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17 protocols using α tubulin antibody

1

Fibrosis Pathway Protein Analysis

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CCL24 and TGF-β were acquired in Sigma Chemical Co. Primary antibodies against CCR3, CCL24, Col1a1, Col3a1, CCN2, a-SMA, TGF-β, and CCN2(CTGF) were collected from Cell Signaling Technology (CST). We obtained α-tubulin antibodies from Abcam. We purchased goat IgG-HRP antibodies (anti-rabbit and anti-mouse) from CST. The blocking antibody of CCL24 was purchased from PEPROTECH.
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2

Extracellular Vesicle Protein Analysis

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EV pellets were resuspended in 50 µl of lysis buffer (0.15 M NaCl, 5 mM EDTA, pH 8, 1% Triton X-100, and 10 mM Tris-HCl, pH 7.4), and protein contents were quantified using a BCA protein assay kit according to the manufacturer’s protocol (Thermo Fisher Scientific). Protein extracts from EV pellets and cell lysates were prepared with Laemmli buffer in nonreductive conditions, heated at 95°C for 5 min, and separated on 15% polyacrylamide gels before transfer to a nitrocellulose membrane (Hybond ECL plus; Thermo Fisher Scientific). Membranes were blocked in 5% nonfat milk and incubated with the anti-CD9 (H-110; Santa Cruz Biotechnology, Inc.), -CD63 (H-193; Santa Cruz Biotechnology, Inc.), -TSG101 (C-2; Santa Cruz Biotechnology, Inc.), LAMP1 (1D4B; Abcam), and α-tubulin antibodies (4074; Abcam) followed by the horseradish peroxidase–coupled secondary antibody and then were subjected to enhanced chemiluminescence.
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3

Drosophila Cell Culture and Reagents

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S2R+ cells were grown in Schneider's medium (Sigma) supplemented with 10% fetal bovine serum (FBS; Gibco) and 1× penicillin/streptomycin (Gibco) unless stated otherwise, at 25°C. Hoechst 33258 and 33342, bovine insulin, tunicamycin (Tm), thymidine, nocodazole, rapamycin and sodium oleate (Na-C18 : 1), and anti-bromouridine monoclonal antibodies were purchased from Sigma. Bodipy 493/510, ER Tracker Green, Alexa-488 and Alexa-647 immunoconjugates were purchased from Molecular Probes (Invitrogen). Phospho-histone H3 pSer10 and dAkt pSer505 antibody was purchased from Cell Signaling Technologies. RNAse A was purchased from Ambion. Antibodies against total Drosophila Akt and dSREBP have been developed by the Leevers and Rawson laboratories, respectively [3 (link),17 (link),29 (link)]. Calreticulin antibody and α-tubulin antibody were purchased from Abcam and SeroTec, respectively.
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4

Immunocytochemistry of 3D4/21 Cells

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After the corresponding experimental treatment, 3D4/21 cells were fixed with 4% paraformaldehyde at room temperature for 30 min, treated with 1% Triton X-100 for 10 min, and blocked with bovine serum albumin (Beyotime Institute of Biotechnology, Shanghai, China) at room temperature for 1 h. The samples were then incubated overnight with primary antibody (α-Tubulin antibody, abcam Co., Ltd., Cambridge, MA, USA) at 4 °C. The cells were gently washed with PBST and incubated for 1 h, in the dark, with fluorescently labeled secondary antibodies (abcam Co., Ltd., Cambridge, MA, USA). After gently washing the cells 3 times with PBST, DAPI was added to counterstain cell nuclei. Samples were observed and photographed under a fluorescence microscope (Leica Microsystems, Wetzlar, Germany).
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5

Cytoskeletal Organization in Trophoblast Cells

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TSCs were grown on coverslips in 6-well plates at a density of 0.05 million for undifferentiated control cells and 0.5 million for differentiation into TGCs or for treatment with Aurora A inhibitor. Cells on coverslips were washed with PBS and fixed with 4% formaldehyde for 15 min at room temperature. The cells were then washed again with PBS, followed by permeabilization and blocking with 0.1% Triton X solution prepared in 2% BSA for 20 min at room temperature. After permeabilization, cells were washed with PBS and incubated with phalloidin Texas Red (Invitrogen) or phalloidin Alexa Fluor 488 (Thermofisher Scientific) or α-tubulin antibody (Abcam, 1:500 dilution) for an hour. For tubulin staining, cells were washed and incubated for another hour with AlexaFluor 488-labeled secondary antibody. The coverslips for both phalloidin and tubulin staining were washed five times with PBS, stained with DAPI (in the penultimate wash), and mounted on the slides using Fluoromount™. Images were taken using a confocal microscope (Nikon Model C2+).
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6

Quantitative Analysis of Viral Protein Expression

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CEK cells were infected with identical doses (200 μL of PBS containing 108 copies) of rYN or rYN-Δ5a. At 12, 24, 36, or 48 hpi, the cells were washed with cold PBS and harvested in 80 μL of 2× lysis buffer. After being incubated on ice for 30 min, the cells were sonicated for 1 min and then boiled. Equal protein amounts were separated by SDS-PAGE, and proteins were detected via Western blotting using specific antibodies against IBV N (Hytest, Finland), β-actin (Merck Millipore, Burlington, MA, USA), α-tubulin antibody (Abcam, Cambridge, UK), and histone H3 antibody (Abcam). Images were taken with the ChemiDoc imaging system (Bio-Rad, Hercules, CA, USA). Protein signal intensities were normalized and quantified using ImageJ software (NIH, Bethesda, MD, USA).
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7

Quantitative Analysis of Viral Protein Expression

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CEK cells were infected with identical doses (200 μL of PBS containing 108 copies) of rYN or rYN-Δ5a. At 12, 24, 36, or 48 hpi, the cells were washed with cold PBS and harvested in 80 μL of 2× lysis buffer. After being incubated on ice for 30 min, the cells were sonicated for 1 min and then boiled. Equal protein amounts were separated by SDS-PAGE, and proteins were detected via Western blotting using specific antibodies against IBV N (Hytest, Finland), β-actin (Merck Millipore, Burlington, MA, USA), α-tubulin antibody (Abcam, Cambridge, UK), and histone H3 antibody (Abcam). Images were taken with the ChemiDoc imaging system (Bio-Rad, Hercules, CA, USA). Protein signal intensities were normalized and quantified using ImageJ software (NIH, Bethesda, MD, USA).
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8

Immunohistochemistry and HPLC Analysis of Dopaminergic Markers

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MPTP-HCl was purchased from Sigma Aldrich (Milwaukee, WI, USA). Polyclonal rabbit anti-TH (cat#AB152) was purchased from EMD Millipore (Billerica, MA, USA). Monoclonal rat anti-DAT (cat# AB5990) and α-tubulin antibody (cat#AB80799) were purchased from Abcam (Cambridge, UK) and polyclonal rabbit anti-VMAT2 was a gift from Dr. Gary Miller at Emory University. Alexafluor secondary antibodies (anti-rabbit and anti-mouse) were purchased from Thermo-Fisher Scientific (Waltham, MA). Horseradish peroxidase conjugated secondary antibodies were purchased from Bio-Rad (Hercules CA). Biotinylated secondary antibody and 3,3-diaminobenzidine–peroxidase (DAB) including nickel enhancer for immunohistochemistry were purchased from Vector laboratories (PK-6100, SK-4100, Burlingame, CA). Monoamine standards for high performance liquid chromatography- electrochemical detection (HPLC-ECD) analysis for dopamine (DA), 3,4-dihydroxyphenylacetic acid (DOPAC) and homovanillic acid (HVA) were purchased from Sigma-Aldrich (Milwaukee, WI, USA). All other chemicals were purchased from Sigma Aldrich or Thermo-Fisher unless specifically noted.
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9

PD-L1 Expression Measurement in Tumor Tissue

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Tumor tissue was homogenized in cold lysis buffer containing 1 mM phenylmethane sulfonyl fluoride and lysed for at least 30 min on ice. Protein concentrations were measured using the Blue Fast Staining Solution (Beyotime, Shanghai). Equal amounts (40 µg) of protein were separated via 10% SDS-PAGE and transferred to PVDF membranes (Millipore). Membranes were blocked with TBS/T containing 5% skim milk for 1 h and incubated overnight at 4°C with PD-L1 antibody and α-tubulin antibody (Abcam, UK). The membranes were then incubated with secondary antibodies (Beyotime Institute of Biotechnology, Jiangsu, China) at room temperature for 2 h. After several washes with TBS/T, the blots were detected using Immobilon™ Western Chemiluminescent HRP Substrate (Millipore) and quantified using a Tanon-4500 Gel Imaging System (Tanon Science & Technology Co., Ltd.).
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10

Immunofluorescence Staining of α-Tubulin

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Immunofluorescence was performed as described [28 (link)]. The primary antibody was anti-α-Tubulin (Cell Signaling; mouse monoclonal; 1:2000) and the secondary antibody was Alexa488-conjugated anti-mouse IgG (Molecular Probes; 1:500). The slides were mounted in VectaShield fluorescence mounting medium containing 4, 6-diamidino-2-phenylindole (Vector Laboratories). Images were analyzed using a Zeiss confocal laser scanning microscope. Alternatively, cells were stained with α-tubulin antibody (1:50, mouse monoclonal; Abcam) followed by a CY5-conjugated secondary anti-mouse antibody (1:200; Abcam). The cover slips were mounted with Invitrogen Anti Fade Mounting Medium containing DAPI and imaged using a Zeiss AxioImager.Z1 microscope at 63x magnification.
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