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Skyscan 1272 system

Manufactured by Bruker
Sourced in Belgium

The Skyscan 1272 system is a high-resolution micro-computed tomography (micro-CT) scanner designed for non-destructive 3D imaging of a variety of samples. The system utilizes X-ray technology to generate detailed 3D models of the internal structure of the sample.

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21 protocols using skyscan 1272 system

1

Micro-CT Analysis of Bone Mineralization

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Micro-CT analysis of mineralized bone mass in tibiae was performed using the SkyScan 1272 system (Bruker) at a pixel size of 5 µm with 50 kV tube voltage, 200 µA current and 0.5 mm aluminium filter39 (link),41 (link). Projection data were reconstructed using the NRecon software (Bruker) and trabecular and cortical volumes of interest were selected manually. For trabecular bone, the region between 0.5 and 3.5 mm distal from the growth plate was selected, and for cortical bone, the region between 2 and 2.5 mm was selected. 3D morphometric parameters were calculated using the CT Analyzer software (Bruker) at a threshold index of 100 to 255 (global Otsu thresholding). Data were presented according to the guidelines of the American Society for Bone and Mineral Research42 (link). 3D image rendering was performed using the 3D visualization software (Bruker).
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2

Quantifying Vibrissae Sheath Calcification

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Contralateral biopsies from vibrissae-containing muzzle skin were fixed in formalin and embedded in paraffin before imaging. X-ray computed microtomography (µCT) was performed using a Skyscan 1272 system (Bruker, Kontich, Belgium) at the Lariboisière Hospital imaging platform (Paris, France). A 6 µm resolution scale was obtained. Shadow images were obtained using an X-ray energy of 65 kV and 150 mA without filter exposition. The angular step between image acquisitions was 0.5°, and each image was averaged after 2 frames. Data were reconstructed using Nrecon software (Bruker, Kontich, Belgium) and exported into a 16-bit Tag Image File Format stack of virtual slices. The Mimics Innovation suite 20.0 (Materialise, Leuven, Belgium) was used for three-dimensional modeling and subsequent quantification analysis of vibrissae sheath calcification volume, normalized to total muzzle skin volume.
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3

Quantitative Microarchitecture Analysis of Tibial Bone

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Microarchitecture of the cortical and cancellous compartments of the tibia was quantified by μCT using the SkyScan 1272 system (Bruker). For cancellous bone morphology, the proximal tibia was scanned at 3.5 μm resolution. A 400 μm region of interest was 3D reconstructed with a 450 μm offset from the proximal growth plate. This region was auto-contoured using SkyScan CT Analyzer (CTAn) Software (Bruker) to select for the cancellous region. Cancellous parameters such as Bone Volume (BV, mm3), Tissue Volume (TV, mm3), percent Bone Volume (BV/TV, %), Trabecular Spacing (Tb.Sp, mm), Trabecular Thickness (Tb.Th, mm), and Trabecular Number (Tb.N, 1/mm) were quantified following standard μCT guidelines (Bouxsein et al., 2010 (link)). For the analysis of cortical bone microstructure, the tibia was scanned at 12 μm resolution. A 300 μm region that was 200 μm proximal to the tibio-fibular junction (TFJ) was auto-contoured to analyze cortical bone parameters such as Marrow Area (Ma.Ar, mm2), Cortical Area (Ct.Ar, mm2), Endocortical Perimeter (Ec.Pm, mm), Periosteal Perimeter (Ps.Pm, mm), and Cortical Thickness (Ct.Th, mm).
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4

Microstructure Analysis of Samples

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Sample scans were performed on a SkyScan 1272 system (Bruker microCT, Kontich, Belgium) operated at 45 keV source voltage and 201 μA current with the following parameters: image pixel resolution of 25.0 μm, rotations by 0.3° steps over a total of 180°, averaging 4 frames. A stack of about 628 projection raw images (1008 × 1008 pixels) was obtained. The scan duration for each sample was 45 min.
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5

Bone Microstructure Analysis Protocol

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Tibiae were fixed in 10% formalin and scanned using a SkyScan 1272 system (Bruker, Kontich, Belgium), as previously described [28 (link)]. All measurements followed standard guidelines [29 (link)]. Next, 3 µm decalcified wax tissue sections were assessed for osteoclasts and osteoblasts as previously described [30 (link)].
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6

Microcomputed Tomography Analysis of Femoral Bone

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Microcomputed tomography (Micro-CT Skyscan 1272 system; Bruker, Belgium) with an isotropic voxel size of 8 μm was used to quantify the bone parameters of the femurs, as previously described [23 ]. The scanning voltage was 60 kV, the current was 165 μA, and the resolution was 8 μm per pixel. A bone defect area with a diameter of 3.5 mm was selected for quantitative analysis [24 (link)]. Trabecular bones were thresholded at 90–255 (8 bit grayscale bitmap). Reconstruction was performed with Nrecon (Ver. 1.6.10). Three-dimensional (3D) images were obtained from contoured 2D images with methods based on distance transformation of the grayscale original images (CTvox, Ver. 3.0.0). The bone parameters, including bone mineral density (BMD, g/cm3), trabecular bone volume fraction (BV/TV, %), trabecular number (Tb.N, 1/mm), and trabecular separation (Tb.Sp, mm), were calculated with CT Analyzer (Version 1.15.4.0, Belgium).
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7

Micro-CT Analysis of PLA-CD 5% Scaffolds

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The internal microporous organization and potential structural defects in PLA-CD 5% scaffolds were investigated through Micro-CT acquisitions, utilizing a Bruker Skyscan 1272 system (Großweikersdorf, Austria). The measurements were conducted at a voltage of 40 kV and a current of 250 µA, with a rotation step of 0.2° and a resolution of 4.5 µm.
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8

High-Resolution Murine Bone Microstructure Analysis

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The high resolution Skyscan 1272 system (Bruker) was used for µCT analysis with the following parameters: 60 kV as source voltage, 83 μA as source current, 0.5 mm aluminum filter, 5 µm pixel size, 0.4° rotation step. Data reconstruction was performed with NRecon (Bruker) and data analysis with CTAn (Bruker). Trabecular bone parameters were defined in a volume of interest (VOI) between 1 and 2.5 mm below the growth plate, whereas cortical bone parameters were quantified in a VOI between 2.5 to 3 mm below the growth plate. Analysis was performed according to the guidelines of the American Society for Bone and Mineral Research (20 (link)). 3D models were constructed with CTvox software (Bruker).
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9

Micro-CT Analysis of Bone Regeneration

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Formation of new bone in defect areas was evaluated by Micro-CT (Bruker Skyscan 1272 system, Kontich, Belgium). The parameter is set to 55 kV and 114 m A with a thickness of 0.048 mm per slice in medium-resolution mode, 1024 reconstruction matrix, and 200 ms integration time. These images and parameters of trabecular bone with a distance of 1 mm proximal from the end of the growth plate in femoral metaphysis were compared between the Sham group and OVX group to confirm the osteoporosis rat model. For evaluation of bone formation in the defect area, a 1.5-mm-diameter area in the center of each bone defect was selected as the volume of interest (VOI). After 3D reconstruction, bone mineral density (BMD), bone mineral content (BMC), bone volume fraction (BV/TV), trabecular number(Tb.N), trabecular thickness (Tb.Th), and trabecular separation(Tb.Sp) were automatically determined for identification of osteoporosis model, while BMD, BV/TV, Tb. N, Tb. Th, Tb. Sp, and the mean connective density (Conn. D) in VOI regions were used to evaluate new bone formation, using a protocol provided by the manufacturer of the Micro-CT scanner as previously described [24 (link), 25 (link)].
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10

Microstructural Analysis of Alveolar Bone

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Tomographic images from left hemi-mandibles (n = 5/group) were acquired using a SkyScan 1272 system (Bruker microCT; Kontich, Belgium) [70 kVp and 142 μA; 0.5 mm aluminum filter; 9 μm isotropic voxel; 1100 ms exposure time, 2 frames averaging, and 180° rotation (0.5° rotation step)], and three-dimensionally reconstructed (NRecon software; v1.6; Bruker microCT). Alveolar bone loss was evaluated in the first molar region, a region of interest (ROI) was standardized from defined anatomical points (upper limit: furcation roof; lower limit: proximal root apex; distal limit: 2nd molar proximal root; proximal limit: 1st molar proximal root, and vestibular and lingual limits: limits of the alveolar bone). A volume of interest (VOI) was automatically delimited by the bone edges and the tooth volume exclusion. The bone percentage (BV/TV), trabecular number (Tb.N), thickness (Tb.Th), and separation (Tb.Sp) were analyzed [25 (link)].
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