally, JK8NF clones were selected based on a strong ZsGreen signal following Phorbol-12-myristate-13-acetate (PMA)/ionomycin stimulation.
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6

Latent HIV-1 Model Cell Lines

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J1.1 (derived from Jurkat) [43 (link)] and ACH-2 (derived from A3.01) cells [44 (link)], which harbor the latent HIV-1 LAV strain and their parental Jurkat and A3.01 cells, Jβ2.7 cells (LFA-1α-deficient Jurkat cells) [45 (link)], and J.RT3-T3.5 (TCR β chain-deficient Jurkat cells) (American Type Culture Collection, Manassas, VA, USA) were grown in RPMI1640 medium supplemented with 10% fetal bovine serum (FBS). HS-5 and HS-27A cells (human stromal cell lines derived from bone marrow) (American Type Culture Collection) were grown in Dulbecco’s modified Eagle’s medium and RPMI1640 medium, supplemented with 10% FBS.
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7

Isolation of Human CD4+ T Cells

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Human peripheral blood mononuclear cells (PBMCs) were isolated from the blood using a Ficoll-Paque PLUS (GE Amersham) gradient. CD4+ T cells were isolated using magnetic beads conjugated with the anti-CD4 Ab and a magnetic column (Miltenyi Biotec). Jurkat cells [10] (link) and J.RT3-T3.5 [11] (link), [12] (link) were purchased from the American Type Culture Collection (ATCC).
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