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16 protocols using il 27

1

Intravitreal IL-27 Treatment in rd10 Mice

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All experiments involving mice were approved by the Animal Care and Use Committee at the University of Miami and were carried out in accordance with the ARVO statement for the Use of Animals in Ophthalmic and Vision research. The retinal degeneration 10 (rd10) mouse model was purchased from Jackson Laboratory and housed with a 12-h light–dark cycle, free access to food and water, and all cages were maintained at similar distances from the overhead lights. Experimental and control treatments were from the same litters.
Mice were divided randomly into experimental groups and were injected intravitreously with sterile saline (control) or IL-27 (10, 20, 40 ng/µl) (BioLegend, San Diego, CA) on post-natal day (P) 18, as follows. The mice were anesthetized using isoflurane, the corneas were anesthetized with a drop of 0.5% proparacaine hydrochloride and the mice were placed under a surgical microscope on a heated pad to maintain body temperature at 37 °C. The eyes were intravitreally injected with 1 µl of solution using a 33-gauge Hamilton needle (Hamilton Company, Reno, NV) passed through the sclera into the vitreous cavity and angled to avoid the lens. The fellow eye was uninjected. Mice with bleeding or swelling were excluded from further study. Investigators were masked to the treatment for all subsequent analyses.
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2

In Vitro NHEK Culture and Stimulation

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Normal human epidermal keratinocytes (NHEKs) were purchased from Thermo Fisher Scientific and maintained for up to 6 passages in T-75 flasks or used earlier. Cells were grown in serum-free EpiLife cell culture medium with EpiLife Defined Growth Supplement containing 0.06 mM Ca2+ (Gibco, Waltham, MA) or Keratinocyte serum-free-media (KSFM) with supplements provided by manufacturer (Gibco) and additional 0.06mM Ca2+. NHEKs were grown to approximately 75-80% confluence. For experiments, cells between passage 3-6 were plated at approximately 200,000 cells/well in 6-well plates and 75,000 cells/chamber in 2-chamber slides, respectively (LabTek, Bloomington, IN). For some experiments, IL-27 was used at a concentration of 100 ng/mL; IFN-α was used at a concentration of 50 U/mL (BioLegend). The cells were collected for quantitative RT-PCR or immunofluorescence at various time points.
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3

Cytokine-Induced Keratinocyte Response

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Medium was removed, and new medium containing cytokines was used to stimulate keratinocytes for a variety of time points. Unless stated otherwise, IL-6, IL-23, IL-27, IL-35 (all from BioLegend), and IL-12 (Tonbo) were added to 1 to 2 ml of medium at a concentration of 100 ng/ml; IFN-α (BioLegend) or IFN-γ (PeproTech) was added to 1 to 2 ml of media at a concentration of 50 U/ml. For the cytotoxicity study, cells were suspended in CellTiter 96 AQueous One Solution Reagent and then incubated at 37°C for 1 to 4 hours in a humidified, 5% CO2 atmosphere. Absorbance was read at 490 nm using a 24-well plate reader.
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4

Cytokine-Modulated Dendritic Cell Differentiation

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Enriched DCPs (106 cells per ml) were resuspended in ‘cDC1 medium’ (complete RMPI medium with 200 ng ml–1 FLT3L and 5 ng ml–1 GM–CSF) supplemented with various recombinant murine cytokines (IL-2, IL-12, IL-15, IL-18, IL-21, IL-23, IL-27 or none; all from PeproTech except for IL-18, IL-23 and IL-27, from BioLegend). Each cytokine was tested at the concentration of 2 ng ml–1, 8 ng ml–1 or 20 ng ml–1. The phenotype of DCP-derived cells was examined after 15 days of culture.
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5

Macrophage Differentiation from Healthy Donor Monocytes

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Peripheral blood mononuclear cells were obtained from healthy volunteer donors, who had all provided written informed consent for the use of their cells in accordance with the study protocols approved by the Kumamoto University Hospital Review Board (No. 1169). CD14+ monocytes were isolated using CD14‐microbeads (Miltenyi Biotec, Bergisch Gladbach, Germany). These monocytes were plated in 12‐well culture plates (2 × 105 cells/well, UpCELL; CellSeed, Tokyo, Japan) and were cultured in 2% human serum, 1 ng/mL granulocyte macrophage‐colony stimulating factor (GM‐CSF; Wako), and 50 ng/mL macrophage‐colony stimulating factor (M‐CSF; Wako) for 7 days to induce differentiated macrophages. In some experiments, the Stat3 inhibitor WP1066 dissolved in DMSO was added at a final concentration of 20 μM. IL‐27 (heterodimer of p28 subunit and EBI3) was obtained from BioLegend (San Diego, CA, USA).
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6

Isolation and Culture of Human Skin T Cells

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Human skin specimens were collected from healthy patients undergoing plastic surgery at Duke University Medical Center and used anonymously. All human samples for this study were obtained according to the protocols approved by the Institutional Review Board at Duke University. Samples of normal human skin obtained were cultured in 24-well plates. The human skin samples were incubated in skin explant media modified from Clark et al. (32 (link)) (DMEM; 10% FBS; 0.1 mM non- essential amino acids (Thermo Fisher Scientific, Waltham, MA); 1 mM sodium pyruvate; 2 mM L-Glutamine; 1% Pen/Strep (Thermo Fisher Scientific); IL-2 (5 unit/ml, PromoCell, Heidelberg, Germany); and IL-15 (7.5 ng/ml, Tonbo Biosciences, San Diego, CA). For other experiments, cells were then cultured in skin explant media without IL-2 and IL-15 for 24 hours before being collected. Cells that migrated into the culture media were harvested and utilized for further FACS sorting. FACS-sorted T cells were treated with recombinant 2 nM IL-15 or 3.1 nM IL-27 (BioLegend, San Diego, CA) or vehicle control for 24 hours and then collected for flow analysis.
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7

Multiplex Cytokine Profiling by Flow

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Plasma cytokine concentrations were quantified by flow cytometry using the LegendplexTM multiplex bead assay that quantifies 13 different cytokines including TNF-α, IL-1β, IFN-γ, IL-6, IL-17A, IL-23, MCP-1, IL-12p70, IL-10, IL-27, IFN-β, and GM-CSF (BioLegend, Inc., San Diego, CA).
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8

Cytokine Quantification by ELISA

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IL-12p70 (Invitrogen; Waltham, MA), IFN-γ (Invitrogen), and IL-27 (Biolegend, San Diego, CA) concentrations in culture supernatants were measured by ELISA according to manufacturer's protocol. Protein standards were assayed in parallel.
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9

RNA-Seq and RT-qPCR Analysis of IFN and Cytokine Responses

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Total RNA was extracted from FBS-MDMs stimulated or not with 25 ng/ml IFN-β, IFN-γ, IFN-λ1, or IL-27 (BioLegend) for 18 h, as reported in section 2.2. Then, 300 ng of RNA was used to construct cDNA libraries for each experimental group using the commercial RevertAid Minus First Strand cDNA Synthesis Kit (Thermo Scientific), following the manufacturer´s protocol. RT-qPCR was used to validate the expression of 14 key DEGs obtained by RNA-Seq using a set of specific primers (Supplementary Table 1). PCR amplifications were performed using the Maxima SyBR Green system (Thermo Fisher Scientific). The Bio-Rad CFX manager was used to obtain the cycle thresholds (Ct) determined for each sample using a regression fit in the linear phase of the PCR amplification curve. The relative expression of each target gene was normalized to that of the unstimulated control and housekeeping gene GAPDH (ΔΔCt) and was reported as the Log2FC (Supplementary Table 2).
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10

Cytokine-induced IL-10 Secretion

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Lin cells (1 × 105 cells per well) sorted by using a lineage cell depletion kit (Miltenyi Biotec) were incubated in 96-well plates for 12 h in the presence of the indicated cytokines or IL-27 (1, 10 and 100 ng/ml; Biolegend). IL-10 levels were quantified using an IL-10 mouse uncoated ELISA kit (Thermo Fisher, Waltham, MA) according to the manufacturer’s instructions.
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