Data analysis was performed with the National Center for Biotechnology Information (NCBI) nr database using the MASCOT search program (Matrix Science, Boston, MA, USA). The following parameters were allowed: taxonomy restrictions to other firmicutes, 120 ppm mass tolerance in MS, one missed cleavage, oxidation (M) as a variable modification and carbamidomethyl (C) as a fixed modification. The confidence in the peptide mass fingerprinting (PMF) matches (p < 0.05) was based on the MOWSE score and confirmed by the accurate overlapping of the matched peptides with the major peaks of the mass spectrum. Only the best matches with high confidence levels were chosen when the software gave more than one eligible result.
Biflex 4 maldi tof ms
The Biflex IV MALDI-TOF MS is a matrix-assisted laser desorption/ionization time-of-flight mass spectrometer. It is designed to perform high-performance mass analysis of a wide range of biomolecules, including proteins, peptides, and small molecules.
4 protocols using biflex 4 maldi tof ms
MALDI-TOF-MS Protein Identification Protocol
Data analysis was performed with the National Center for Biotechnology Information (NCBI) nr database using the MASCOT search program (Matrix Science, Boston, MA, USA). The following parameters were allowed: taxonomy restrictions to other firmicutes, 120 ppm mass tolerance in MS, one missed cleavage, oxidation (M) as a variable modification and carbamidomethyl (C) as a fixed modification. The confidence in the peptide mass fingerprinting (PMF) matches (p < 0.05) was based on the MOWSE score and confirmed by the accurate overlapping of the matched peptides with the major peaks of the mass spectrum. Only the best matches with high confidence levels were chosen when the software gave more than one eligible result.
Synthesis of Cystine Dimethacrylate Crosslinker
Multimodal Analytical Techniques for Biomolecular Characterization
MALDI-TOF Identification of Bacterial Isolates
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