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Anti cdk2

Manufactured by Santa Cruz Biotechnology
Sourced in United States

Anti-CDK2 is a laboratory reagent that binds and inhibits the activity of the Cyclin-Dependent Kinase 2 (CDK2) protein. CDK2 is a key regulator of cell cycle progression and plays a critical role in the control of cell division. Anti-CDK2 can be used to study the function of CDK2 in various cellular processes and signaling pathways.

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55 protocols using anti cdk2

1

Western Blot Analysis of Signaling Proteins

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Western blot analysis was performed as described previously26 (link). The blots were then incubated with one of the following antibodies: anti-STK38 (2F6, Abnova, Jhouzih St., Taipei), anti-phospho-NDR1/2 (Thr 444/442, Signalway Antibody, College Park, MD), anti-CDK2 (Santa Cruz Biotechnology, Santa Cruz, CA), anti-MEKK2 (Epitomics, Burlingame, CA), anti-phospho-MKK4 (Cell Signaling Technology, Beverly, MA), anti-V5 (Nacalai Tesque, Kyoto, Japan), anti-FLAG (M2, Sigma), anti-GST (Santa Cruz Biotechnology), or anti-β-actin (Sigma). The captured images were analysed with Image J image-processing software and quantified by measuring the density of each protein band.
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2

Mitochondrial Dynamics and Cell Cycle Analysis

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MitoTracker Green FM, DAPI, and Alexa Fluor 488– phalloidin were purchased from Life Technologies (Carlsbad, CA). Digitonin and etoposide were from Wako Pure Chemical Industries (Osaka, Japan). Mdivi-1 was from Enzo Life Sciences (Farmingdale, NY). Z-VAD-FMK was purchased from Peptide Institute (Osaka, Japan). NU6140 and BI2536 were from Santa Cruz Biotechnology (Santa Cruz, CA). The following antibodies were used for Western blotting and immunostaining: anti-Drp1, anti–cytochrome c (BD Biosciences, Billerica, MA), anti–γ-tubulin (Sigma-Aldrich, St. Louis, MO), anti-Smac (ProSci, Poway, CA), anti–phospho-Plk1 (Thr-210), anti-Plk1 (Abcam, Cambridge, United Kingdom), anti–phospho-CDK2 (Thr-160), anti-γ-H2AX, anti–phospho-histone H3 (Ser-10; Cell Signaling Technology, Beverly, MA), Alexa Fluor 488 anti-mouse immunoglobulin G (Life Technologies), anti–voltage-dependent anion-selective channel protein 1 (VDAC1), anti–glyceraldehyde 3-phosphate dehydrogenase (GAPDH), anti-CDK2, anti–cyclin A, anti–cyclin E, anti–cyclin B1, anti-actin, and horseradish peroxidase (HRP)-conjugated secondary antibodies (Santa Cruz Biotechnology). The Western Lightning Plus-ECL chemiluminescence detection kit was purchased from PerkinElmer-Cetus (Boston, MA).
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3

Quantifying CDK2 Kinase Activity in PDAC Cells

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To analyze the CDK2 kinase activity, primary PDAC cells that were exposed to DMSO or palbociclib (200 nM) for 48 hour were lysed using the kinase lysis buffer (50 mM HEPES-KOH pH 7.5, 150 mM NaCl, 1 mM EDTA, 1mM DTT, 0.1% Tween-20) in the presence of 1X Halt protease inhibitor (Thermo Fisher) and 1 mM PMSF (Sigma). Active CDK2 complex was immunoprecipitated by incubating 300 μg of the lysate with 5 μg of anti-CDK2 (Santa Cruz Biotechnology; SC-6248) overnight at 4°C. Normal mouse IgG1 (Cell Signaling Technology, 5415) was used as a control. Protein G agarose-beads were added to each IP samples and incubated up to 4 hour at 4°C. Protein immunocomplexes were washed 3 times with the kinase lysis buffer and 2 times with kinase reaction buffer (40 mM Tris-HCl pH 8, 20 mM MgCl2, 0.1 mg/mL BSA, 50 μM DTT). Kinase reactions were carried out in 100 μl of kinase buffer in the presence of 100 μM ATP and 0.5 μg of bacterially purified RB C-terminal as substrate25 (link) by gently shaking at room temperature up to 30 minutes. The resulting phosphorylated RB protein was detected by immunoblotting using anti-pRb (S807/S811) antibody (Cell Signaling Technology, 8516S).
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4

Antibody-based Protein Analysis Protocol

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Antibodies used in this study included: anti-PUMA (Cell Signaling Technology); anti-cleaved poly ADP-ribose polymerase (PARP; Cell Signaling Technology); anti–β-actin (Sigma); anti-ATM (Abcam); anti-p-Ser1981-ATM (Abcam); anti-cleaved Caspase 7 (Stressgen Bioreagents Corp.); anti-p-Ser15-p53 (Cell Signaling Technology); anti-p53 (Oncogene Research); anti-Cdk2 (Santa Cruz Biotechnology); anti-Ku86 (Santa Cruz Biotechnology); anti-Tubulin (Santa Cruz Biotechnology); and anti-Flag (Sigma). 5-FU and MTX were purchased from Sigma. 2-14C-5-FU was purchased from Moravek Biochemicals. Cks expressing adenoviruses were described previously (13 (link)).
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5

Immunoblotting of Glioblastoma Proteins

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Human glioblastoma cells or tumor tissues were harvested and washed with ice-cold PBS. Then, samples were suspended in SDS sample buffer, boiled for 10 min, and centrifuged at 12,000 rpm for 15 min. Thirty micrograms of protein samples were separated using 8–12% SDS-polyacrylamide gel electrophoresis (SDS-PAGE) and transferred to a PVDF membrane (Millipore Corporation). The PVDF membrane was blocked with 5% milk for 1 h and then incubated with a primary antibody at 4°C overnight. Subsequently, the PVDF membrane was probed with the secondary antibody and visualized by enhanced chemiluminescence (ECL) (Beyotime Institute of Biotechnology, Haimen, China). The primary antibodies were as follows: anti-G9a (1:500, Santa Cruz), anti-a-tubulin (1:2000, Sigma), anti-CDK1 (1:1000, Abcam Cambridge, MA, United States), anti-CDK2 (1:500, Santa Cruz), anti-Cyclin A2 (1:2000, Abcam), anti-Cyclin B1 (1:3000, Abcam), anti-MMP1 (1:1000, Abcam), anti-N-cadherin (1:5000, Abcam), anti-LC3B (1:1000, Cell Signaling Technologies, Danvers, MA, United States), anti-p62 (1:1000, Abcam), anti-c-Myc (1:1000, Abcam), and anti-H3K9me2 (1:2000, Abcam). Horseradish peroxidase-conjugated goat anti-mouse IgG (1:20,000), goat anti-rabbit IgG (1:20,000), and rabbit anti-goat IgG (1:10000) (KPL, Gaithersburg, Maryland, United States) were used as secondary antibodies.
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6

Signaling Pathways in Angiogenesis

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The following agents were obtained from commercial sources: vascular endothelial growth factor‐A 165 (Merck Millipore, Billerica, MA, USA); anti‐phospho‐VEGFR‐2 (Y951) (Abcam, Cambridge, UK); anti‐phospho‐p70S6K (T421/S424), anti‐phospho‐Akt (S473), anti‐phospho‐ERK (T202/Y204), anti‐phospho‐p38MAPK (T180/Y182), anti‐phospho‐pRb (S780) and anti‐phospho‐pRb (S807/S811) (Cell Signaling, Beverly, MA, USA); anti‐phospho‐tyrosine (BD Biosciences, Bedford, MA, USA); anti‐VEGFR‐2, anti‐vascular endothelial (VE)‐cadherin, anti‐integrin β1, anti‐ILK, anti‐p70S6K, anti‐Akt, anti‐ERK, anti‐p38MAPK, anti‐Cdk2, anti‐Cdk4, anti‐cyclin D, anti‐cyclin E, anti‐actin antibodies and mouse and rabbit IgG‐horseradish peroxidase conjugates (Santa Cruz Biotechnology, Santa Cruz, CA, USA); Alexa Fluor 488–conjugated goat anti‐mouse IgG (Life Technologies, Grand Island, NY, USA).
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7

Antibody-based Protein Analysis Protocol

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Antibodies used in this study included: anti-PUMA (Cell Signaling Technology); anti-cleaved poly ADP-ribose polymerase (PARP; Cell Signaling Technology); anti–β-actin (Sigma); anti-ATM (Abcam); anti-p-Ser1981-ATM (Abcam); anti-cleaved Caspase 7 (Stressgen Bioreagents Corp.); anti-p-Ser15-p53 (Cell Signaling Technology); anti-p53 (Oncogene Research); anti-Cdk2 (Santa Cruz Biotechnology); anti-Ku86 (Santa Cruz Biotechnology); anti-Tubulin (Santa Cruz Biotechnology); and anti-Flag (Sigma). 5-FU and MTX were purchased from Sigma. 2-14C-5-FU was purchased from Moravek Biochemicals. Cks expressing adenoviruses were described previously (13 (link)).
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8

Protein Profiling of Cells and Exosomes

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Cells and exosomes were lysed using CHAPS lysis buffer (30 mM Tris-Cl, pH 7.5; 150 mM NaCl; 1% CHAPS) mixed with 25X protease inhibitor (Roche), and sonication. Proteins were quantified by Bradford method (Bio-Rad). Electrophoresis was performed using 10% acrylamide gel, proteins were transferred to polyvinylidene difluoride (PVDF) membranes (Bio-Rad) and probed with the following antibodies: anti-TSG101 (Abcam), anti-HSC70, anti-GAPDH, anti-Calnexin, anti-C/EBPβ, anti-CDK2 (all from Santa Cruz Biotechnology), anti-FOXO-1 (Cell Signaling), and appropriate species-specific HRP-conjugated secondary antibodies (Santa Cruz), and detected using ECL reagent (Roche).
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9

Profiling Cellular Signaling Pathways

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Lysates (40 μg) of freshly isolated or cultured cells were analyzed with anti-p21 (Santa Cruz) anti-phospho ERK antibodies (Cell Signaling); anti-ERK (Cell Signaling), anti-CDK2 (Santa Cruz) and anti-β-actin (Sigma) served as loading controls. Macrophage whole cell lysates (20 μg) were probed with anti-phospho-STAT1 (Cell Signalling) and anti-iNOS (Abcam).
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10

Protein Expression Analysis in Kidney Tissues

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Kidney tissues and cells were lysed in mammalian protein extraction buffer (GE Healthcare, Milwaukee, WI, USA) containing a protease and phosphatase inhibitor cocktail (GenDEPOT Inc., Katy, TX, USA). Approximately 20–50 µg of the lysates were electrophoresed and transferred to polyvinylidene difluoride membranes (PVDF, Millipore, Billerica, MA, USA). Membranes were blocked with 3% nonfat milk and incubated with primary antibodies overnight at 4 °C. The following antibodies were used at the indicated dilutions: anti-cyclin A, anti-cyclin D1, anti-CDK2, anti-CDK4, anti-p27Kip1, anti-KLF5, anti-β-actin (1:500; Santa Cruz Biotechnology), anti-p-Erk, anti-Erk, anti-p-JNK, anti-JNK, anti-p-p38, anti-p38, and Egr1 (1:1000; Cell Signaling Technology). After washes, the membranes were incubated with secondary antibodies conjugated with horseradish peroxidase (Santa Cruz Biotechnology) for 1 h at room temperature. Immunoreactive signals were detected using an ECL detection system (Millipore).
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