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5 protocols using safranin o

1

Safranin O Staining of Cranial Base

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Synchondroses in paraffin sections made from the demineralized cranial base were stained with safranin O. Briefly, 4% PFA/PBS-fixed mouse heads were decalcified in 10% EDTA/0.1 M Tris (final pH 7.0) for one week at room temperature with agitation and embedded in paraffin. Paraffin sections (4 μm) were cut with a microtome blade (PATH BLADE + PRO, Matsunami) on a sliding microtome (Yamato Kohki, REM-710). After deparaffinization, sections were stained with Weigert’s iron haematoxylin solution, washed with 0.5% HCl in 70% ethanol, and stained sequentially in 0.05% fast green (Polysciences) and 0.1% safranin O (Polysciences). Slides were then evaluated by microscopy (BX53, Olympus).
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2

Chondrocyte Culture and Staining Assays

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Dulbecco’s minimum essential medium (DMEM), fetal bovine serum, stock antibiotic/antimycotic mixture were obtained from Invitrogen (Carlsbad, CA). 45Calcium was obtained from Perkin-Elmer (Boston, MA). Antibody specific to MMP-13 (Lifespan Biosciences, Seattle, WA), ADAMTS5 (Santa Cruz Biotechnology, Dallas, TX), Cox-2 (Santa Cruz Biotechnology, Dallas, TX), and CCL-5 (Bioss, Woburn, MA) were obtained from the commercial sources indicated. Safranin-O, fast green, picrosirius red, and alcian blue were obtained from Polysciences (Warrington, PA). PC and PC-E were prepared according to the method described [32 (link)]. All other chemicals were obtained from Sigma-Aldrich (St. Louis, MO).
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3

Engineered Biomaterials for Tissue Regeneration

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Poly(dimethylsiloxane) (PDMS) pre-polymer (Sylgard 184) and a curing agent were purchased from Dow Corning (Midland, MI, USA). Tris-HCl was purchased from Biosesang (Seongnam, Korea). Dopamine hydrochloride and Alizarin Red S were obtained from Sigma-Aldrich (St. Louis, MO, USA). MSCs, HUVECs, MSC growth medium (MSCM), endothelial cell growth medium (ECM), endothelial cell growth supplements (ECGS), MSC growth supplements (MSCGS), fetal bovine serum (FBS), penicillin/streptomycin (P/S) solution, trypsin-EDTA (T/E) solution, Dulbecco’s phosphate-buffered saline (DPBS), MSC chondrogenic differentiation medium (MCDM), MSC chondrogenic differentiation supplement (MCDS), MSC osteogenic differentiation medium (MODM), and MSC osteogenic differentiation supplement A and B (MODS-A and MODS-B) were purchased from ScienCell (Carlsbad, CA, USA). Transforming growth factor-β3 (TGF-β3) and live/dead viability/cytotoxicity kits were purchased from Thermo Fisher Scientific (Waltham, MA, USA). Safranin O was obtained from Polyscience (Warrington, PA, USA). Norland optical adhesive63 (NOA63) was purchased from Norland Products (Jamesburg, NJ, USA). Polystyrene (PS) sheets and poly(ethylene terephthalate) (PET) film were obtained from Goodfellow (Pittsburgh, PA, USA).
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4

Immunostaining of MMP13 in Tissue

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Safranin-O and Fast green were obtained from Polysciences, Inc. (Warrington, Pennsylvania). An antibody specific to MMP13 was obtained from LifeSpan BioSciences, Inc. (Seattle, Washington). A secondary reagent for immunostaining (ImmPRESS reagent kit) was obtained from Vector Laboratories, Inc. (Burlingame, California). CM-01 was obtained from a commercial source and formulated in our laboratory.
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5

Safranin O Staining of Proteoglycans in Chondrogenic Hydrogels

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To stain the proteoglycans in the ECM within the hydrogel samples and cell pellets, safranin O staining was performed after 21 days of chondrogenic differentiation. The slides were washed with water to remove the cryocompound and stained with Weigert's hematoxylin (12 min, room temperature; Sigma-Aldrich), blued with tap water (10 min), rinsed with deionized water, and stained with fast green (0.02% w/v; Fluka) for 6 min to visualize collagenous matrix in green/blue. After washing with acetic acid (1%; Fluka), the samples were incubated with safranin O (0.1%, 15 min; Polysciences) to stain proteoglycans in red. After washing with deionized water, staining was differentiated with ethanol (70%; Alcosuisse) and subsequently dehydrated with series of alcohols (96% ethanol, ethanol absolute, xylene) and sealed using a coverslip (Eukitt; Sigma-Aldrich). Microscopic evaluation was performed using a bright-field microscope (Olympus BX63; Olympus).
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