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Amphotericin b

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Amphotericin B is a broad-spectrum antifungal agent used in microbiology and cell culture applications. It is a polyene macrolide antibiotic that binds to ergosterol, a component of fungal cell membranes, leading to increased permeability and cell death.

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1 730 protocols using amphotericin b

1

Cell Culture Protocol for A549 Cells

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Dulbecco’s modified Eagle medium nutrient mixture/F-12 medium (DMEM-F12) containing L-glutamine, penicillin/streptomycin solution, and Corning regular fetal bovine serum (FBS) were purchased from (Fisher Scientific, Grand Island, NY, USA), Penicillin/Streptomycin (Pen-Strep) (Fisher Scientific, Grand Island, NY, USA), and Amphotericin-B were also obtained from (Fisher Scientific, Grand Island, NY, USA). Climbazole (Tokyo Chemical Industry, Tokyo, Japan) and Heparin sodium salt (EMD Millipore Corporation, Burlington, MA, USA) were the inhibitors used in this study. Unless otherwise indicated, all other drugs were purchased from commercial sources. A549 cells were used in this study. A549 cells were obtained from (American Type Culture Collection, Manassas, VA, USA). Cells were cultured in DMEM-F12 (Fisher Scientific, Grand Island, NY, USA) supplemented with 10% FBS, 1% Pen-Strep, and 0.2% Amphotericin-B (0.5 μg/mL). For virus infection, DMEM exosome-free media was prepared with exosome-depleted FBS using DMEM/F12 medium containing L-glutamine supplemented with 2% exosome-free Corning FBS, 1% Pen-Strep, and 0.2% Amphotericin-B (0.5 μg/mL) (Fisher Scientific, Grand Island, NY, USA). Cells were cultured at 37°C in a humidified atmosphere supplemented with 5% CO2.
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2

Cell Culture Conditions for Cancer Cell Lines

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MCF7, MDA-MB-231, and SKOV3 cells were obtained from the Russian cell culture collection (Russian Branch of the ETCS, St. Petersburg, Russia). MDA-MB-231 cells were grown in Leibovitz media (L15, Sigma-Aldrich) supplemented with 10% fetal bovine serum (FBS; Gibco BRL Co., Gaithersburg, MD, USA), 2 mM l-glutamine, 250 mg/mL amphotericin B, and 100 U/mL penicillin/streptomycin. MCF7 cells were cultivated in Iscove’s modified Dulbecco’s media (IMDM; Sigma-Aldrich) with 10% FBS (Gibco BRL Co., Gaithersburg, MD, USA), 2 mM l-glutamine (Sigma-Aldrich), 250 mg/mL amphotericin B, and 100 U/mL penicillin/streptomycin (Gibco BRL Co., Gaithersburg, MD, USA). SKOV3 cells were grown in Dulbecco’s Modified Eagle Medium: Nutrient Mixture F-12 (DMEM:F12, Sigma-Aldrich) supplemented with 10% fetal bovine serum (FBS; Gibco BRL Co., Gaithersburg, MD, USA), 2 mM l-glutamine, 250 mg/mL amphotericin B, and 100 U/mL penicillin/streptomycin.
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3

Culturing HEK293T and Immortalized hAEC Cells

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HEK293T cells were purchased from GeneHunter and cultured on collagen-coated dishes (Nunc) in DMEM (Gibco) supplemented with 10% fetal bovine serum (Gibco), 100 U/ml penicillin and streptomycin, and 2.5 ng/ml amphotericin B (Gibco).
Previously established immortalized hAEC line cells were used30 (link). Briefly, primary human amniotic epithelial cells from five different donors were immortalized by using an SV40 lentiviral vector (pLenti-SV40-T + t, Applied Biological Materials Inc., Richmond, BC Canada). The established immortalized hAEC lines were morphologically evaluated, and one line (iAE129) was selected and used for further studies.
iAECs were cultured in DMEM supplemented with 10% fetal bovine serum (Nichirei), 200 μM l-glutamine (Gibco), 1 × nonessential amino acids (Gibco), 5.5 µM 2-mercaptoethanol (Gibco), 5 ng/ml EGF (PeproTech), 100 U/ml penicillin and streptomycin, and 2.5 ng/ml amphotericin B.
All cells were cultured in 5% CO2 at 37 °C.
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4

Transient Transduction of Adherent Cells with IFITM Vectors

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To transiently transduce adherent cell lines, we seeded cells at a density of 104 cells per well in 96-well plates. The adherent cells were transduced with IFITM-encoding vectors by spinoculation [29 (link)] at 4000g for 30 minutes and incubated for 48 hours. Thereafter, the culture supernatants were replaced by 50 µL of fresh medium. Subsequently the cells were inoculated with 50 µl of luciferase-normalized vectors harboring the viral GP under study and incubated for 8 hours. Afterward, the supernatants were replaced with 150 µL of fresh culture medium, and luciferase activity in cell lysates was measured 72 hours after transduction using a commercially available kit (Promega; PJK). To analyze the effect of amphotericin B on the antiviral activity of IFITM proteins, we treated 293T cells with 10 µmol/L amphotericin B (Fisher Bioreagents) for 1 hour at 37°C before transduction with luciferase-encoding vectors.
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5

Differentiating NSC-34 Motor Neurons

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The NSC-34 motor neuron cell line (CELLutions Biosystems Inc., Ontario) was maintained in growth media consisting of DMEM supplemented with 10% FBS, 4 mM I-glutamine (Gibco), 2.5 µg/ml amphotericin B (Fisher Scientific) and 100 U/ml penicillin/100 µg/ml streptomycin (Gibco). Cells were sub-cultured every 3–4 days prior to reaching confluence. To differentiate, the cells cultures were switched to differentiation media consisting of Neurobasal (Gibco), 4 mM I-glutamine (Gibco), 2.5 µg/ml amphotericin B (Fisher Scientific), 100 U/ml penicillin/100 µg/ml streptomycin (Gibco).
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A549 Cell Culture for Virus Infection

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A549 were used in this study. A549 cells were obtained from (American Type Culture Collection, Manassas, VA, USA). The cells were cultured in Dulbecco's modified Eagle medium nutrient mixture/F-12 medium (DMEM-F12) (Fisher Scientific, Grand Island, NY, USA) containing L-glutamine supplemented with 10% Corning regular fetal bovine serum (FBS) (Fisher Scientific, Grand Island, NY, USA), 1% penicillin/streptomycin (Fisher Scientific, Grand Island, NY, USA), and 0.2% amphotericin-B (0.5 μg/mL) (Fisher Scientific, Grand Island, NY, USA). For virus infection, DMEM exosome-free media was prepared with exosome-depleted FBS using DMEM/F12 medium containing L-glutamine supplemented with 2% exosome-free Corning FBS, 1% penicillin/streptomycin, and 0.2% amphotericin-B (0.5 μg/mL) (Fisher Scientific, Grand Island, NY, USA). Cells were cultured at 37°C in a humidified atmosphere supplemented with 5% CO2.
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7

Lung Tissue Cryopreservation Protocol

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). Briefly, specimens were transported in CO 2 -idepenent medium (Thermo Fisher Scientific) supplemented with 1% BSA (Carl Roth), 1% penicillin & streptomycin (Fisher Scientific) and 1% Amphotericin B (Fisher Scientific). Upon reception, tissue pieces were carefully inflated with ice-cold HBSS (Fisher Scientific), supplemented with 2mM EDTA (Thermo Fisher Scientific), 1% BSA (Carl Roth), 1% penicillin & streptomycin (Fisher Scientific) and 1% Amphotericin B (Fisher Scientific).
Exemplary samples of the different areas of the lung piece were collected for subsequent histological analysis. The pleura was removed from the remaining tissue, and airways and vessels separated from the parenchyma as much as possible. The parenchymal airway and vessel-free fractions were minced, transferred to cryo-tubes, covered with ice-cold freezing medium [70% DMEM, high glucose with GlutaMAX TM (Thermo Fisher Scientific), 20% FBS (Gibco) and 10% DMSO (Carl Roth)], kept on ice for 15 min, and transferred to -80ºC in Mr. Frosty TM containers (Nalgene) to ensure a gradual temperature decrease (1ºC/min). For long-term storage, samples were kept in liquid nitrogen.
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8

Virus Isolation from Partridge Tissues

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For virus isolation, Vero cells (ATCC CCL-81) and Aedes albopictus clone C6/36 cells (ATCC CRL-1660) were used. Heart and brain samples from partridge no. 7, which showed the lower Ct values (20.4 and 21.52, respectively), were chosen for virus isolation. Tissue samples were homogenized at 20% (w/v) in PBS containing penicillin, streptomycin and amphotericin B (antibiotic-antimycotic), used according to the manufacturer’s instructions (Gibco, Waltham, MA, USA). Following centrifugation (3000× g, 10 min, 4 °C), the supernatant was filtered through a 0.45-µm-pore-size filter (Millipore Express, Darmstad, Germany) and used to inoculate sub-confluent (70%) Vero and C6/36 cells, maintained in Eagle’s medium supplemented with 5% FBS, penicillin, streptomycin, and amphotericin B (antibiotic-antimycotic used at 1:100, Gibco), and 50 µg/mL gentamicin (Gibco), incubated, respectively, at 37 °C and 28 °C in a humidified atmosphere with 5% CO2 and observed daily for cytopathic effect (CPE) in a phase-contrast microscope. Three passages were done for both samples.
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9

Isolation of Herpesviruses from Hares

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Isolation of herpesvirus was attempted from organs of hares coinfected with MYXV and LeHV-5, namely from liver and spleen, penile and vulva samples. In addition, liver and spleen samples from two hares with single herpesvirus infection, were also used.
Samples were homogenized at 20% in phosphate-buffered saline containing penicillin, streptomycin and amphotericin B (antibiotic-antimycotic), used according to the manufacturer (Gibco, Life Technologies Corporation). Following centrifugation, the supernatant was filtered through a 0.45-μm-pore-size filter (Millipore Express) and used to inoculate sub 70% confluent Candrel R Feline Kidney (CRFK) epithelial cells (ATCC-CCL-94), Vero cells (ATCC No. CRL-1986), Rabbit Kidney (RK13) cells (ATCC-CCL-37) and Hella cells (ATCCNo. CRM-CCL-2)- RK13 cells grown in Eagle medium and the others in Dulbecco's modified Eagle's Media was supplemented with 10% foetal calf serum (Gibco), penicillin, streptomycin and amphotericin B (antibiotic-antimycotic used at 1:100), 50μg/ml gentamicin (Gibco). Cells were maintained at 37°C under humidified atmosphere with 5% CO2 and observed daily for cytopathic effect (CPE) by phase contrast microscopy. Three passages were carried out. The supernatant and cell pellet of each passage were tested for the presence of herpesvirus by PCR [17 (link)].
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10

Isolation and Characterization of Myxoma Virus

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Isolation of MYXV from the rabbits’ tissues (15758PT20, 20545PT20 and 22660PT20) was achieved separately from eyelid, genitalia and lung. Samples were homogenised at 20% (w/v) in PBS containing penicillin, streptomycin and amphotericin B (antibiotic-antimycotic), used according to the manufacturer (Gibco, Massachusetts, EUA). Following centrifugation (3000× g, 10 min), the supernatant was filtered through a 0.45-μm-pore-size filter (Millipore Express, Darmstad, Germany) and used to inoculate sub confluent (70%) Rabbit Kidney (RK13) cells (ATCC-CCL-37). RK13 cells were grown in Eagle´s medium supplemented with 5% foetal calf serum (Gibco), penicillin, streptomycin and amphotericin B (antibiotic-antimycotic used at 1:100, Gibco) and 50 μg/mL gentamicin (Gibco). Cells were maintained at 37 °C under humidified atmosphere with 5% CO2 and observed daily for cytopathic effect (CPE) by phase contrast microscopy. The supernatant and cell pellet of each passage were tested for the presence of MYXV by qPCR [17 (link)].
The isolation of the virus allowed verifying its viability in the rabbit tissues, inferred by the cytopathic effect and in-house immunofluorescence protocol using MYXV positive hare serum (protocol available on request). The photographs were taken using an Inverted research microscope, Nikon Eclipse Ti (Nikon Instruments Europe, Amsterdam, Netherlands).
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