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17 protocols using elisa kit

1

Quantifying VSVG/HIV-1 Viral Infectivity

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VSVG plasmid and env-deficient HIV vector containing luciferase reporter (pNL4-3.luc.RE- or pNL4-3.luc.RE-RT-mutant) were co-transfected into HEK 293T cells. 48 h post transfection, the supernatant was collected and filtered through 0.45 μm filters, the harvested VSVG/HIV-1 or VSVG/HIV-1RT-mutant virions were quantified by using an ELISA kit (ZeptoMetrix, Cat. 0801111). HEK 293T cells were seeded on 48-well plates at a density of 3 × 104 cells/well one day prior to infection . The tested compounds were added to wells 15 min ahead of VSVG/HIV-1 or VSVG/HIV-1RT-mutant infection (0.1 ng p24/well). The infected cells were lysed 48 h postinfection, and the luciferase activity was measured using a Sirius luminometer (Berthold Detection System) according to the manufacturer’s instructions. Infectivity (%) = luciferase activity tested compound/luciferase activity DMSO × 100 [56 ].
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2

Establishing T-Cell Leukemia Cell Lines

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The Human acute T lymphoblastic leukaemia cell lines (MT-4 and MOLT-4) were cultured in RPMI-1640 medium (GIBCO, USA) supplemented with 10% heat-inactivated fetal bovine serum (Sigma),1% Natrium bicarbonate, 100 U/mL penicillin G, and 100 μg/mL streptomycin (culture medium) and incubated for three days in a CO2 incubator. The Virus persistently infected MT-4 cells (MT-4/HIV-1) which were obtained from a co-culture of HIV-1 infected PBMCs with uninfected PBMCs using stimulated phytohemagglutinin (PHA, 10 μg/mL). The co-culture is incubated in growth RPMI- 1640 medium containing T cell growth factor cytokine, IL-2 for three days in CO2 incubator. After three days of infection, p24 antigen in supernatant was measured by ELISA kit (Zeptometrix co.), according to the manufacturer’s instructions.
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3

Quantification of HIV-1 p24 Gag

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Following different treatment of ACH-2 and J-Lat cells, supernatants were collected and analyzed for the amount of HIV-1 p24 Gag. Gag (p24), was measured by using enzyme-linked immunosorbent assay (ELISA) kit (Zeptometrix, Buffalo, NY, USA) according to the manufacturer’s protocol.
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4

Virus Entry Assay for Cell Lines

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Input virus samples for entry assays were prepared from transfected 293T cells as above, and quantified by the HIV-1 p24 antigen enzyme-linked immunosorbent assay (ELISA) kit (ZeptoMetrix Corporation). Entry assays were performed as previously described (von Schwedler et al., 1993 (link); Adachi et al., 1996 ). Briefly, HSC-F cells (106) were incubated with viruses (100 ng of p24) for 2 h at 4°C, extensively washed, and collected as viral binding fractions. To determine virus entry level, HSC-F cells treated with viruses at 4°C as above were trypsinized for 5 min at 37°C, extensively washed, and incubated for 2 h at 37°C for preparation of viral entry fractions. The binding and entry fractions were lysed, and the p24 level of samples was determined by the ELISA kit as above. Entry efficiency of each sample was calculated as p24 level of entry fraction/p24 level of binding fraction. NL4-3 and NL-Kp (NL4-3ΔEnv) were used as positive and negative controls, respectively.
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5

Studying ISG Protein Expression in Viral Infection

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HEK293 or PC3 cells seeded in 12-well plates were cotransfected with pNL4-3 and either an ISG-encoded protein expression vector or an empty vector using Effectene (Qiagen) for HEK293 cells or Lipofectamine 3000 (Thermo) for PC3 cells. In experiments with siRNA, cells were transfected with 20 pmol of siRNA using Lipofectamine RNAiMAX (Thermo) one day prior to transfection with pNL4-3. Two days post-transfection, cell lysates and supernatants were harvested and subjected to immunoblotting. In some experiments, 10 µM MG132 (Merck #474790) or 100 µM chloroquine (Cayman Chemical #14194) were added 16 h before cells were harvested. The p24 antigen levels in the supernatants were measured using an ELISA kit (Zepto Metrix). siRNAs were purchased from Qiagen (catalogue number #SI03650318 for the negative control and #SI00627214 and #SI00627228 for MAL).
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6

Lentiviral Knockdown of HIF-1α in HepG2 Cells

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A shRNA against human HIF-1α was cloned into the pLKO.1 vector according to the manufacturer's protocol (Addgene, Inc., Cambridge, MA, USA). The target sequence is 5′-CTGATGACCAGCAACTTGA-3′. pLKO.1, scrambled shRNA (negative control), pMD2.G (used for virus packaging) and psPAX2 (used for virus packaging) were purchased from Addgene, Inc. All constructs were verified by sequencing. Lentiviruses were produced by co-transfecting 293FT cells (Invitrogen; Thermo Fisher Scientific, Inc.) in 10-cm dishes with 10 µg pLKO.1-shRNA, 2.5 µg pMD2.G and 7.5 µg psPAX2 using Lipofectamine 2000 (Invitrogen; Thermo Fisher Scientific, Inc.). Viruses were collected between 16 and 60 h after transfection, and tittered for p24 levels using an ELISA kit (ZeptoMetrix Corporation, Buffalo, NY, USA). HepG2 cells were infected with HIF-1α shRNA at a multiplicity of infection of 20 in the presence of 6 µg/ml polybrene. Virus-containing medium was removed after 16 h and replaced with fresh DMEM. After 24 h, the cells were used experimentally.
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7

Pseudotyped HIV-1 Infection Assay

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For infection-based assays, cells were infected with VSV-G-pseudotyped HIV-1 at an moi (multiplicity of infection) of 0.01 or 0.2 for eight hours and cultured for two days. In experiments using kinase inhibitors, cells were treated with each inhibitor at 12 h before virus infection. Virus-containing supernatants were harvested and filtered to remove cell debris, and viral p24 antigens were measured using an ELISA kit (Zepto Metrix). The cell lysates were prepared using HBST buffer (10 mM HEPES, pH 7.4, 150 mM NaCl, 0.5% Triton X-100) containing a protease inhibitor cocktail (Roche). Immunoblotting assays and the antibodies used have been described previously [61 (link)]. The culture supernatants and cell lysates were subjected to p24 ELISA or immunoblotting assays, as described above.
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8

Quantification of p24 Antigen by ELISA

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A commercially available enzyme-linked immunosorbent assay (ELISA) kit (Zeptometrix, Buffalo, NY, USA) was used to quantitate the amount of p24 in the culture supernatants.
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9

IL-1β and HIV-1 Infection Dynamics

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IL-1β ELISA assay was performed according to the manufacturer's protocol using cell culture supernatants (Chondrex, Inc., Redmond WA). Culture supernatants from cells incubated with HIV-1 alone or HIV-1 and Meth/IFNα/IL-1RA were harvested on days 0, 1, 3, and 7. P24 ELISA was performed using the Zeptometrix ELISA kit according to the manufacturer's protocol (Zeptometrix Corporation, Buffalo NY). Supernatants were stored at −80°C.
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10

HIV-1 Infection Assay in TZM-bl Cells

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For HIV-1 infection assay, sorted TZM-bl cells (1 × 105) were seeded in a 24-well plate one day before HIV-1 infection. These cells were then challenged with HIV-1NL4-3, HIV-1BH10, HIV-1HXB2 or HIV-1YU2 for 8 hours in a total volume of 500 µl serum-free medium. After removing the culture medium and washing cells with PBS 3 times, the cells were cultured in fresh complete media for indicated days. Then, the cells were harvested for luciferase activity analysis with a Bright-GloTM Luciferase Assay System Kit (Promega, WI, USA) by a luminometer (Promega Glomax, USA). At the same time, the supernatant was collected for HIV-1 p24 antigen detection using an ELISA kit (ZeptoMetrix).
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