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Li 190sa quantum sensor

Manufactured by LI COR
Sourced in United States

The LI-190SA quantum sensor is a device designed to measure photosynthetically active radiation (PAR) in the spectral range of 400 to 700 nanometers. It provides a quantitative measurement of the light intensity that is available for photosynthesis.

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20 protocols using li 190sa quantum sensor

1

Cyanobacterial Growth and nZVI Exposure

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F. diplosiphon strains, B481-WT
obtained from the
UTEX algal repository (Austin, TX, USA) and B481-SD (overexpressed
strain with the sterol desaturase gene; accession: MH329183), were
used in this study. The strains were grown in liquid BG-11 medium
containing 20 mM HEPES (hereafter termed as BG-11/HEPES) to an exponential
growth phase (∼optical density 750 nm of 0.8). Cultures were
grown in vented 40 mL tissue culture flasks with continuous shaking
at 70 rpm and 28 °C in an Innova 44R incubator shaker (Eppendorf,
Hamburg, Germany). The spectrum of photosynthetic light in the shaker
had peak wavelengths at 437 and 600–650 nm with an intensity
adjusted to 30 μmol m–2 s–1 using the model LI-190SA quantum sensor (Li-Cor, Lincoln, NE, USA).
Nanofer 25s zero-valent iron nanoparticles (nZVIs) coated with polyacrylic
acid were obtained from Nano iron company (Rajhrad, Czech Republic)
and adjusted to final concentrations of 1.6, 3.2, 6.4, 12.8, 25.6,
51.2, and 102.4 mg L–1.
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2

Glucose-tolerant Synechocystis sp. cultivation

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A glucose-tolerant strain of Synechocystis sp. PCC 6803 (here after referred to as GT) was obtained from Prof. Masahiko Ikeuchi of the University of Tokyo. Synechocystis sp. PCC 6803 was routinely cultured in BG11 medium, which contained 1.5 g L−1 NaNO3, 0.04 g L−1 K2HPO4, 0.075 g L−1 MgSO4 · 7H2O, 36 mg L−1 CaCl2 · 2H2O, 6 mg L−1 citric acid, 6 mg L−1 ferric ammonium citrate, 1 mg L−1 EDTA (disodium salt), 20 mg L−1 NaCO3, 2.86 mg L−1 H3BO3, 1.81 mg L−1 MnCl2 · 4H2O, 0.222 mg L−1 ZnSO4 · 7H2O, 0.39 mg L−1 NaMoO4 · 2H2O, 0.079 mg L−1 CuSO4 · 5H2O, and 49.4 μg L−1 Co(NO3)2 · 6H2O (Rippka [1988 (link)]), under continuous illumination at 50 or 200 μmol photons m−2 s−1 using white fluorescence bulbs (Life Look HGX and NHG; NEC, Tokyo, Japan) at 28 ± 2°C under atmospheric air conditions. For CO2 enriched cultivation, cells were cultivated at 50 μmol photons m−2 s−1 and 1 or 2% CO2 was supplied with a flow rate at 80 mL min−1. Light intensity was measured in the middle of the culture using an LI-250A light meter (LI-COR, Lincoln, NE) equipped with an LI-190SA quantum sensor (LI-COR). Escherichia coli strain DH5α was used to propagate pBluescriptSK- and the apcE inactivation plasmids.
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3

Cultivation of Chlorella sorokiniana IPPAS C-1

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The axenic strain of Chlorella sorokiniana IPPAS C-1 was obtained from the collection of microalgae and cyanobacteria IPPAS (K.A. Timiryazev Institute of Plant Physiology, RAS, Moscow, Russia). The axenic culture was maintained on slants of Tamiya agarized medium [23 (link),24 (link)] in glass tubes at 22 °C under continuous illumination with cool white luminescent lamps of 30 μmol photons m−2 s−1. For the experiments, cells of C. sorokiniana were grown for 10–14 days in 300 mL Erlenmeyer flasks with 100 mL of ½ Tamiya modified medium [24 (link)] on an orbital shaker at room temperature under average illumination of 50 μmol photons m−2 s−1 from warm white light emitting diodes (LEDs). ½ Tamiya modified medium composition, g L−1: NaNO3—2.1; MgSO4·7H2O—1.25; KH2PO4—0.625; FeSO4·7H2O—0.009; EDTA—0.037; trace element solution (TES) 1 mL L−1; TES composition, g L−1: H3BO3—2.86; MnCl2·4H2O—1.81; ZnSO4·7H2O—0.222, MoO3·2H2O—0.018, NH4VO3—0.023.
All measurements of the irradiation level in the working volume of the PBRs and on the surface of the LED modules were recorded with a quantum meter LI-189 equipped with LI-190SA quantum sensor (LI-COR, Lincoln, NE, USA) in μmol photons m−2 s−1. Spectral composition of the light from LED was measured by LI-180 Spectrometer (LI-COR, Lincoln, NE, USA). Results of measurements were used to calculate the average irradiance on surfaces of PBRs.
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4

Etiolated Arabidopsis Proteome Analysis

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In this study, A. thaliana Columbia (Col-0) seedlings and transgenic Arabidopsis expressing phot1–GFP in a phot1–5 background17 (link) were
used. For etiolated seedlings, seeds were surface-sterilized and sown
on MS plates (half-strength MS medium,18 0.8% agar, 43.8 mM sucrose, pH 5.7), cold-treated (2 days at 4 °C)
in the dark, exposed to white light of medium intensity (100 μmol
photons m–2 s–1) for 6 h, and
then incubated in the dark growth room for 4 days at 22 °C. Blue
light irradiation was performed in a growth chamber (E-30 LED, Percival
Scientific, Perry, IA, USA) with far-red, red, and blue (468 nm) light-emitting
diode sources. The fluence rate was measured using a LI-250A light
meter with a LI-190SA quantum sensor (LI-COR, Lincon, NE, USA). Etiolated
seedlings were irradiated for up to 60 min with continuous blue light
(20 μmol m–2) or left in darkness as controls.
The whole seedlings, including the cotyledons, hypocotyls, and roots,
were collected and frozen immediately in liquid nitrogen until protein
extraction and proteomic analyses were performed (Figure 1).
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5

Maize Seed Germination and Growth Conditions

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The experiments were conducted at the University “Mediterranea” of Reggio Calabria, Italy. Maize seeds (Zea mays L.) (genotype KXB7554, provided by KWS Italia) were surface-sterilized with 20% NaClO for 20 min, rinsed and then soaked in aerated deionized water at room temperature for 36h. Afterwards, five seeds were sown in each of sixteen sterilized pots (16-cm diameter × 12 cm height), which were filled with a sand:soil mixture (70:30 v/v). The soil physicochemical values were reported in Gelsomino et al. [63 (link)]. Then, the pots were randomly placed in the growth chamber at 25 °C, 70% relative humidity and 350 μmol m−2 s−1 of the photosynthetic photons flux density at plants’ height (LI-190SA quantum sensor, Li-Cor, Lincoln, NE, USA) with a 14-h photoperiod. The planted pots received, for two weeks, 200 mL of tap water every four days, necessary to compensate the water losses by evapotranspiration, as suggested by the preliminary trials. After twelve days from seeding, five seedlings were thinned to one for each pot.
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6

Photosynthetic Cyanobacteria Nanoparticle Effects

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F. diplosiphon strains (SF33 and B481) were grown in 25 vented tissue culture flasks
containing BG-11 media, under white light with continuous shaking
at 70 rpm and 28 °C. Light intensity was adjusted to 30 μmol
m–2 s–1 using the model LI-190SA
quantum sensor (Li-Cor, Lincoln, NE). Two types of zero-valent iron
nanoparticles Nanofer 25 and Nanofer 25s (Nano iron company, Rajhrad,
Czech Republic) were tested in this study. Both Nanofers were of an
average size of 50 nm, with surface area of 20–25 m2 g–1 and a high content of iron; however, Nanofer
25s contained an extra biodegradable organic surface.
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7

Cultivation of F. diplosiphon Strains

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F. diplosiphon strains, B481-WT obtained from the UTEX algae repository (Austin, TX, United States), and B481-SD (overexpressed strain with the sterol desaturase gene; accession MH329183) were used in this study. Cultures were grown in liquid BG-11/HEPES medium under wide-spectrum red light (650 nm) with continuous shaking at 170 rpm at 28°C in an Innova 44R shaker (Eppendorf, Hamburg, Germany) for 6 days. Light fluence rate was adjusted to 30 μmol m–2 s –1 using the model LI-190SA quantum sensor (Li-Cor, United States). These conditions were kept constant during the study.
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8

Engineered Halotolerant Cyanobacteria Strains

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Strains HSF33-1 and HSF33-2 engineered by overexpression of hlyB and mdh halotolerant genes [21 (link)] in short filamentous F. diplosiphon wild type strain Fd33 [25 ] were used in this study. Cultures were grown in liquid BG-11 medium [26 ] with 20 mM HEPES (hereafter referred as BG-11/HEPES) supplemented with 35 g L−1 NaCl at 170 rpm and 28 °C under continuous white light adjusted to 30 μmol m−2 s−1 (model LI-190SA quantum Sensor, Li-Cor, USA). Non-transformed Fd33 grown in BG11/HEPES without NaCl under similar conditions served as control.
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9

Cultivation of Axenic Chlorella sorokiniana

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The axenic strain of Chlorella sorokiniana IPPAS C-1 was obtained from the collection of microalgae and cyanobacteria IPPAS (K.A. Timiryazev Institute of Plant Physiology, RAS, Moscow, Russia). The axenic culture was maintained on slants of a Tamiya-agarized medium [16 (link)] in glass tubes at 22 °C under continuous illumination with cool white luminescent lamps of 30 μmol photons m−2 s−1. For the experiments, cells of C. sorokiniana were grown for 10–14 days in 300 mL Erlenmeyer flasks with 100 mL of ½ Tamiya-modified medium on an orbital shaker at room temperature under an average illumination of 50 μmol photons m−2 s−1 from warm white light-emitting diodes (LEDs). The ½ Tamiya-modified medium composition, g L−1: NaNO3—2.1; MgSO4 × 7H2O—1.25; KH2PO4—0.625; FeSO4 × 7H2O—0.009; EDTA—0.037; trace element solution (TES) 1 mL L−1; TES composition, g L−1: H3BO3—2.86; MnCl2 × 4H2O—1.81; ZnSO4·7H2O—0.222, MoO3 × 2H2O—0.018, NH4VO3—0.023. All measurements of the irradiation level in the working volume of PBRs and on the surface of the LED modules were recorded with a quantum meter LI-189 with a LI-190SA quantum sensor (LI-COR, Lincoln, NE, USA) and expressed in μmol photons m−2 s−1.
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10

Wheat Growth Cycle Cultivation Protocol

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The temperature and light-duration setpoints outside the labelbox for the day/night cycle were realised over an external control unit of the climate chamber, in which the labelboxes were located throughout the cultivation period. These setpoint values are shown in Table 4. The light intensity remained constant during the whole cultivation period. The light intensity at simulated day conditions was estimated with the Li-COR sensor (LI-190SA Quantum Sensor, Li-COR, Germany) and was measured on top of the rock wool immediately after placing the pots with seedlings into the labelbox to be 206 µmol/(m2·s) in the 13C-labelbox and 220 µmol/(m2·s) in 15N-labelbox respectively.

Light and temperature intervals in the climate chamber during the cultivation process

Cultivation daysLight cycle day [h]/night [h]Temperature day [°C]/night [°C]Growth stage (Zadoks scale [48 (link)])
0–2812/1212/10Z1 and Z2
28–3112/1214/12Z2 and Z3
31–3814/1016/14
38–8614/1018/16Z3, Z4 and Z6

Zadoks scale: Z1– seedling development, Z2–tillering, Z3–stem elongation, Z4–booting and Z6–anthesis

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