The largest database of trusted experimental protocols

Exactive orbitrap plus spectrometer

Manufactured by Thermo Fisher Scientific

The Exactive Orbitrap plus spectrometer is a high-resolution mass spectrometer that utilizes Orbitrap technology to perform accurate mass measurements. It is capable of delivering high-resolution, accurate mass data for a wide range of analytical applications.

Automatically generated - may contain errors

10 protocols using exactive orbitrap plus spectrometer

1

Purification and Characterization of Synthetic Compounds

Check if the same lab product or an alternative is used in the 5 most similar protocols
All reagents and solvents, unless otherwise specified, were purchased from commercial sources and used without further purification. 1H NMR and 13C NMR spectra were recorded on Mercury-600 spectrometers at room temperature. Chemical shifts are referenced to the residual solvent peak and reported in ppm (δ scale), and all coupling constant (J) values are given in Hz. ESI-HRMS and ESI-LRMS data were measured on Thermo Exactive Orbitrap plus spectrometer. Flash column chromatography was performed on Flash 300 Isolera one. Analytical HPLC conditions were as follows: Agilent 1260 Infinity II variable wavelength detector; Waters XBridge C18, 4.6 mm × 150 mm, 3.5 μm particles. Phase A was water with 0.1% TFA, and phase B was MeCN. The entire eluting time was 10 min with a gradient from 10% phase B to 90% phase B in 3.5 min, followed by a 4.5 min hold at 90% phase B, and then a gradient from 90% phase B to 10% phase B in the next 2 min. The flow rate was 1 mL/min. The synthetic routes of the compounds are shown in Supplementary Fig. 8. 1H NMR, 13C NMR, HRMS and HPLC data of intermediates and final products are reported in Supplementary Figs. 9–24.
+ Open protocol
+ Expand
2

Nuclear Magnetic Resonance and Mass Spectrometry Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols

1H-NMR and 13C-NMR spectra were recorded with a Varian Mercury 400 or 500 spectrometer using tetramethylsilane as the internal standard in methanol-d4, DMSO-d6, or chloroform-d. High-resolution mass spectrometry (HRMS) data were measured on a Thermo Exactive Orbitrap Plus spectrometer. Liquid chromatography–mass spectrometry (LC-MS) was conducted on an Agilent 1100 series HPLC and an Agilent LC/MSD TOF. All of the solvents and chemicals were purchased from commercial sources: Sigma-Aldrich Chemical Co., Beijing Ou-he Reagents Co., Beijing Shiji-Aoke Biotechnology Co., and Shanghai Jingke Chemistry Technology Co. with a purity of more than 95% (LC-MS). All chemicals and solvents used were of reagent grade without further purification or drying before use. All the reactions were monitored by thin-layer chromatography (TLC) under a UV lamp at 254 nm. Column chromatography separations were performed using silica gel (200–300 mesh).
+ Open protocol
+ Expand
3

Purification and Characterization of Organic Compounds

Check if the same lab product or an alternative is used in the 5 most similar protocols
All
reagents and solvents were purchased
from commercial suppliers and used without further purification. Reactions
were monitored by thin-layer chromatography (TLC) with visualization
of components by UV light (254 nm) or exposure to I2. Flash
column chromatography was conducted on silica gel (300–400
mesh). Melting points were determined on a Yanaco MP-J3 microscope
melting point apparatus, which is uncorrected. 1H NMR and 13C NMR spectra were recorded on Varian-400 and Mercury-500/600
spectrometers in CDCl3 or dimethyl sulfoxide (DMSO)-d6. Electrospray ionization-high-resolution mass
spectrometry (ESI-HRMS) data were measured on a Thermo Exactive Orbitrap
plus spectrometer.
All target compounds were purified by chromatography
and have a purity of ≥95% as determined by high-performance
liquid chromatography (HPLC)/MS analysis conducted on a Thermo Exactive
Plus system using a reversed-phase C18 column with 5–95% CH3CN in water (0.1% HCOOH) for 5 min at a flow rate of 0.4 mL/min.
+ Open protocol
+ Expand
4

Synthesis of Fluorinated Organic Compounds

Check if the same lab product or an alternative is used in the 5 most similar protocols
All solvents and chemicals were purchased from commercial sources: Sigma-Aldrich Chemical Co., Shanghai Bepharm Science&Technology Co., Shanghai Macklin Biotechnology Co., Tianjin Heowns Biotechnology Co., and Shanghai Jingke Chemistry Technology Co. with the purity of more than 95%. Flash column chromatography was performed on a Biotage Isolera one. 1H NMR, 13C NMR, and 19F NMR were recorded on Mercury400, Bruker AVANCEΙΙΙ 400 spectrometer. Chemical shifts are referenced to the residual solvent peak and reported in ppm (δ scale) and all coupling constant (J) values are given in Hertz (Hz). The following multiplicity abbreviations are used: (s) singlet, (d) doublet, (t) triplet, (q) quartet, (m) multiplet. ESI-HRMS data were measured using a Thermo Exactive Orbitrap plus spectrometer. Purity was determined using LCMS. All of the synthesized compounds have a purity of >95%.
+ Open protocol
+ Expand
5

Synthesis and NMR Characterization of Novel Compounds

Check if the same lab product or an alternative is used in the 5 most similar protocols
The reagents and solvents were obtained from
commercial suppliers and used without further purification. 1H and 13C NMR spectra were recorded on a Varian 400 or
500 MHz NMR spectrometer with dimethyl sulfoxide (DMSO)-d6 as a solvent. Chemical shifts are referenced to the
residual solvent peak and reported in parts per million (ppm) (δ
scale), and all coupling constant (J) values are
given in hertz. Electrospray ionization-high-resolution mass spectrometry
(ESI-HRMS) data were measured on a Thermo Exactive Orbitrap plus spectrometer.
Melting points were determined on a Yanaco MP-J3 microscope melting
point apparatus. All microwave reactions were carried out in single-mode
CEM Explorer SP 48. Substrates 1, 2, and 11 were prepared according to the reported procedures.36 (link)−40 (link)
+ Open protocol
+ Expand
6

Silica Gel Purification and NMR Characterization

Check if the same lab product or an alternative is used in the 5 most similar protocols
All starting materials, reagents, and solvents were obtained from commercial sources and used without further purification. Flash column chromatography was carried out on silica gel (300 -400 mesh). 1 H and 13 C NMR spectra were generated on Varian-400 and Mercury-500/600 spectrometers in CDCl3 or dimethyl sulfoxide (DMSO)-d6. HR-MS (ESI) data were measured on Thermo Exactive Orbitrap plus spectrometer. Melting points were determined on a Yanaco MP-J3 microscope melting point apparatus.
Chemical shifts values were referenced to the residual solvent peak and reported in ppm (δ scale) and all coupling constant (J) values were given in Hz.
+ Open protocol
+ Expand
7

Synthesis and Characterization of Organic Compounds

Check if the same lab product or an alternative is used in the 5 most similar protocols
All the solvents and chemicals were obtained from commercial sources and used without further purification. TLC was performed on silica gel plates (GF254) with visualization of components by UV light (254 nm) or exposure to I2. Column chromatography was carried out on silica gel (300-400 mesh). The structural identities of the prepared compounds were confirmed by 1 H NMR and 13 C NMR spectroscopy and mass spectrometry. 1 H NMR spectra were obtained on Varian Mercury-400 at 400 MHz. 13 C NMR spectra were obtained on Varian Mercury-400 at 100 MHz. Chemical shifts (δ) values were referenced to the residual solvent peak and reported in ppm and all coupling constant (J) values were given in Hz.
CDCl3 or DMSO-d6 were used as the standard NMR solvents. The following multiplicity abbreviations are used: (s) singlet, (d) doublet, (t) triplet, (q) quartet, (m) multiplet, and (brs) broad. The chemical shifts of isomer of 13 C NMR were given in parenthesis. ESI-HRMS data were measured on Thermo Exactive Orbitrap plus spectrometer. Melting points were determined on Yanaco MP-J3 microscope melting point apparatus.
+ Open protocol
+ Expand
8

Melting Point and Spectroscopic Characterization

Check if the same lab product or an alternative is used in the 5 most similar protocols
Melting points were determined on a Kofler Thermogerate apparatus and were uncorrected. Infrared spectra were recorded on a JASCO FT/IR-400 spectrophotometer. Nuclear magnetic resonance spectra were recorded, unless otherwise specified, on a Bruker AM-400 instrument using deuterated chloroform or dimethylsulfoxide solutions containing tetramethylsilane as an internal standard. ESI/MS experiment was carried out on an UHPLC Eksigent1 coupled with MS detector ABSciex1, Triple Quad 4500 model equipment. HRMS-ESI-MS experiments were performed using a Thermo Scientific Exactive Plus Orbitrap spectrometer with a constant nebuliser temperature of 250 °C. The experiments were carried out in positive or negative ion mode, with a scan range of m/z 300.00–1510.40 and a resolution of 140,000. The samples were infused directly into the ESI source via a syringe pump at flow rates of 5 µL·min−1 through the instrument’s injection valve. Thin layer chromatography (TLC) was performed using Merck GF-254 type 60 silica gel. Column chromatography was carried out using Merck type 9385 silica gel. The purity of the compounds was determined by TLC and high-resolution mass spectrometry (HRMS) and for 4s by HLPC (Figure S8).
+ Open protocol
+ Expand
9

Synthesis and Characterization of TMAO Monomer

Check if the same lab product or an alternative is used in the 5 most similar protocols
Diethylenetriaminepentaacetic acid (800 mg) was added to 30 ml of Milli-Q water and mixed vigorously until the white powder dissolved. Then, hydrogen peroxide (50% solution, 2.87 g) was slowly added, and reaction contents were heated to 60°C. Oxygen gas was then slowly purged into solution (31 ). Dimethylaminopropylacrylamide (14.4 g) in 10 ml of Milli-Q water was added dropwise for 30 min. The reaction was carried out for 6 hours at 60°C. After completion of reaction, the reaction contents were cooled. NMR analysis of the product confirmed the formation of TMAO monomer. The pH of the final product was about 7.5, and the solid content was about 32.9%. TMAO monomer was then precipitated by an organic solvent. The final product is colorless and viscous liquid. NMR result is shown in fig. S1. 1H NMR (500 MHz, D2O): δ = 6.07 to 5.93 (m, 2H), 5.55 (d, J = 9.9 Hz, 1H), 3.12 (m, 4H), 3.01 (s, 6H), 1.90 to 1.74 (m, 2H). HRMS analysis was carried out by using a Thermo Fisher Scientific Exactive Plus Orbitrap spectrometer, and the result is shown in fig. S2. HRMS (mass/charge ratio): calculated for C8H17N2O2, 173.1284 ([M + H]+); found 173.1282.
+ Open protocol
+ Expand
10

NMR and HRMS Analysis Protocols

Check if the same lab product or an alternative is used in the 5 most similar protocols
1H and 13C NMR spectra were recorded on a Bruker Avance 500 MHz spectrometer at 300 K. Coupling constants in Hz were measured from-one dimensional spectra. HRMS-ESI analyses were carried out using a Thermo Scientific Exactive Plus Orbitrap spectrometer with a constant nebulizer temperature of 250°C. The experiment was carried out in positive ion mode at high resolution (resolving power: 140,000 (full width half-maximum peak width at m/z 300, Rfwhm). The samples were infused directly into the ESI source using a syringe pump at flow rates of 5 μL min-1. All chemicals were reagent grade and used without further purification (S1 Fig).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!