The largest database of trusted experimental protocols

375 protocols using tecnai g2 spirit

1

Transmission Electron Microscopy Workflow

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were collected and fixed with 2.5% glutaraldehyde. Subsequently, cells were postfixed in 2% tetroxide and dehydrated through a series of gradient ethanol solutions. Samples were embedded in epoxy resin, cut into thin slices, and placed onto a nickel grid. Images were acquired using a Tecnai G2 Spirit transmission electron microscope (Thermo Fisher).
+ Open protocol
+ Expand
2

Cryo-EM Structure of 26S Proteasome

Check if the same lab product or an alternative is used in the 5 most similar protocols
Negative stain data collection was carried out on a Tecnai G2 Spirit transmission EM (Thermo Fisher Scientific, FEI) operating at 120 kV. Images were collected at a nominal magnification of 105,000 (3.1-Å pixel size) within a −0.5- to −3.0-μm defocus range. For 26S proteasome alone, 100 micrographs were collected, and particle selection was performed using autopicking command in RELiON-3.0-beta2 (62 (link)), yielding 29,585 particle projections. For 26S proteasome complexed with circPABPC1 and ITGB1, 100 micrographs were collected, and 33,465 particles were autopicked in RELiON. Each dataset was subjected to reference-free 2D classification.
+ Open protocol
+ Expand
3

Phage Visualization by Negative Staining

Check if the same lab product or an alternative is used in the 5 most similar protocols
One drop of purified phage suspension was adsorbed to a Formvar/carbon-coated 200-mesh copper grid for 10 min and negatively stained with 2% (wt/L) phosphotungstic acid in the dark for 30 s. After 30 min of drying, the grid was examined using a JEM-2100 transmission electron microscope (JEOL, Japan) or a Tecnai G2 Spirit transmission electron microscope at 120 KeV (Thermo Fisher Scientific, USA). Images were captured using a GATAN INC CCD image transmission system.
+ Open protocol
+ Expand
4

Ultrastructural Analysis of Cellular Organelles

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells in culture were either starved for 6 h (for LYS analysis) or treated with CCCP (20 µM) for 6 h (for mitophagy analysis) followed by fixation in 2.5% glutaraldehyde at 4°C overnight. Fly brain tissues (3- and 30-d-old) and mouse brain tissues were dissected and fixed in 2.5% glutaraldehyde at 4°C overnight. Subcellular fractions were fixed in 2.5% glutaraldehyde at RT for 1 h. All samples were postfixed in 2% OsO4 (Electron Microscopy Sciences). After dehydration with a graded series of acetones, samples were infiltrated in acetone/resin (1:1) and embedded in Epon (Sigma-Aldrich). Slides of ultrathin sections (70 nm) were double stained with uranyl acetate (Ted Pella) and lead nitrate (Sigma-Aldrich). Images were taken by using the transmission electron microscope Tecnai G2 Spirit (Thermo Fisher Scientific) equipped with an Eagle 4k HS digital camera.
+ Open protocol
+ Expand
5

Transmission Electron Microscopy of EVs

Check if the same lab product or an alternative is used in the 5 most similar protocols
EV were fixed with 2% phosphotungstic acid at 4 °C, air-dried, observed under a TEM at 80 kV (FEI Tecnai G2 Spirit, Thermo Scientific, USA) and analyzed by western blot [30 (link)].
+ Open protocol
+ Expand
6

Isolation and Characterization of Extracellular Vesicles

Check if the same lab product or an alternative is used in the 5 most similar protocols
The HiPSC-ECs were cultured to 70% confluency, and the supernatant was collected and centrifuged at 2,000 g for 10 min at 4°C to remove the residual cells and debris followed by another centrifugation at 100,000 g for 1 h at 4°C. Afterward, the EV pellets were resuspended in 50–100 μl of phosphate-buffered saline (PBS). EVs were visualized with a transmission electron microscopy (FEI Tecnai G2 Spirit, ThermoFisher Scientific, Waltham, MA, USA) directly or an inverted fluorescence microscope (Olympus FV3000). The diameter distribution of EVs was determined by NanoSight (Malvern Instruments Inc., Malvern, UK). Some specific protein markers, such as CD9, CD63, and TSG101, were identified by Western blotting analysis.
+ Open protocol
+ Expand
7

Exosome Negative Staining Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
Exosomes were dropped onto the copper grid and negatively stained with 2% phosphotungstic acid for 2 min. After air-drying, the samples were observed using a transmission electron microscope (FEI Tecnai G2 Spirit, Thermo Scientific, USA) at 80 kV.
+ Open protocol
+ Expand
8

Ultrastructural Analysis of Colonic Tissue

Check if the same lab product or an alternative is used in the 5 most similar protocols
Karnovsky fixed colonic samples were further processed by post-fixation at 4 °C with 1% osmium tetroxide in sodium cacodylate (0.1 M) containing potassium ferrocyanide (0.8%) and subsequently dehydrated with ethanol. In the final step, fixed colonic tissue was infiltrated, embedded and polymerized into Epon resin for at least 48 h at 60 °C. Ultrathin sections (70 nm thick) were cut using an ultramicrotome (Ultracut UC6, Leica Microsystems). For TEM imaging, saline (N = 4) and UP-exposed (N = 6) colonic samples were randomly selected and imaged. For human samples, control (N = 2) and NEC (N = 2) colonic samples were used. The ultrathin-cut sections were mounted on Formvar-coated copper grids (single slot grids) and subsequently stained with 2% uranyl acetate in 50% ethanol and lead citrate. The TEM-prepared colonic samples were imaged using a Tecnai G2 Spirit transmission electron microscope with a CCD Eagle camera (4 k × 4 k camera; Thermo Fisher Scientific).
+ Open protocol
+ Expand
9

Exosome Visualization via Negative Staining

Check if the same lab product or an alternative is used in the 5 most similar protocols
For electron microscopy analysis, exosomes were dropped onto the copper grid and negatively stained by 2% phosphotungstic acid for 2 min. After air-drying for 15 min, the samples were observed under a transmission electron microscope (FEI Tecnai G2 Spirit, Thermo Scientific, USA) at 80 kV.
+ Open protocol
+ Expand
10

Mitochondrial Morphology Analysis by TEM

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cell or tissue samples were collected and fixed with 4% pre-cooled glutaraldehyde (Sigma-Aldrich Chemical, St. Louis, USA) overnight at 4 °C, followed by PBS washing on the next day. A series of treatments were subsequently applied, including 1% osmic acid fixing, water washing, 2% uranyl acetate staining, gradient concentration ethanol, and acetone dehydrating. Consequently, the dehydrated samples were embedded and sliced into 100 nm samples. The morphologies of mitochondria were observed by TEM (Tecnai G2 spirit, Thermo Fisher Scientific, Waltham, USA). Mitochondria with healthy morphology were counted and the area and perimeter of mitochondria were quantified by Image J software (six independent lung sections for each group).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!