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6 protocols using clone m3 84

1

Quantifying Perivascular AQP4 Loss

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Mice were sacrificed under deep anesthesia by intracardial perfusion with PBS followed by perfusion with 4% w/v paraformaldehyde solved in PBS. Brains, spinal cords, optic nerves, kidneys and spleens were removed and fixed in 4% paraformaldehyde overnight. Cervical, thoracic, and lumbar spinal cord was cut into 11–12 4 mm thick transverse segments prior to embedding; 5 μm thick sections were stained for hematoxylin and eosin (H&E) and Luxol-fast blue/periodic acid-Schiff. Immunohistochemistry was performed using a biotin-streptavidin peroxidase technique (K5001; Dako) and an automated immunostainer (AutostainerLink 48; Dako). Sections were pretreated in a steamer (treatment solutions pH 6.0 or 9.0; Dako) before incubation with the primary antibodies anti-Mac3 (clone M3/84, 553322, 1:100; BD Pharmingen), anti-CD3 (MCA 1477, 1:50; Serotec), and anti-AQP4 (HPA014784, 1: 4000; Sigma). DAB was used as a chromogen and sections were counterstained using hematoxylin.
To quantify the perivascular loss of immunoreactivity against AQP4, three consecutive brain sections per mouse were analyzed using Image J (NIH) [49 (link)]. The sizes of areas showing AQP4 loss and the corresponding vessel lumen were measured and processed as individual ratios (any ratio > 1 indicates perivascular AQP4 loss).
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2

Quantifying Perivascular AQP4 Loss

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Mice were sacrificed under deep anesthesia by intracardial perfusion with PBS followed by perfusion with 4% w/v paraformaldehyde solved in PBS. Brains, spinal cords, optic nerves, kidneys and spleens were removed and fixed in 4% paraformaldehyde overnight. Cervical, thoracic, and lumbar spinal cord was cut into 11–12 4 mm thick transverse segments prior to embedding; 5 μm thick sections were stained for hematoxylin and eosin (H&E) and Luxol‐fast blue/periodic acid‐Schiff. Immunohistochemistry was performed using a biotin‐streptavidin peroxidase technique (K5001; Dako) and an automated immunostainer (AutostainerLink 48; Dako). Sections were pretreated in a steamer (treatment solutions pH 6.0 or 9.0; Dako) before incubation with the primary antibodies anti‐Mac3 (clone M3/84, 553322, 1:100; BD Pharmingen), anti‐CD3 (MCA 1477, 1:50; Serotec), and anti‐AQP4 (HPA014784, 1: 4000; Sigma). DAB was used as a chromogen and sections were counterstained using hematoxylin.
To quantify the perivascular loss of immunoreactivity against AQP4, three consecutive brain sections per mouse were analyzed using Image J (NIH) 49. The sizes of areas showing AQP4 loss and the corresponding vessel lumen were measured and processed as individual ratios (any ratio > 1 indicates perivascular AQP4 loss).
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3

Histological Evaluation of Atherosclerotic Lesions

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After the autoradiography, serial aortal cryosections were stained with hematoxylin-eosin (H&E) or Movat’s pentachrome for general histology. The percentages of positive immunostaining in each atherosclerotic lesion were plotted against the normalized tracer accumulation measured by digital autoradiography. Photomicrographs of the immunostained sections were captured with a Pannoramic 250 Flash digital slide scanner (3DHISTECH Ltd., Budapest, Hungary), stain contrast was digitally enhanced, and the densities of the positive immunostainings in separate plaques were analyzed with Image-J software v. 1.46 (National Institutes of Health, Bethesda, MD, USA). For enumeration of activated macrophages and MMP-9 detecting immunohistochemistry, the cryosections were incubated with rat anti-mouse Mac-3 antibody at a 1:5000 dilution (product number: 550292, Clone M3/84, BD Pharmingen, Franklin Lakes, NJ, USA), or rabbit polyclonal anti-MMP-9 antibody at a 1:1000 dilution (ab38898, Abcam, Cambridge, UK), with the horseradish peroxidase-conjugated secondary antibody being finally visualized using 3,3-diaminobenzidine (DAB).
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4

Multimodal Histological Characterization

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Bielschowsky silver impregnation and Luxol fast blue periodic acid Schiff (LFB‐PAS) staining were performed according to standard procedures. Primary antibodies utilized for immunohistochemistry were against injured axons (APP, 1:2,000, clone 22C11, Chemicon) and nonphosphorylated neurofilaments (SMI32, 1:1,000, Covance, Princeton, NJ, USA), healthy phosphorylated neurofilaments/axons (SMI31, 1:10,000, Covance, Princeton, NJ, USA), myelin basic protein (MBP, 1:2,000, Dako), activated microglia (Mac3, also known as Lamp2, 1:200, clone M3/84, BD Pharmingen), glial fibrillary acidic protein (GFAP, 1:1,000, Dako), and foamy monocytes and macrophages (CD68, 1:5,000, clone KiM1P). Biotinylated secondary antibodies (GE Healthcare, Jackson ImmunoResearch and DCS Innovative diagnostic system), peroxidase conjugated avidin and DAB (Sigma‐Aldrich) were used for immunohistochemistry. Fluorescence labeled secondary antibodies (Cy3‐conjugated goat anti‐mouse IgG, 1:200, Jackson ImmunoResearch and Alexa488‐conjugated goat anti‐rabbit IgG, 1:200, Molecular Probes, Life technologies) were used for fluorescence immunohistochemistry.
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5

Histological Analysis of Demyelination and Inflammation

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Mice were euthanized under deep anesthesia (ketamine 180 mg/kg; xylazine 16 mg/kg) by intracardiac perfusion with phosphate-buffered saline (PBS) followed by perfusion with 4% (w/v) paraformaldehyde (PFA) solved in PBS. Brain and spinal cord were removed and fixed in 4% PFA overnight. Prior to paraffin embedding, the spinal cord was cut into seven to ten transverse segments (3 mm thick) and coronal brain cuts were made. Sections (3 μm) were stained by HE (hematoxylin and eosin) and LFB-PAS (luxol fast blue including periodic acid-Schiff). Immunohistochemistry was performed using a biotin-streptavidin peroxidase technique (Dako) and an automated immunostainer (AutostainerLink 48, Dako). Sections were pretreated with citrate buffer (pH 6) in a steamer for immunohistochemistry for Mac3 (clone M3/84, #550292, 1:200 also known as CD107b or LAMP-2; BD Pharmingen). Quantification of demyelination and Mac3 infiltration was performed as described previously67 (link),68 (link).
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6

Cuprizone-Induced Demyelination and Axonal Damage

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After 6 weeks of cuprizone diet, mice were perfused with 4% paraformaldehyde. Brains were postfixed and embedded in paraffin. To determine demyelination, histologic evaluation was performed on sections stained with Luxol fast blue–periodic acid–Schiff (LFB-PAS). Immunohistochemistry was performed with primary antibodies against activated microglia (Mac-3, 1:200, clone M3/84; BD Pharmingen, San Jose, CA), oligodendrocytes (p25, 1:500, clone EPR3316; Abcam, Cambridge, UK),14 (link) and acutely damaged axons (amyloid precursor protein [APP], 1:2,000, clone 22C11; Millipore, Billerica, MA).
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