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Peroxidase conjugated secondary antibody

Manufactured by Abcam
Sourced in United States, United Kingdom, China

Peroxidase-conjugated secondary antibody is a laboratory reagent used to detect and visualize primary antibodies in various immunoassays. It consists of a secondary antibody that is chemically conjugated to the enzyme peroxidase. When the secondary antibody binds to the primary antibody of interest, the peroxidase enzyme can catalyze a colorimetric or chemiluminescent reaction, allowing for the detection and localization of the target antigen.

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44 protocols using peroxidase conjugated secondary antibody

1

Insulin Receptor β Protein Detection

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For gel electrophoresis, the protein samples were resuspended and heated for 5 min at 95°C and loaded on a 4–12% SDS-PAGE (Criterion XT Bis-Tris Gel, Biorad, France). Proteins were transferred onto a nitrocellulose membrane (Biorad, Fance) after electrophoresis. Membranes were blocked with TBS-T/5% milk and incubated overnight at 4°C with the primary antibody anti insulin receptor β (IRβ) (rabbit monoclonal, #3020, Cell Signaling, diluted 1/1000). The blot was then incubated with peroxidase conjugated secondary antibody (Abcam, diluted 1/5000). The protein signal was detected using the ECL kit (Amersham Biosciences). Proteins were analyzed using anti- Signals on autoradiographic films were quantified by scanning densitometry using ImagQuant 350 (GE Healthcare, France).
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2

Investigating UPR Signaling Pathways

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TMF was prepared as described previously (1 ). Tunicamycin (TM) was obtained from Sigma Chemicals (St. Louis, MO). Dulbecco’s modified Eagle’s minimum essential medium (DMEM), fetal bovine serum (FBS), penicillin, and streptomycin were obtained from Gibco (Life Technologies, Grand Island, NY). IRE1α, XBP1S, CHOP, JNK, p-JNK, Bcl-2, caspase-3, and GAPDH monoclonal antibodies and the peroxidase-conjugated secondary antibody were purchased from Abcam (Cambridge, UK).
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3

Quantifying PADI2 Protein Expression in Tissue Samples

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As described previously [21 ,22 (link),23 (link)], paraffin sections were deparaffinized and rehydrated [28 (link),29 (link),30 (link)]. Immunohistochemical (IHC) staining was conducted using a Super Sensitive™ Polymer-HRP IHC detection system (Biogenex, San Ramon, CA, USA). The slides were incubated with PADI2 polyclonal antibody (12110-1-AP, Proteintech, Rosemont, IL, USA) at a dilution of 1:50 at 4 °C overnight, followed by a wash, and then incubated with the peroxidase-conjugated secondary antibody (Abcam, Cambridge, UK), showing cytoplasm and nucleus staining. PADI2 was visualized using 3,3′-diaminobenzidine (DAB), and the slides were counterstained using hematoxylin. Oncological pathologists defined the protein expression scores using the multiplied values of stained intensity (0–2) and percentage of positive cells (0–100%). The PADI2 value was applied as a cutoff value to differentiate high or low expression.
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4

Western Blot Analysis of Cancer Markers

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The tumor tissues obtained from the mice that received treatment with NS, Blank NP, Sal free 2, Sal NP 2, and Sal NP 8 were selected for further study. These tissues were ground into cell suspensions. Cells were washed twice with phosphate-buffered saline (PBS) solution and lysed with RIPA Lysis Buffer (Beyotime Institute of Biotechnology, Shanghai, China) and protease inhibitor (Thermo Fisher Scientific, USA). Protein concentrations were determined using the Pierce BCA Protein Assay Kit (Thermo Fisher Scientific, USA). Equivalent amounts of total protein (60 µg) were boiled and electrophoretically separated on a 10% polyacrylamide gel at 80 volts. The proteins were transferred onto polyvinylidene difluoride membranes. The membranes were blocked for 60 min with a 5% milk solution prepared in PBS, incubated overnight at 4°C with primary antibodies (GAPDH, CD44, CD133, E-cadherin, VIM, ZEB1, and ZEB2) at a 1:500 dilution. The membranes were washed thrice for 5 min each time with Tween 20 (1:1000 dilution)-PBS and incubated for 45 min with the appropriate peroxidase-conjugated secondary antibody (Abcam, USA) (1:1000 dilution). Membranes were washed with Tween 20-PBS thrice for 10 min each time and visualized using the Odyssey two-color infrared laser imaging system (ECDOI, Greenville, USA). The signal generated by GAPDH was used as an internal control.
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5

Protein Extraction and Western Blot Analysis of Cortical Organoids

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Cortical organoids from a quarter to a half of a well were washed once with ice cold PBS (w/o Ca2+/Mg2+). Proteins were extracted using lysis buffer (20mM Tris, pH 7.4, 140mM NaCl, 10% glycerol, 2mM EDTA, 1mM EGTA, and 1% Triton X-100) supplemented with EDTA-free Complete protease inhibitor cocktail (Roche) and Phosphatase Inhibitor cocktail (Sigma Aldrich). The suspension was centrifuged at 16,000xg at 4°C for 30min, and supernatants were collected. Protein concentration was quantified by a modified Lowry assay (DC protein assay; Bio- Rad). Cell lysates were resolved by SDS-PAGE and transferred onto PVDF Immobilon-P membranes (Millipore). After blocking with 1X TBS, 0.1% Tween-20 containing 5% nonfat dry milk for 1h at room temperature, membranes were first probed with primary antibodies, and then after 1h of incubation with corresponding peroxidase-conjugated secondary antibody (Abcam). Membranes were developed using the EZ-ECL chemiluminescence detection kit (Denville Scientific). The following primary antibodies were used: anti-KCTD13 (1:500; Atlas Antibodies), anti-RhoA (1:1000; Cell Signaling), and anti-β-actin (1:5000; Sigma Aldrich) as a loading control. Quantification was performed by densitometry with ImageJ software.
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6

Western Blot Analysis of Inflammation Markers

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After being extracted with lysis buffer, equal amounts of cellular protein were resolved on 6%–12% SDS-PAGE gels and transferred to polyvinylidenedifluoride membranes. After blocking with 5% nonfat dry milk, the membranes were incubated overnight with different primary antibodies specific for HMGB1 (Abcam), RAGE (Santa Cruz), TLR4 (Abcam), p-IκBα, IκBα, p-JNK, JNK, p-ERK1/2, ERK1/2, p-P38, P38 (all from Cell Signaling Technology, Beverly, MA, USA), and β-actin (Abcam). After washing, the membranes were subsequently incubated with the appropriate peroxidase-conjugated secondary antibody (Abcam) for 1 h at room temperature. The blots were visualized using an enhanced chemiluminescence system (Amersham, Arlington Heights, IL, USA).
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7

Western Blot Analysis of CCT4 Knockdown

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Cells transfected with CCT4 shRNA and control shRNA were harvested, and the total protein was extracted using radio-immunoprecipitation assay (RIPA) buffer supplemented with fresh protease and phosphatase inhibitors. The protein concentration was determined by bicinchoninic acid (BCA) assay (Pierce; Thermo Fisher Scientific, Inc.). Equal amounts of proteins (50 μg) were loaded on 10% sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and transferred onto polyvinylidene fluoride (PVDF) membranes. The membranes were blocked with 3% bovine serum albumin (BSA) in 10 mmol/L Tris-hydrochloride (HCl) (pH 7.4, with 0.05% Tween-20) and incubated with primary antibody at 4°C for 12 hours. After washing with Tris-HCl buffer three times, the membranes were incubated with a corresponding peroxidase-conjugated secondary antibody (Abcam, Cambridge, UK). The membranes were developed using Super-Signal West Pico Chemiluminescent Substrate (Pierce; Thermo Fisher Scientific, Inc.). The densitometry of the protein bands was quantified by ImageJ software (https://imagej.nih.gov/ij/). This experiment was repeated at least three times. The information about the antibodies is listed in Table 1.
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8

Western Blot Analysis of Protein Expression

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Cells transfected with siRNA were harvested and total proteins were extracted from tumor cell lines using RIPA buffer containing fresh protease and phosphatase inhibitors. The protein concentration was determined using the BCA assay (Pierce; Thermo Fisher Scientific, Inc.). Briefly, equal amounts of proteins (50 µg) were subjected to 10% SDS-PAGE and transferred onto PVDF membranes. The membranes were blocked with 3% BSA in 10 mM Tris-HCl (pH 7.4) containing 0.05% Tween-20 and incubated with a primary antibody at 4°C for 12 h. After washing with Tris-HCl buffer for three times, the membranes were incubated with a corresponding peroxidase-conjugated secondary antibody (Abcam). Immunoreactive bands were visualized using Super-Signal West Pico Chemiluminescent Substrate (Pierce; Thermo Fisher Scientific, Inc.). The densitometry of the protein bands was quantified by ImageJ software (1.8.0; National Institutes of Health). The experiment was repeated at least three times. The details of the primary antibodies used in the experiments are documented in Table I.
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9

Immunohistochemical Analysis of Cancer Markers

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Immunohistochemistry (IHC) staining was routinely carried out using an immunohistochemistry kit (abcam, UK). The tissue sections were deparaffinized and rehydrated. The antigen was retrieved by sodium citrate buffer. Following endogenous peroxidase blocking and incubation in normal goat serum (Vector Lab, Burlingame, CA) for 20 mins, these sections were incubated with ERO1A (1:200, LSBio, USA), CEA (Use directly, zsbio, China), CA19-9 (Use directly, zsbio, China) overnight at 4°C and then with the peroxidase-conjugated secondary antibody (abcam, UK). Color development was performed with 3,3′-diaminobenzidine (DAB) and slides were counterstained with hematoxylin. Neutral resin sealing was performed. The results of immunohistochemical staining were observed under a microscope (Olympus Tokyo, Japan).
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10

Bile Protein Analysis in Choledocholithiasis and HCC

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A total of 20 μg of proteins from each patient’s bile (choledocholithiasis, n = 14; HCC, n = 12) were separated by SDS-gel electrophoresis and transferred to PVDF membranes (Millipore, USA). The membranes were then incubated overnight at 4°C with primary antibodies, including anti-PRDX2 (1:1000, Abcam, ab109367), anti-CyclinD1 (1:1000, Abcam, ab16663), anti-cMYC (1:1000, Abcam, ab32072), anti-c-Jun (1:1000, Abcam, ab40766), anti-fra1 (1:1000, Abcam, ab252421), anti-β-catenin (1:1000, Abcam, ab32572), anti-Lamin B1 (1:1000, Abcam, ab16048), anti-GAPDH (1:2000, Abcam, ab76523) and anti-β-actin (1:1000, Abcam, ab8227). Following primary antibody incubation, the membranes were washed and incubated with peroxidase-conjugated secondary antibody (1:2000, Abcam, Cambridge, UK). Subsequently, substrate development was performed using ECL chemiluminescence (Millipore, Bedford, Mass, USA).
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