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Irdye 680cw labeled secondary antibodies

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IRDye 680CW‐labeled secondary antibodies are fluorescently-labeled antibodies that can be used to detect and quantify target proteins in various applications, such as Western blotting, immunohistochemistry, and ELISA. The IRDye 680CW dye emits in the near-infrared range, providing high sensitivity and low background signal.

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4 protocols using irdye 680cw labeled secondary antibodies

1

Immunoblot Analysis of Protein Extracts

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Immunoblot analyses were performed as previously described15, 16. Briefly, proteins were extracted in enzyme immunoassay buffer containing 250 mmol/L Tris base, 750 mmol/L NaCl, 5% NP‐40, 25 mmol/L EDTA, 2.5% sodium deoxycholate, 0.5% sodium dodecyl sulfate, and an EDTA‐free protease and phosphatase inhibitors cocktail tablet (Roche Applied Science, Indianapolis, IN, USA), sonicated, centrifuged at 56,700 g for 45 min at 4°C, and supernatants used for immunoblot analysis, as previously described. Total protein concentration was determined by using BCA Protein Assay Kit (Pierce, Rockford, IL). Samples were electrophoretically separated using 10% Bis–Tris gels or 3–8% Tris–acetate gel (Bio‐Rad, Richmond, CA), according to the molecular weight of the target molecule, and then transferred onto nitrocellulose membranes (Bio‐Rad). They were blocked with Odyssey blocking buffer for 1 h; and then incubated with primary antibodies overnight at 4°C. After three washing cycles with T‐TBS, membranes were incubated with IRDye 800CW or IRDye 680CW‐labeled secondary antibodies (LI‐COR Bioscience, NE) at 22°C for 1 h. Signals were developed with Odyssey Infrared Imaging Systems (LI‐COR Bioscience). Primary antibodies used in this paper are summarized in Table 1. Actin was always used as an internal loading control.
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2

Protein Extraction and Western Blot

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Primary antibodies used in this paper are summarized in the Table. Proteins were extracted in enzyme immunoassay buffer containing 250mM Tris base, 750mM NaCl, 5% NP‐40, 25mM EDTA, 2.5% sodium deoxycholate, 0.5% sodium dodecyl sulfate, and an EDTA‐free protease and phosphatase inhibitors cocktail tablet (Roche Applied Science, Indianapolis, IN), sonicated, and centrifuged at 45,000 rpm for 45 minutes at 4°C, and supernatants were used for immunoblot analysis, as previously described [16 (link)–18 (link)]. Briefly, total protein concentration was determined by using a BCA Protein Assay Kit (Pierce, Rockford, IL), samples were electrophoretically separated according to the molecular weight of the target molecule, and then transferred onto nitrocellulose membranes (Bio‐Rad). They were blocked with Odyssey blocking buffer for 1 hour, and then incubated with primary antibodies overnight at 4°C. After 3 washing cycles with T‐TBS, membranes were incubated with IRDye 800CW‐ or IRDye 680CW‐labeled secondary antibodies (LI‐COR Bioscience, Lincoln, NE) at 22°C for 1 hour. Signals were developed with Odyssey Infrared Imaging Systems (LI‐COR Bioscience). Actin was always used as an internal loading control.
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3

Protein Extraction and Western Blot

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Primary antibodies used in this paper are summarized in the Table. Proteins were extracted in enzyme immunoassay buffer containing 250mM Tris base, 750mM NaCl, 5% NP‐40, 25mM EDTA, 2.5% sodium deoxycholate, 0.5% sodium dodecyl sulfate, and an EDTA‐free protease and phosphatase inhibitors cocktail tablet (Roche Applied Science, Indianapolis, IN), sonicated, and centrifuged at 45,000 rpm for 45 minutes at 4°C, and supernatants were used for immunoblot analysis, as previously described [16 (link)–18 (link)]. Briefly, total protein concentration was determined by using a BCA Protein Assay Kit (Pierce, Rockford, IL), samples were electrophoretically separated according to the molecular weight of the target molecule, and then transferred onto nitrocellulose membranes (Bio‐Rad). They were blocked with Odyssey blocking buffer for 1 hour, and then incubated with primary antibodies overnight at 4°C. After 3 washing cycles with T‐TBS, membranes were incubated with IRDye 800CW‐ or IRDye 680CW‐labeled secondary antibodies (LI‐COR Bioscience, Lincoln, NE) at 22°C for 1 hour. Signals were developed with Odyssey Infrared Imaging Systems (LI‐COR Bioscience). Actin was always used as an internal loading control.
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4

Immunoblot Analysis Protocol for Protein Quantification

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Immunoblot analyses were performed as previously described (Joshi et al., 2014). Briefly, proteins were extracted in enzyme immunoassay precipitation buffer containing 250 mM Tris base, 750 mM NaCl, 5% NP‐40, 25 mM EDTA, 2.5% sodium deoxycholate, 0.5% sodium dodecyl sulfate and an EDTA‐free protease and phosphatase inhibitors cocktail tablet (Roche Applied Science, Indianapolis, IN, USA), sonicated, centrifuged at 125,000 g for 45 min at 4°C, and supernatants used for immunoblot analysis. Total protein concentration was determined by using BCA Protein Assay Kit (Pierce, Rockford, IL, USA). Samples were electrophoretically separated using 10% Bis–Tris gels or 3%–8% Tris–acetate gel (Bio‐Rad, Richmond, CA, USA), according to the molecular weight of the target molecule, and then transferred onto nitrocellulose membranes (Bio‐Rad). They were blocked with Odyssey blocking buffer for 1 hr and then incubated with primary antibodies overnight at 4°C. After three washing cycles with T‐TBS, membranes were incubated with IRDye 800CW or IRDye 680CW‐labeled secondary antibodies (LI‐COR Bioscience, NE, USA) at 22°C for 1 hr. Signals were developed with Odyssey Infrared Imaging Systems (LI‐COR Bioscience). Actin and GAPDH were used as internal loading controls. Primary antibodies used in this paper are summarized in Table 2.
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