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Prestained page ruler

Manufactured by Thermo Fisher Scientific
Sourced in Spain

The Prestained Page Ruler is a lab equipment product designed to aid in the measurement and analysis of gel electrophoresis samples. It provides a visual reference scale with pre-stained markers to facilitate accurate size determination of proteins or nucleic acids separated on a gel.

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2 protocols using prestained page ruler

1

Extracellular Protein Extraction and Separation

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Extracellular proteins were obtained from bacterial supernatants following the protocol described by Sánchez et al. [17 (link)]. Briefly, trichloroacetic acid (TCA) was added to the spent supernatants at a final concentration of 6% (w/v) and incubated ON at 4°C. Samples were then centrifuged and washed twice with ice-cold acetone (10,000 ×g, 4°C, 10 min). Pellets were dried for one hour at 37°C in a heat block, and the precipitate corresponding to 50 mL of culture was resuspended in 200 μL of Laemmli buffer 5X [18 (link)] with the help of an ultrasound bath (15 min) (Ultrasons-H, JP Selecta, Spain). Samples were finally centrifuged (16,000 ×g, 21°C, 5 min) to precipitate nonsolubilized proteins and volumes of 15 μL were loaded in polyacrylamide gels (12.5%) under denaturing conditions (SDS-PAGE). Prestained Page Ruler (Thermo Fisher Scientific, Madrid, Spain) was used as molecular mass marker. Extracellular proteins were separated according to Laemmli [18 (link)], in an electrophoresis buffer containing SDS (1 g/L), TRIS (3 g/L), and glycine (15 g/L) (Sigma-Aldrich) at pH = 8.7, under a constant current of 40 mA. To visualize proteins, gels were stained with colloidal Coomassie blue (GelCode Blue Safe Protein Stain, Thermo Fisher Scientific), according to the manufacturer's instructions.
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2

SDS-PAGE Analysis of Cysteine Mutants

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To prepare the sample, 30 µg of each recombinant cysteine mutant (EA1N703C/N340C, EA1N703C/D343, and EA1N703C/K372C) were boiled with and without 1 mM of 2-mercaptoetanol. Samples were analyzed by SDS-PAGE, electro-transferred onto a 0.2 μm Nitrocellulose membrane and blocked with 5% (w/v) skimmed milk for 1 h. The membrane was incubated for 1 h at room temperature with Mouse anti Histidine Tag:Alkaline phosphatase-conjugated (BioRad MCA1396A). After washing three times in TBS-Tween buffer (Tris-HCl pH 8 10 mM; NaCl 150 mM; Tween20 0.05% (vol/vol) for 5 min each wash. The membrane was revealed by incubating for 10 min with NBT/BCIP (Roche) and imaged using the GelDoc imager (Biorad). Prestained PageRuler (Thermo Fisher Scientific) was used as a molecular ladder. The uncropped blot is shown in Supplementary Fig. 20.
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