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12 protocols using tuj 1

1

Isolation and Culture of Rat Cortical Neurons

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Primary cultured cortical neurons were isolated from embryonic Sprague-Dawley rats (E17). After digested by 0.25% trypsin (Invitrogen, Carlsbad, CA), cells were collected and suspended in Dulbecco’s modified eagle medium (DMEM) containing 10% horse serum, 1% l-glutamine and antibiotic mixture. The resulting single cell suspensions were seeded on 24- or 6-well plates pre-treated with poly-d-lysine (Sigma, St. Louis, MO, United States). After seeded for 4 h, the culture medium was replaced with neurobasal medium containing 2% B27 supplement, 1% l-glutamine and antibiotics mixture and cell culture was maintained at 37°C and 5% CO2. Immunostaining of Tuj-1 (1:200, Santa Cruz, Billerica, CA), an antibody of neuron-specific beta III tubulin, was employed to identify the mature and purity which were confirmed to be over 95%. After those cells were cultured for 10 days (DIV10), many neurites from different neurons were merged, indicating the maturation of neurons. Those cells were used for following experiments.
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2

Cardiac and Liver Marker Assay

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Troponin I (Santa Cruz Biotechnology), MLC2v (Proteintech Europe), Tuj1 (Santa-Cruz), FOXA2 (Santa Cruz), Alpha foeto protein (Sigma-Aldrich), Albumin (Cedarlane).
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3

Immunoblotting Analysis of Neural Markers

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Immunoblotting was performed as previously described (26 (link)). Antibodies used were Cav3.2, BaxN/" target="_blank">Nestin, Tuj-1 and HIF1α (Santa Cruz Biotechnologies, Santa Cruz, CA), p27, GFAP, BMI1, MAP2, Bax, Sox2, mTOR, HIF2 and PARP (Cell Signaling, Beverly, MA), β-actin and GAPDH (Santa Cruz Biotechnologies, Santa Cruz, CA).
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4

Western Blot Analysis of Neuronal Markers

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Proteins from P19 cells were homogenized in M-PER lysis buffer (Pierce Chemical Co., Rockford, IL). Extracted proteins (15 µg) were separated by SDS-polyacrylamide gel electrophoresis and were electrophoretically transferred onto a membrane according to the previously described approach [20] (link). The membrane was blocked in blocking buffer and incubated with antibodies to NELL2 (Santa Cruz Biotech., Santa Cruz, CA, Catalogue No. sc-54637), β-actin (Sigma-Aldrich, Catalogue No. A5441), Tuj1 (Santa Cruz Biotech., Catalogue No. sc-5274), NeuN (Millipore, Billerica, MA, Catalogue No. MAB377), N-cadherin (Abcam, Boston, MA, Catalogue No. ab76057), phosphorylated ERK (pERK) (CELL Signaling Technology, Beverly, MA, Catalogue No. 9101), ERK (Santa Cruz Biotech., Catalogue No. sc-153), or c-Fos (Santa Cruz Biotech., Catalogue No. sc-7202). Blots were developed using horseradish peroxidase-conjugated anti-goat secondary antibody (Santa Cruz Biotech., Catalogue No. sc-2020), anti-mouse secondary antibody (Santa Cruz Biotech., Catalogue No. sc-2005) or anti-rabbit secondary antibody (Santa Cruz Biotech., Catalogue No. sc-2004). Immunoreactivity was detected with an enhanced chemiluminescence (ECL) kit (Amersham Pharmacia Biotech., Buckinghamshire, UK).
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5

Western Blot Analysis of Neural Proteins

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The procedure had been previously described (Chen et al., 2011 (link)). In brief, the cells were lysed and the protein concentrations of the lysates were determined. Then, the lysates were separated by 8% SDS-PAGE and transferred to polyvinylidene fluoride (PVDF) membranes. The membranes were blocked, followed by incubation with primary antibodies and then POD-labeled secondary antibodies (1:12500; Roche, Mannheim, Germany). The primary antibodies were used as follows: TuJ1 (1:1000), TET1 (1:500), srGAP3 (1:1000), and α-Tubulin (Santa Cruz; 1:5000). The signals were detected by BM Chemiluminescence Western Blotting kit (Roche, Mannheim, Germany).
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6

Comprehensive Neuronal Marker Antibody Panel

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CSPα (R807, gift from Dr. Thomas C. Südhof), GAPDH (G-9, Santa Cruz), MAP2 (AB5622, Millipore; M1406, Sigma), myc (9E10, deposited to the DSHB by Bishop, J.M.; C3956, Sigma), VDAC1 (N152B/23, Neuromab), Na,K-ATPase (a5, deposited to the DSHB by Fambrough, D.M.), NF-165 (2H3, deposited to the DSHB by Jessell, T.M./Dodd, J.), SNAP-25 (SMI81, Sternberger Monoclonals), synapsin (E028, gift from Dr. Thomas C. Südhof), synaptobrevin-2 (69.1, Synaptic Systems), synaptophysin (clone 7.2, Synaptic Systems), αSyn (clone 42, BD Biosystems; clone 4D6, Abcam), βSyn (sc-136452, Santa Cruz), γSyn (SK23 (Ninkina et al., 2003 (link))), pS129 αSyn (pSyn #64, FUJIFILM Wako), SV2 (P915, gift from Dr. Thomas C. Südhof; SV2, deposited to the DSHB by Buckley, K.M.), α-tubulin (12G10, DSHB), Tuj1 (2G10, Santa Cruz), and tyrosine hydroxylase (MAB318, Millipore).
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7

Immunofluorescence Characterization of siPSCs

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The siPSCs were identified after typical colony formation. The differentiation ability of EB was measured on the 7th day in a 24-well cell culture plate. Cells were fixed with 4% paraformaldehyde for 20 min, permeabilized with 0.2% Triton X-100 for 10 min, and then blocked with 2% BSA for 30 min at room temperature. The primary antibodies against Sox2 (1:200, Abcam), Oct-3/4 (1:100, Santa Cruz), Nanog (1:100, Santa Cruz), Rex-1 (1:100, Santa Cruz), SSEA-1 (1:20, Developmental Studies Hybridoma Bank), E-cadherin (1:100, BD), Tra-1-60 (1:200, Millipore), Tra-1-81 (1:200, Millipore), smooth muscle actin (SMA, 1:200, Santa Cruz), β-tubulin (Tuj-1, 1:100, Santa Cruz), and human Sox17 (Sox17, 1:100, R&D) were added and incubated overnight at 4℃. Cy3-labeled anti-mouse IgG (1:500, Beyotime, China) and anti-mouse IgM (1:500, Bioss, China) secondary antibodies were added for 1 h at 37℃ for detection of target proteins. Nuclei were stained with DAPI (1:1,000, Sigma) for 5 min.
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8

Immunofluorescent Staining of ReNcell VM Cells

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ReNcell VM cells were proliferated in chamber slices coated with laminin and subsequently differentiated as described above. After the cells had been incubated for 30 min with blocking solution (5% normal goat serum with 0.3% TritonX-100 in PBS), the mouse primary antibody Tuj-1 (Santa Cruz) was added and incubated for 30 min at room temperature. After a wash with PBS, the secondary antibodies Alexa Fluor 488 or Alexa Fluor 568 goat anti-mouse (Molecular Probes) were added. Incubation was for 60 min at room temperature. Subsequently, the slides were embedded with mounting medium containing DAPI (Vectashield) and the staining was imaged using a fluorescent microscope system (BZ-8000; Keyence Deutschland GmbH).
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9

Brain Tissue Immunohistochemistry Protocol

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Brain tissues were sectioned on a standard rotary microtome (Leica, Berlin, Germany). Tissue sections were collected and counterstained with hematoxylin-eosin (HE). Then, the sections were subjected to staining with the primary antibodies. Primary antibodies were tyrosine hydroxylase (TH, 1:1000) (Santa Cruz Biotech., Dallas, TX, USA), P-CREB (1:500, Upstate Comp., Lake Placid, NY, USA), caspase 3 (1:500), or MDA (1:100). After raining with PBS, sections were stained with 3,3′-diaminobenzidine (DAB) as described [24 (link)]. Subsequently, the selected sections were further performed by using Tuj1 (1:500), GFAP (1:500), and IBA1 antibody (1:200, Santa Cruz Biotech., Dallas, TX, USA). The stained sections were counterstained with DAPI, mounted and examined microscopically.
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10

Comprehensive Neuronal Marker Antibody Panel

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CSPα (R807, gift from Dr. Thomas C. Südhof), GAPDH (G-9, Santa Cruz), MAP2 (AB5622, Millipore; M1406, Sigma), myc (9E10, deposited to the DSHB by Bishop, J.M.; C3956, Sigma), VDAC1 (N152B/23, Neuromab), Na,K-ATPase (a5, deposited to the DSHB by Fambrough, D.M.), NF-165 (2H3, deposited to the DSHB by Jessell, T.M./Dodd, J.), SNAP-25 (SMI81, Sternberger Monoclonals), synapsin (E028, gift from Dr. Thomas C. Südhof), synaptobrevin-2 (69.1, Synaptic Systems), synaptophysin (clone 7.2, Synaptic Systems), αSyn (clone 42, BD Biosystems; clone 4D6, Abcam), βSyn (sc-136452, Santa Cruz), γSyn (SK23 (Ninkina et al., 2003 (link))), pS129 αSyn (pSyn #64, FUJIFILM Wako), SV2 (P915, gift from Dr. Thomas C. Südhof; SV2, deposited to the DSHB by Buckley, K.M.), α-tubulin (12G10, DSHB), Tuj1 (2G10, Santa Cruz), and tyrosine hydroxylase (MAB318, Millipore).
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