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Mnase reaction buffer

Manufactured by New England Biolabs

The MNase reaction buffer is a solution designed to facilitate the enzymatic activity of micrococcal nuclease (MNase). MNase is a commonly used enzyme that cleaves DNA between nucleosomes, allowing the study of chromatin structure and organization. The buffer provides the necessary chemical environment for optimal MNase function.

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2 protocols using mnase reaction buffer

1

Optimized MNase Digestion of Testis

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Frozen testis cryosections were thawed on a slide drier at 42 °C. Antigen retrieval was performed in boiling citrate buffer (pH 6.0) for 1 min, following which slides were washed twice in PBS for 5 min each. Next, testes sections were treated with 50 µl aliquots of MNase prepared at 2, 20, and 200 Kunitz units in MNase reaction buffer (New England BioLabs; M0247S) and incubated for 15 min at 37 °C. Controls (no MNase) were included and consisted of testis sections incubated with reaction buffer alone. MNase activity was stopped by adding 1/10th volume of 100 µM EDTA. Testis sections were washed in PBS before proceeding to immunofluorescence. MNase digestion was assessed by staining DNA with DAPI.
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2

Micrococcal Nuclease Digestion of NETs

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PMA-induced NETs were partially digested with 10 U/mL of Micrococcal nuclease (MNase; New England Biolabs [NEB]) in the presence of MNase reaction buffer (NEB) for 20 minutes at 37°C. The reaction was stopped by adding EDTA (MilliporeSigma) to a final concentration of 15 mM. NET protein concentration was determined using Bicinchoninic Acid Kit (Pierce) according to the manufacturer’s instructions.
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