Fourteen genes were chosen for the validation of RNA-seq using qRT-PCR. Primer Premier 5.0 software was used to design the primers, which are listed in
Table S2. A total of 1 μg RNA per sample was reverse transcribed using a
PrimeScript™ reagent Kit with gDNA Eraser (TaKaRa, Beijing, China) in 20 μL of reaction mixture. The qRT-PCR was performed on a LightCycler
® 96 instrument (Roche, Basel, Switzerland), using
THUNDERBIRD SYBR qPCR Mix (TOYOBO, Shanghai, China) with the following reactions: 95°C 2 min; 95°C 30s, 60°C 10s, and 68°C 10s for 40 cycles. The PCR products were quantified by 2
−△△CT method (Livak and Schmittgen, 2001 (
link)) with normalization to the expression level of
SmGAPDH (
EGP1067575). Significant differences between groups were assessed by Student’s
t-test (p < 0.05) using
SPSS 16.0 Statistics (SPSS Inc., Chicago, IL, USA).
Luo L., Molthoff J., Li Q., Liu Y., Luo S., Li N., Xuan S., Wang Y., Shen S., Bovy A.G., Zhao J, & Chen X. (2023). Identification of candidate genes associated with less-photosensitive anthocyanin phenotype using an EMS mutant (pind) in eggplant (Solanum melongena L.). Frontiers in Plant Science, 14, 1282661.