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Horseradish peroxidase hrp conjugated goat anti rabbit secondary antibody

Manufactured by Thermo Fisher Scientific
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Horseradish peroxidase (HRP)-conjugated goat anti-rabbit secondary antibody is a laboratory reagent used in immunoassay techniques. It consists of a goat-derived antibody that specifically binds to rabbit primary antibodies, with an HRP enzyme attached. HRP can catalyze a colorimetric reaction, enabling detection and quantification of target analytes.

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9 protocols using horseradish peroxidase hrp conjugated goat anti rabbit secondary antibody

1

SARS-CoV-2 RBD Protein Expression Analysis

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5 × 104 (link) HuH7 cell/well were seeded in 12-well plates and incubated overnight at 37°C. On the following day, cells were pre-incubated for 2 h with adenovirus 5 (Ad5) at an MOI of 20 PFU/cell, and infected with an MOI of 5 × 105 of AC1 or AC3. Cells were harvested 72 h later and lysed with NuPAGE LDS Sample Buffer (4×) (Thermo Fisher Scientific, catalog no. NP0007) at 99°C for 5 min. Proteins were separated by electrophoresis in NuPAGE 4%–12% polyacrylamide gels (Thermo Fisher Scientific, catalog no. NP0321PK2) and then transferred to polyvinylidene fluoride (PVDF) membranes. The membranes were probed with an anti-SARS-CoV-2 RBD rabbit polyclonal antibody (Sino Biological, 40592-T62) followed by a goat anti-rabbit horseradish peroxidase (HRP)-conjugated secondary antibody (Thermo Fisher Scientific, catalog no. A16110, RRID: AB_2534782). Membranes were developed by chemiluminescence using the Immobilon Western Chemiluminescent HRP Substrate (Millipore, catalog no. WBKLS0500) and recorded using ChemiDoc MP Imaging System (Bio-Rad). An anti-GAPDH antibody (Cell Signaling Technology, catalog no. 2118, RRID: AB_561053) was used as loading control.
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2

Western Blot Analysis of Cellulosome Proteins

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Cellulosome proteins isolated from P. finnis cultures as described in reference 10 (link) were separated by SDS-PAGE and subsequently blotted onto a polyvinylidene difluoride (PVDF) membrane using a Bio-Rad TransBlot Turbo transfer system (Bio-Rad Laboratories, Hercules, CA). The membrane was then blocked with Tris-buffered saline plus 0.1% Tween 20 (TBS-T) supplemented with 5% milk powder for 1 h at room temperature. After being washed with TBS-T three times, the membrane was incubated with primary antibody for 1 h at 4°C. To perform the antigen blocking experiment, the membrane, containing identical protein samples, was split in two. Primary antibody (1 μg/ml) in TBS-T was used to label the control half, while 1 μg/ml primary antibody preincubated with 5 μg/ml immunizing peptide (sequence in Table S1) for 1 h prior to labeling was used to label the other half. Both halves were subsequently labeled with goat anti-rabbit horseradish peroxidase (HRP)-conjugated secondary antibody (Thermo Fisher Scientific number 31460). Blots were then developed with enhanced chemiluminescence (ECL) blotting substrate (Thermo Fisher Scientific number 32209) and imaged using a ChemiDoc imaging system (Bio-Rad Laboratories, Hercules, CA).
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3

SARS-CoV-2 Spike Protein Expression Analysis

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HEK293T cells were transiently transfected in 6-well plates with 1.6 µg of pcDNA3.1, pcDNA3.1 S.dTM.PP or pcDNA3.1 S.dTM.PP-CD40L using Lipofectamine™ 3000 Transfection Reagent (ThermoFisher, Ottawa, ON) according to the manufacturer’s instructions and incubated for 48 hours at 37°C, 5% CO2. The cells were washed with phosphate-buffered saline (PBS) and then lysed with radioimmunoprecipitation assay buffer (ThermoFisher, Ottawa, ON). Lysates were electrophoresed on a 4-15% TGX stain-free SDS-PAGE gel (Bio-Rad, Saint-Laurent, QC) and subsequently transferred to a polyvinylidene difluoride membrane. Membranes were blocked for 1h at room temperature with tris-buffered saline (TBS) containing 0.5% Tween 20 (Sigma-Aldrich, St. Louis, MO) (V/V) (TBS-T) and 5% (W/V) non-fat milk powder then incubated overnight at 4°C in blocking buffer containing either polyclonal rabbit anti-SARS-CoV-2 Spike antibody (1:3000 dilution) (Sino Biological) or polyclonal rabbit anti-β-actin antibody (1:1000 dilution) (Cell Signaling). Membranes were then incubated for 1 hour at room temperature with goat anti-rabbit horseradish peroxidase (HRP)-conjugated secondary antibody (1:75, 000 dilution) (ThermoFisher, Ottawa, ON) in blocking buffer and developed using SuperSignal™ West Femto Maximum Sensitivity Substrate (ThermoFisher, Ottawa, ON) and a ChemiDoc MP imaging system (Bio-Rad, Saint-Laurent, QC).
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4

Protein Expression Analysis in Ventricle Tissue

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Part of the ventricle was homogenized in lysis buffer and protein levels were assessed using a Bicinchoninic acid (BCA) protein assay kit (Thermo Fisher Scientific Inc. United States). Protein expression was estimated as previously described (Ahmed et al., 2014) using troponin I primary antibody (Thermofisher scientific, United States, Cat.# MA1-20112), troponin T primary antibody (Thermofisher scientific, United States, Cat.# MA1-24611), forkhead/winged helix transcription factor P3 (FoxP3) primary antibody (Thermofisher scientific, United States, Cat.# PA5-23169), retinoic-acid-related orphan receptor (ROR)-γt primary antibody (Thermofisher scientific, United States, Cat.# PA5-23148) and horseradish peroxidase (HRP)-conjugated goat anti-rabbit secondary antibody (Thermofisher scientific, United States, Cat.# 31460). The amount of protein was quantified by densitometric analysis of the autoradiograms using a scanning laser densitometer (Biomed Instrument Inc. United States). Results were normalized to β-actin and expressed as fold change to the normal group.
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5

Protein Extraction and Western Blot Analysis of M. avium

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M. avium subsp. hominissuis isolates were cultured for 2 weeks in 7H9 broth. Once turbid, the cultures were centrifuged at 5,000 × g for 10 min, supernatant was removed, and pellets were stored at –80°C. Extraction of M. avium subsp. hominissuis total proteins was performed using B-PER (Thermo Fisher Scientific, Waltham, MA) supplemented with DNase I and lysozyme (Thermo Fisher Scientific). Twenty micrograms of M. avium subsp. hominissuis total proteins and Mycobacterium tuberculosis strain H37Rv culture filtrate proteins (BEI Resources NR-14825) was separated by SDS-PAGE on a 4 to 12% Bis-Tris–morpholineethanesulfonic acid (MES) gel (Thermo Fisher Scientific) and transferred onto a polyvinylidene difluoride (PVDF) membrane (iBlot, Invitrogen). Membranes were blocked in 5% nonfat milk-PBS with 0.25% Tween 20 (PBST) overnight at 4°C. Polyclonal anti-LAM primary antibody (BEI Resources NR-13821) was diluted 1:1,000 in 5% nonfat milk in PBST and used with 1:1,000 horseradish peroxidase (HRP)-conjugated goat anti-rabbit secondary antibody (Thermo Fisher Scientific). NR-14825 and 13821 reagents were obtained through BEI Resources, NIAID, and the NIH. Blots were visualized using SuperSignal West Femto maximum sensitivity substrate (Thermo Fisher Scientific) on the iBright CL1000 imager (Invitrogen, Carlsbad, CA).
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6

Quantification of Capsular Polysaccharide in Streptococcus pneumoniae

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Capsular polysaccharide (CPS) was quantified by immunoblotting, as described [32 (link)]. An isogenic capsular variant of TIGR4 (T4R) in which the cps locus is replaced with the Janus cassette resulting in an unencapsulated phenotype [33 ] was used as a control. Briefly, bacterial strains were cultured in THY supplemented with 10% fetal bovine serum to an OD600 nm of 0.2, plated on BAP for CFU enumeration and 1 mL bacteria was pelleted and stored at −20 °C until further use. The CFUs for all strains were ~ 9.0 × 107/mL. CPS was extracted in a lysis buffer (4% deoxycholate, 50 μg/mL DNAseI and 50 μg/mL RNAse) at 37 °C for 10 min and centrifuged at 18,000× g for 10 min. Four threefold serial dilutions of the supernatant in phosphate-buffered saline (PBS) were spotted in duplicate (2 μL) on 0.2-μm-pore-size nitrocellulose membrane (Thermo Fisher Scientific, Waltham, MA, USA) with suction and air dried at 60 °C for 15 min. The membranes were blocked and incubated with rabbit anti-serotype 4 serum (Cedarlane, Burlington, NC, USA) at 1:1000 and a horseradish peroxidase (HRP) conjugated goat anti-rabbit secondary antibody (Thermo Fisher Scientific, Waltham, MA, USA) at 1:10,000. Membranes were developed with enhanced chemiluminiscence (ECL) detection (Thermo Fisher Scientific, Waltham, MA, USA) and scanned using a ChemiDoc XRS+ with Image Lab software (Bio-Rad, Hercules, CA, USA).
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7

Inflammatory Pathway Modulation via LPS and PGZ

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Lipopolysaccharide (LPS) was obtained from Sigma Aldrich (China). PGZ was purchased from SelleckChem (China). The assays for the detection of tumor necrosis factor-α (TNF-α), interleukin (IL)-1β, IL-6, and IL-10 were purchased from Beyotime Biotech (China). The synthetic short interfering RNA (siRNA) targeting PGC-1α (siPGC-1α) and its corresponding negative control (NC) were purchased from GenePharma (China). The antibodies against PPARγ, nuclear respiratory factor 1 (NRF1), NRF2, mitochondrial transcription factor A (mtTFA), glyceraldehyde 3-phosphate dehydrogenase (GAPDH), and horseradish peroxidase (HRP)-conjugated goat anti-rabbit secondary antibody were purchased from ThermoFisher Scientific (USA).
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8

Ebolavirus Protein Expression and Viral-like Particle Assay

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HEK293T cells seeded in 6-well plates (1 × 106 cells per well) were transfected with pCAGGS-NP (120 ng), -VP35 (120 ng), -VP30 (80 ng), -L (1,000 ng) together with pCAGGS-Tim1 (250 ng). The next day, 2 mL of 3-fold diluted trVLPs (P0) were infected into cells with increasing concentrations of antiviral compounds. On day 1 p.i., the cell lysates were harvested using the M-PER buffer (Thermo Scientific). Twenty micrograms of total protein per well were loaded on the 10% or 12% SDS-PAGE and electrophoretically transferred to a polyvinylidene fluoride membrane (Millipore). Viral proteins were detected using primary antibodies specific for VP40 (Cat. no. 40446-T48; Sino Biological) or NP (Cat. no. 40443-T62; Sino Biological), followed by a horseradish peroxidase (HRP)-conjugated goat anti-rabbit secondary antibody (Thermo Scientific). The cellular β-actin protein, a loading control, was detected with an anti-β-actin-specific primary antibody (Cat. No. A1987; Sigma) and the HRP-conjugated goat anti-mouse secondary antibody (Thermo Scientific).
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9

Quantification of Helminth-Specific Antigens

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Adult crude worm extracts and Hc-ESPs were quantified and diluted to 1 µg in 100 µl in ELISA coating buffer (sodium bicarbonate buffer, pH 9.0) and then loaded onto 96-well plates for overnight incubation at 4 °C. The plates were blocked with 0.05% Tween-20 and 1× PBS (PBS-Tween) containing 5% bovine serum albumin (BSA) and then incubated with polyclonal antibodies against rHc-CBP-1 or rHc-CBP-2 (1:200) in 1× PBS containing 5% BSA. After washing, the wells were incubated with horseradish peroxidase (HRP) conjugated goat anti-rabbit secondary antibody (1:1000) (Thermo Fisher Scientific, Carlsbad, CA) for 1 h and then washed with PBS-Tween-20. Substrate (ABTS; 2,2’-azino-bis (3-ethylbenzothiazoline-6-sulfonic acid) was added, and the reaction was stopped using 1% sodium dodecyl sulfate (SDS). Plates were read at 410 nm using a SpectraMax spectrophotometer (Molecular Devices, San Jose, CA). All samples were assayed in triplicate.
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