The largest database of trusted experimental protocols

Dextranase

Manufactured by Merck Group
Sourced in Germany, United States, Denmark

Dextranase is a laboratory enzyme used to break down dextran, a complex polysaccharide. It catalyzes the hydrolysis of α-1,6-glucosidic linkages in dextran, converting it into smaller carbohydrate fragments.

Automatically generated - may contain errors

5 protocols using dextranase

1

Quantifying Soluble Dextran in W. cibaria Fermentation

Check if the same lab product or an alternative is used in the 5 most similar protocols
The content of soluble dextran produced during fermentation by W. cibaria P9 was determined by an enzyme-assisted method using a mixture of dextranase (Sigma-Aldrich, Darmstadt, Germany) and α-glucosidase (Megazyme, Bray, Ireland) according to the method reported by Katina et al. [37 (link)]. dextranase from Chaetomium erraticum and α-glucosidase from Aspergillus niger were purchased from Sigma-Aldrich (Germany). About 100 mg of freeze-dried dough was placed in 10 mL centrifuge tubes with 3 mL of water/ethanol (50:50 v/v) solution at 100 °C for 5 min. Another 3 mL of aqueous ethanol solution was added; then, the mixture was centrifuged at 10,000× g for 10 min. A further sample cleaning was made by re-suspending and centrifuging the pellet in 5 mL aqueous–ethanol solution. The pellet was re-suspended in 4.5 mL of sodium citrate buffer 0.05 M (pH 5.5) and kept at 100 °C for 5 min, vigorously vortexing after 2 min. The solutions cooled before the addition of a mixture of dextranase (100 nkat/mL) and α-glucosidase (10 nkat/mL), reaching the final volume of 5 mL with a hydrolysis temperature of 30 °C for 48 h. The reaction was stopped by keeping the samples in a boiling water bath for 10 min, after which the glucose formed was quantified using a K-GLUC glucose kit (Megazyme, Bray, Ireland).
+ Open protocol
+ Expand
2

Multispecies Cariogenic Biofilm Inhibition

Check if the same lab product or an alternative is used in the 5 most similar protocols
Streptococcus mutans UA159 serotype c (ATCC 700610), Streptococcus gordonii DL-1 and Actinomyces naeslundii ATCC 12104 were used in present study. The strains tested in this research were selected because S. mutans is a well-established virulent cariogenic bacteria [40 (link)]. S. gordonii is an early colonizer and considered an accessory pathogen (that could enhance virulence of periodontopathogens) [41 (link)]. A. naeslundii is also detected during the early stages of biofilm formation and may be associated with development of dental root caries [42 (link)]. All these strains were grown in ultra-filtered (10 kDa molecular-weight cut-off membrane; Prep/Scale, Millipore, MA) buffered tryptone-yeast extract broth (UFTYE; 2.5% tryptone and 1.5% yeast extract, pH 7.0) with 1% glucose to mid-exponential phase (37°C, 5% CO2) prior to use. The EPS-degrading enzymes Dextranase and mutanase are capable of hydrolyzing α-1,6 glucosidic linkages and α-1,3 glucosidic linkages present in the EPS glucans derived from S. mutans [43 (link)]. Dextranase produced from Penicillium sp. was commercially purchased from Sigma (St. Louis, MO) and mutanase produced from Trichoderma harzianum was kindly provided by Dr. William H. Bowen (Center for Oral Biology, University of Rochester Medical Center).
+ Open protocol
+ Expand
3

Synthesis and Characterization of MTDZ Prodrugs

Check if the same lab product or an alternative is used in the 5 most similar protocols
Dextran (MW 70,000), dextranase (Penicillium sp.), esterase, 2,4-dinitrosalicylicacid (DNS), succinic anhydride, carbonyldiimidazole (CDI), and MTDZ were obtained from Sigma-Aldrich Chemical Co. (St Louis, MO, USA). Dimethyl sulfoxide (DMSO)-d6 was obtained from Cambridge Isotope Laboratories (Andover, MA, USA). All reagents and solvents for high-performance liquid chromatography (HPLC) were obtained from Merck (Darmstadt, Germany). All other chemicals used were reagent grade, commercially available products. Infrared (IR) spectra were recorded on a Fourier transform-infrared (FT-IR) spectrophotometer (Varian, Palo Alto, CA, USA). 1H-nuclear magnetic resonance (NMR) spectra were obtained using a Varian AS 500 spectrometer, and the chemical shifts were recorded in parts per million (ppm) downfield from tetramethylsilane. Small molecular colon-specific prodrugs of MTDZ, MTDZ sulfate, and NMG were synthesized as described in previous studies.8 (link),9 (link) Structures of the prodrugs are shown in Figure S1.
+ Open protocol
+ Expand
4

In Vitro Growth of Ovarian Tissues

Check if the same lab product or an alternative is used in the 5 most similar protocols
Immature ovaries at 14 dpp were subjected to the 3-D ovarian tissue culture previously described [53 (link)]. At least five different ovaries were used for each experiment. One ovary was cut into eight pieces with a 30G needle under a stereomicroscope (Olympus, Center Valley, PA, USA), and a single tissue piece was placed on top of each dextran drop on the floating membrane (one piece per drop, four drops per well). The tissue pieces from the same ovary were evenly divided into different culture conditions. The tissues were cultured in dextran-TG hydrogels at different concentrations (Experiment 1) for 7 days at 37 °C, 5% CO2 in air. The tissues were also cultured in 2.25 mmol/L dextran hydrogels under four different conditions (A−R−, A+R−, A−R+, and A+R+) for 4 and 7 days (Experiment 2). Half of the IVG medium was replaced every other day. After culturing, the gel drops were treated for 15 min with dextranase (TRUEENZ, Sigma-Aldrich) to recover the tissues individually.
+ Open protocol
+ Expand
5

Rheological and Dextran Analysis of Fermented BSG

Check if the same lab product or an alternative is used in the 5 most similar protocols
Viscosity of the fermented BSG was measured at constant shear rate of 100/s at different time points during the fermentation using rotational rheometer (Rheolab QC, Anton Paar, Germany) as explained by Xu et al. [23 (link)] with some modification. Approximately 35 g of sample were placed in C-CC27 measuring cup for 5 min and viscosity values were measured at 22 °C.
Dextran was analysed at selected time points (T0, T6, T10, T16 and T24) by an enzyme-assisted method as previously described by Katina et al. (2009) using a mixture of two enzymes, Dextranase (Sigma-Aldrich, Denmark) and α-glucosidase (Megazyme, Ireland). Glucose (Merck, Germany) was used as standard and 2-deoxy-D-galactose (Sigma-Aldrich, UK) was used as the internal standard for quantification.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!