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5 protocols using ab79483

1

Protein Expression Analysis in GC Tissues

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GC tissues or cells were collected, and the total protein was extracted by radioimmunoprecipitation assay (RIPA) lysis buffer (Beyotime Biotechnology, Shanghai, China). The protein concentration was determined using a bicinchoninic acid (BCA) kit (20201ES76, Yeasen Biotechnology, Shanghai, China). Quantification was performed according to different concentrations. Following separation with the use of polyacrylamide gel electrophoresis, the protein was transferred onto a polyvinylidene fluoride membrane (IPVH85R, Millipore, Darmstadt, Germany), which was then blocked with 5% bovine serum albumin (BSA) for 1 h at room temperature. Next, the membrane was incubated with primary rabbit antibodies (Abcam, Cambridge, UK) to CXXC4 (ab105400, 1:100), ERK (ab184699, 1:10,000), phosphorylated ERK (ab79483, 1:1,000), PD-L1 (ab233482, 1:100), and GAPDH (ab128915, 1:10,000) overnight at 4°C. The following day, the membrane was cultured with horseradish peroxidase (HRP)-labeled goat anti-rabbit immunoglobulin G (IgG) (ab205718, 1:20,000, Abcam, Cambridge, UK) for 1 h at room temperature. The membrane was visualized using the developing solution. Protein quantitative analysis was conducted using ImageJ 1.48u software (National Institutes of Health) and expressed as the gray value ratio of each protein to the internal reference GAPDH.
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2

Western Blot Analysis of Neuronal Signaling

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Primary cortical neurons or brain tissues were lysed with RIPA buffer containing phosphatase and protease inhibitors. After measurement with BCA kits, the proteins were denatured by boiling for 10 min and then loaded on 8-12% SDS‒PAGE gels, followed by transfer from the gels to activated PVDF membranes. After blocking with 5% nonfat dry milk, the membranes were incubated with the following primary antibodies: anti-PI3K (ab154598, 1:2000), anti-p-Akt (ab38449, 1:1000), anti-Akt (ab283852, 1:2500), anti-GRP78 (ab21685, 1:3000), anti-p-PERK (ab192591, 1:1000), anti-PERK (ab79483, 1:2500), and anti-p-IRE1α (ab124945, 1:2500) were obtained from Abcam, USA and anti-IRE1α (#3294, 1:2500), anti-ATF6 (#65880, 1:2000), anti-CHOP (#5554, 1:2000), anti-Caspase12 (#35965, 1:2500), anti-Caspase3 (#9579, 1:1000), anti-Bcl-2 (#3869S, 1:2000) and anti-Bax (#5023, 1:2500) were supplied by Cell Signaling Technology, U.S.A. Anti-β-actin antibody (GB15004, 1:3000) was purchased from Servicebio Technology (China). After incubation with the primary antibodies overnight, the membranes were washed three times with TBST and incubated with secondary anti-rabbit HRP antibody (GB1213, 1:5000, Servicebio Technology, China). Enhanced chemiluminescence was used to visualize the membranes, and the analysis was performed using ImageJ software.
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3

Western Blot Analysis of Signaling Proteins

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Cultured cells were collected and lysed with RIPA buffer containing the protease inhibitors on ice for 30 min. Protein was separated by SDS-PAGE, transferred onto a nitrocellulose membrane (Pall Co., USA) and probed with primary antibodies, including GAPDH as the internal standard, and then with horseradish peroxidase-labeled secondary antibodies. The blots were incubated with antibodies against β-catenin (1:5000, rabbit monoclonal, ab32572, Abcam, Inc.), p-ERK (1:500, rabbit polyclonal, ab79483, Abcam, Inc.), ERK (1:1000, rabbit monoclonal, ab32537, Abcam, Inc.), p-AKT (1:5000, rabbit monoclonal, ab81283, Abcam, Inc.), AKT (1:5000, rabbit monoclonal, ab179463, Abcam, Inc.). GAPDH (1:5000, rabbit monoclonal, ab181602, Abcam, Inc.) was used as a loading control. Protein levels were detected by a chemiluminescence approach according to the protocol (ECL, Forevergen, Guangzhou, China). Images were analyzed using ImageJ software (NIH, USA). The proteins were represented by using GAPDH loading as normalization.
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4

Endoplasmic Reticulum Stress Pathway

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Antibodies against phosphorylated (p)-protein kinase R-like ER kinase (PERK; ab192591), PERK (ab79483), inositol-requiring kinase 1α (IRE1α; ab37073), p-IRE1α (ab48187), activating transcription factor 6α (ATF6α), p-50ATF6α (ab37149), glucose-regulated protein 78 (GRP78; ab21685), CCAAT/enhancer binding protein homologous protein (CHOP; ab11419), p-c-Jun N-terminal kinase (JNK; ab124956), JNK (ab179461) and caspase-3 (ab13847) were purchased from Abcam (Cambridge, UK). N-acetyl L-cysteine (NAC), 4-phenylbutyric acid (4-PBA) and thap-sigargin (Thap) were also purchased from Abcam. The Annexin V-fluorescein isothiocyanate (FITC) apoptosis detection kit was purchased from Roche Diagnostics (Indianapolis, IN, USA). Cell Counting kit-8 (CCK-8) and 2′,7′-dichlorofluorescein diacetate (DCFH-DA) were purchased from Beyotime Institute of Biotechnology (Shanghai, China). SW (osmolality, 1,300 mmol/l; pH 8.2; relative density 1.05; salt content, 34.421%; NaCl, 26.518 g/l; MgSO4, 3.305 g/l; MgCl2, 2.447 g/l; CaCl2, 1.141 g/l; KCl, 0.725 g/l; NaHCO3, 0.202 g/l; and NaBr, 0.083 g/l) was prepared based on the overall composition of the East China Sea, which was provided by the Chinese Ocean Bureau (Beijing, China).
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5

Western Blot and Co-IP Analysis of UPR Markers

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Western blot and Co-IP were performed as described previously (L. Wang et al., 2018) (link). The primary antibodies for IRE1α (ab37073, 1:1000), p-IRE1α (ab48187, 1:1000), PERK (ab79483, 1:1000), eIf2α (ab264254, 1:1000), ATF4 (ab23760, 1:1000), p38 (ab170099, 1:1000), p-p38 (ab178867, 1:1000) and p-Akt (ab38449, 1:800) were purchased from Abcam. Antibodies against ATF6α (p50) (#65880, 1:1000), p-PERK (#3179, 1:1000) and p-eIf2α (#3398, 1:1000) were purchased from Cell Signaling. Antibodies about CREB3L2 (14514-1-AP, 1:800), Akt (10176-2-AP, 1:2000), GRP78 (11587-1-AP, 1:2000), GFP tag (50430-2-AP, 1:1500), CHOP(15204-1-AP, 1:500), SREBP1 (14088-1-AP, 1:1000) were purchased from Proteintech. β-Actin (AF5003, 1:1000) was purchased from Beyotime. was purchased from Santa Cruz. Samples were subjected to standard SDS-PAGE, and the resulting bands were transferred onto polyvinylidene difluoride membrane for visualizing specific proteins. The ECL Plus detection system (Thermo Scientific, USA) was used for detection.
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