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Alexa fluor 647 conjugated anti rabbit secondary antibody

Manufactured by Thermo Fisher Scientific

Alexa Fluor 647-conjugated anti-rabbit secondary antibody is a detection reagent used in fluorescence-based applications. It binds to primary antibodies raised in rabbit and is labeled with the Alexa Fluor 647 fluorescent dye, which can be detected using appropriate instrumentation.

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4 protocols using alexa fluor 647 conjugated anti rabbit secondary antibody

1

Immunofluorescent Staining of Senescent Cells

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SVF cells were fixed in 4% PFA for 15 min at room temperature. Cells were then washed with PBS prior to a 10 min incubation in permeabilization buffer (0.2% Triton X-100, 1% BSA in PBS). Next, the cells were washed with PBS and blocked for 1 h in PBS/1% BSA solution. After blocking, cells were incubated with anti-Lamin B1 primary antibody (1:100, 12987-1-AP, Proteintech, Rosemont, IL) or anti-p21 primary antibody (1:40, 14-6715-81, Thermo Fisher Scientific) in PBS/1% BSA overnight at 4 °C. The next day, cells were washed with PBS and incubated for 1 h at room temperature with Alexa Fluor 647-conjugated anti-rabbit secondary antibody (A-21244, Thermo Fisher Scientific) diluted 1:200 in PBS/1% BSA. Stained cells were then washed with PBS and analyzed by flow cytometry or ImageStreamX.
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2

Quantification of NMDA-R Expression in Macrophages

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PMs were cultured in DMEM/F12 with 10% FBS alone or in the presence of 20% L929 cell-conditioned medium or 10 nM CSF-1 for up to 5 days. PMs and BMDMs were suspended using 0.5% Trypsin (Invitrogen). Non-specific antibody binding was blocked by incubation with 2% BSA in PBS. The cells were then treated with NMDA-R NR1 subunit-specific antibody (Invitrogen, cat. PA3-102), diluted 1:100 for 40 min. After washing to remove unbound antibody, the cells were incubated with Alexa Fluor 647-conjugated anti-rabbit secondary antibody (ThermoFisher, 1:600) for 30 min. Unbound antibody was removed by washing. All incubations were performed with live cells at 4°C so that antibody-binding was limited to cell surface epitopes. At least 10,000 cells per sample were analyzed using a BD FACS Canto II (BD Biosciences). Flow histogram overlays were prepared using FlowJo software (FlowJo, LLC).
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3

Quantification of Intestinal Tuft Cells

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Small intestines were collected, formalin fixed, and paraffin embedded. Paraffin sections (5 µm) were deparaffinized in xylene and rehydrated in an ethanol gradient. Antigen retrieval was performed in 10 mM sodium citrate buffer, pH 6.0, at 95°C for 20 min. Sections were stained with rabbit polyclonal anti-DCLK1 (1:1,000; Abcam) overnight at 4°C, followed by staining with Alexa Fluor 647–conjugated anti–rabbit secondary antibody (1:4,000; Molecular Probes), and counterstaining with DAPI (1:10,000; Sigma-Aldrich). Images were acquired with the Axio Scan Z.1 Slide Scanner (ZEISS). Quantification was performed blind by counting the total number of tuft cells per crypt-villus with the Zen Blue 2 software (ZEISS).
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4

Immunophenotyping of Harvested Cells

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Harvested cells were incubated in blocking solution with primary antibodies against FAP (AbCam), CD90 (Novus Biologicals), CD133 (BD Biosciences), and CD44 (BD Biosciences) on ice. Cells were then further incubated with Alexa Fluor 488-conjugated anti-mouse secondary antibody (Molecular Probes) or Alexa Fluor 647-conjugated anti-rabbit secondary antibody (Molecular Probes) on ice and in the dark. Flow cytometry was performed using FACSVerse (BD Biosciences) immediately after washing with PBS.
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