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46 protocols using anti cd8 pe

1

Lymphocyte Subset and T-Cell Differentiation Analysis

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Peripheral blood cells were surface-stained with anti-CD45-FITC/CD16 + 56-RD1/CD19-ECD/CD3-PC5 (Beckman Coulter, Brea, CA, USA) to define lymphocyte subsets, and anti-CD45RA-FITC, anti-CD8-PE, anti-CCR7-APC (Biolegend, San Diego, CA, USA) anti-CD3-ECD (Beckman Coulter), anti-CD4-PerCP (BD Bioscience, San Jose, CA, USA) to define differentiation degree of T lymphocytes. One hundred microliters of peripheral whole blood from volunteers were stained with different combinations of labeled monoclonal antibodies for 20 min at room temperature. Samples were red-blood lysed with FACS Lysing Solution (BD Biosciences), washed in PBS, and analyzed using Kaluza software in a Navios cytometer (Beckman-Coulter, Brea, CA, USA). Appropriate isotype control antibodies were used for marker settings.
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2

Multiparameter Flow Cytometry Analysis

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These following antibodies (Abs) were used for surface marker staining and ICS combined with flow cytometry (all Abs were from Biolegend): anti-CD3-PErCP-cy5.5 (UCHT1), anti-CD3-FITC (UCHT1), anti-CD3-PE (HIT3a), anti-CD4-APC (OKT4), anti-CD4-APC-cy7 (RPA-T4), anti-CD8-PE (RPA-T8), anti-CD8-APC-cy7 (SK1), anti-CD14-FITC (HCD14), anti-IFN-γ-PE (4S.B3), anti-TNF-α-APC (MAb11), anti-IL-17A-PE-cy7 (BL168), anti-Foxp3-PE (206D), anti-TGF-β-PE-cy7 (TW4-2F8), anti-Perforin-PC (dG9), anti-granzyme A-PE (CB9),.
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3

Glycosylated-PEG Polymer for Immunomodulation

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Galactose-polyethylene glycol polymer chain (glycosylated-PEG, 35kDa) was purchased from Tianjin Jenkem Technology Co. Ltd (Tianjin, China). Annexin V-FITC/PI and CCK8 kit were purchased from Dojindo Laboratories. Anti-CD11c-APC, anti-CD4-FITC, anti-CD86-PE-Cy7, anti-CD3-APC, anti-Foxp3-PE-Cy7, anti-IFN-γ-PE-Cy7, anti-CD80-PE, anti-CD8-PE, anti-3-FITC, anti-NK1.1-APC, and anti-CD25-Percp-Cy5.5 were purchased from BioLegend, Inc (San Diego, CA, USA). LDH kits were purchased from Abcam (Cambridge, UK).
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4

Memory T Cell Analysis by Flow Cytometry

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For memory T cell analyses, splenocytes from various vaccinated groups were harvested, lysed with 1x RBC lysis buffer, washed and 1 × 106 cells per well was utilized for each reaction followed by flow cytometry (BD FACSCaliber, Hampton, NH, USA) analysis. Splenocytes were stained with anti-CD44-APC (Biolegend, San Diego, CA, USA), anti-CD4-FITC (Biolegend, San Diego, CA, USA), anti-CD8-PE (Biolegend, San Diego, CA, USA), anti-CD25-APC (Biolegend, San Diego, CA, USA), or anti-Foxp3-APC (Biolegend, San Diego, CA, USA).
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5

Multicolor Flow Cytometry Analysis

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To analyse chemokine receptor expression by FACS, cells were incubated first with blocking solution (mouse serum in PBS) during 20 minutes, followed by a second incubation with a biotinylated mouse anti-CCR9 antibody (1 μg/106 cells) (eBioscience, CA, USA) in FACS buffer (PBS containing 2% fetal bovine serum and 0.1% NaN3) for 30 min at 4°C. Finally cells were incubated with a solution of streptavidin-APC or streptavidin-PerCP during 30 min at 4°C in the dark.
For phenotypic detection of other cell populations, single cell suspensions were preincubated with a mixture of anti-CD16/CD32 antibodies (BioLegend, CA, USA) during 10 min at room temperature. Following first incubation and several washes, cells were incubated with either anti-CD4-PeCy7, anti-CD8-PE, anti-Gr1-PeCy5 (BioLegend, CA, USA), or anti-Siglec (BD, CA, USA) antibodies in FACS buffer for 30 min at 4°C (according to manufacturer's suggestions). Finally, samples were analyzed in Attune® Acoustic flow cytometer (Life Technologies, Thermo Fisher Scientific, MA, USA). Analysis of data was performed with FlowJo 8.7 software (Tree Star, Inc.).
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Multiparametric Flow Cytometry Analysis

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Anti-CD45 BV510 or APC, anti-Ly6C APC-Cy7, anti-Ly6G PE, anti-MHCII BV421, anti-CD11b PerCPCy5.5, anti-CD11c PE-Cy7, anti-IFNγ PE, anti-TNFα APC, anti-CD3 PerCPCy5.5, anti-CD8 PE, anti-CD4 APC-Cy7, anti-NKp46 PE-Cy7, anti-B220 Alexa488 were from Biolegend (San Diego, CA). Anti-CD16/32 (Fc-block), anti-SiglecF PE and anti-F4/80 Alexa488 were from BD Biosciences (San Diego, CA). Blue fixable Live/Dead was from Invitrogen. Anti-CCR2 (clone MC-21) was provided by Dr. Matthias Mack. Anti-IL5 (clone TRFK5) was provided by Dr. James Lee (Mayo Clinic, Scottsdale, AZ). Recombinant mouse IFNγ was from R&D Systems. Collagenase D was from Roche Diagnostics (Indianapolis, IN) and Collagenase VIII was from Sigma-Aldrich (St. Louis, MO). 1-oleoyl-2-hydroxy-sn-glycerol-3-phosphocholine (LPC) was from Avanti Polar Lipids, Inc. (Alabaster, AL).
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7

Multimodal Nanoplatform for Cancer Theranostics

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Silicon phthalocyanine dichloride (SiPCCl2), 3‐aminopropyltrimethoxysilane (APTES), Hoechst 33342, tetraethylorthosilicate (TEOS), and 2, 7‐dichlorodihydroflfluorescein diacetate (DCFH‐DA) were obtained from Sigma‐Aldrich. Hexadecyl trimethylammonium chloride (CTAC), triethanolamine (TEA), and FeCl3 were obtained from Sinopharm Chemical Reagent Co. Ltd. Dylight550‐NHS was purchased from Thermo Fisher Scientific (Waltham, USA). ICG‐NHS was obtained from Xi'an Rixi Biological Technology Co. Ltd (Xi'an, China). Calcein‐AM/propidium iodide (PI), and 1, 3‐diphenylisobenzofuran (DPBF) were obtained from KeyGen BioTech (Shanghai, China). Annexin V‐FITC/PI and CCK8 were obtained from Dojindo Laboratories. Annexin V‐APC/PI was obtained from Jiangsu KeyGEN BioTECH Corp., Ltd (Jiangsu, China) Neutrophil (mouse) isolation Kit was purchased from Cayman Chemical (Michigan, USA). Anti‐CD11c‐APC, anti‐CD137‐APC, anti‐CD11b‐APC, anti‐CD86‐PE‐Cy7, antiCD3‐APC, anti‐CD80‐PE, anti‐CD8‐PE, anti‐Ly‐6G/Ly‐6C‐PE, CD54, CD95, anti‐CD8 antibody, and anti‐CD69‐FITC was purchased from BioLegend, Inc (San Diego, CA, USA). ELISA kits from Neobioscience Technology (Shenzhen, China) were obtained to detect the IFN‐γ, TNF‐α, IL‐12, and IL‐2. H22 mouse liver cancer cell‐specific neoantigen (sequence: HTDAHAQAFAALFDSMH) was obtained from GenScript USA Inc.
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8

Immunological Assays with Custom Reagents

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Ethylenediamine tetraacetic acid (EDTA), 4 % paraformaldehyde, HSA, Coomassie brilliant blue G250 and hematoxylin and eosin (H&E) staining kit were purchased from Beijing Solarbio Technology Co., Ltd (China). 4′,6-Diamidino-2-phenylindole Dihydrochloride (DAPI), trypan blue and glutathione (GSH) were obtained from Sigma-Aldrich Chemical Co. (USA). SMCC and 5,5′-dithiobis (2-nitrobenzoic acid) (DTNB) were purchased from Adamas-beta (Shanghai, China). BCA protein quantitation kit and cell freezing medium were purchased from Beyotime Biotechnology Co., Ltd. (China). DMEM medium, RPMI 1640 medium, phosphate buffer saline (PBS), fetal bovine serum (FBS), penicillin and streptomycin were purchased from Gibco (USA). Interleukin-4 (IL-4) and Granulocyte-macrophage colony-stimulating factor (GM-CSF) were purchased from Wolcavi Biotech (Beijing, China). Mouse interferon-gamma (IFN-γ) enzyme-linked immunospot (ELISpot) plus kit was purchased from Mabtech (Sweden). Anti-CD11c-APC, anti-CD80-PE and anti-CD86-PE-Cy7 were purchased from Thermo Fisher Scientific (USA). Anti-CD3-APC and anti-CD8-PE were purchased from BioLegend, Inc (USA). Mouse IFN-γ enzyme-linked immunosorbent assay (ELISA) kit, mouse interferon beta (IFN-β) ELISA kit and mouse tumor necrosis factor alpha (TNF-α) ELISA kit were purchased from Fankewei (Shanghai, China).
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9

Comprehensive Antibody Panel for Immune Signaling

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The following antibodies were used: anti–PD-L1 (Abcam, no. ab213480), anti–Caspase-3 (CST, no. 9662), anti-GSDME (Abcam, no. ab215191), anti-Granzyme B (Abcam, no. ab255598), anti-STING (CST, no. 50494), anti–phospho-STING (Ser365) (CST, no. 72971), anti–TBK-1 (CST, no. 3504), anti–phospho-TBK-1 (Ser172) (CST, no. 5483), anti–IRF-3 (CST, no. 4302), anti–phospho-IRF3 (Ser396) (CST, no. 4947S), anti–γ-H2AX (phospho Ser139) (Abcam, no. ab81299), anti-53BP1 (Abcam, no. ab175933), anti–phospho-53BP1 (Ser25) (Abcam, no. ab70323), anti–TREX-1 (Santa Cruz, no. sc-133112), anti-GFP (Beyotime Inc., no. AG279), and anti–β-actin (Abcam, no. ab8226). For flow cytometry analysis, anti–CD3-APC (Biolegend, no. 100236) and anti–CD8-PE (Biolegend, no. 100707) were used.
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10

Magnesium-based Oxidative Stress Assay

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Magnesium (Mg) rods were obtained from JingJun Materials Technology Co. Ltd. (Suzhou, China). Chloroplatinic acid (H2PtCl6) and 2′,7′-dichlorofluorescein diacetate (DCFH-DA) were purchased from Sigma-Aldrich Co., Ltd. Sodium hydroxide (NaOH) was purchased from Sinopharm Chemical Reagent Co., Ltd. Magnesium chloride (MgCl2), magnesium hydrate [Mg(OH)2], and MB were purchased from Aladdin Co., Ltd. All chemicals and reagents were of analytical grade and used without further purification. Anti-CD3-FITC (Biolegend, clone 17A2, Catalog: 100204), anti-CD4-APC (Biolegend, clone GK1.5, Catalog: 100412), anti-CD8-PE (Biolegend, clone 53–6.7, Catalog: 100708), anti-CD45-FITC (Biolegend, clone I3/2.3, Catalog: 147710), anti-CD11b-PE (Biolegend, clone M1/70, Catalog: 101208), anti-Gr-1-APC (Biolegend, clone RB6-8C5, Catalog: 108412) were obtained from Biolegend and diluted at 1:300 for cell staining.
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