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4 protocols using hrp conjugated β actin antibody

1

Western Blot Analysis of VEEV Proteins

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Protein lysates were collected using Blue Lysis Buffer and analyzed by Western blot as previously described [22 (link)]. The recipe for Blue Lysis Buffer consists of 25 mL 2x Novex Tris-Glycine Sample Loading Buffer SDS (ThermoFisher Scientific, Waltham, MA USA, Cat# LC2676), 20 mL T-PER Tissue Protein Extraction Reagent (ThermoFisher Scientific, Waltham, MA USA, Cat# 78510), 200 µL 0.5 M EDTA pH 8.0, 2–3 complete Protease Cocktail tablets for 50 mL, 80 µL 0.1 M Na3VO4, 400 µL 0.1 M NaF, 1.3 mL 1 M dithiothreitol. Briefly, primary antibodies against capsid of Venezuelan equine encephalitis virus, TC-83 (Subtype IA/B) Capsid (antiserum, Goat) (BEI resources, NR-9403), VEEV GP (antiserum, Goat), VEEV nsP2 (Kerafast, Boston, MA, USA, Cat# 8A4B3), PERK (C33E10) (Cell Signaling, Danvers, MA, USA, Cat# 3192S), or horse radish peroxidase (HRP)-conjugated β-actin antibody (Abcam, Cambridge, MA, USA, Cat# ab49900) were diluted in 3% milk solution per the manufacturer’s recommended dilutions followed by the addition of the appropriate secondary antibody either anti-rabbit HRP-conjugated (Cell Signaling, Danvers, MA, USA, Cat# 7074), or anti-goat HRP-conjugated antibody. PDVF membranes were imaged on a Chemidoc XRS molecular imager (Bio-Rad, Hercules, CA, USA) using the SuperSignal West Femto Maximum Sensitivity Substrate kit (ThermoFisher, Scientific, Waltham, MA, USA, Cat# 34095).
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2

Protein Extraction and Western Blot Analysis

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Protein lysates were collected using Blue Lysis Buffer and analyzed by western blot as previously described (Austin et al., 2012 ). The recipe for Blue Lysis Buffer consists of: 25 ml 2x Novex Tris-Glycine Sample Loading Buffer SDS (Invitrogen, Cat# LC2676), 20 ml T-PER Tissue Protein Extraction Reagent (ThermoFisher, Cat# 78510), 200 μl 0.5M EDTA pH 8.0, 2–3 complete Protease Cocktail tablets for 50 ml, 80 μl 0.1M Na3VO4, 400 μl 0.1M NaF, 1.3 ml 1M dithiothreitol. Briefly, primary antibodies against capsid of Venezuelan equine encephalitis virus, TC-83 (Subtype IA/B) Capsid (antiserum, Goat) (BEI resources, NR-9403), EGR1 (44D5) (Cell Signaling, Cat# 4154S), ERK1/2 (Cell Signaling, Cat# 4695S), PERK (C33E10) (Cell Signaling, Cat# 3192S), or horse radish peroxidase (HRP)-conjugated β-actin antibody (Abcam, Cat# ab49900) were diluted in 3% milk solution per the manufacturer's recommended dilutions followed by the addition of the appropriate secondary antibody either anti-rabbit HRP-conjugated (Cell Signaling, Cat# 7074), or anti-goat HRP-conjugated antibody. PDVF membranes were imaged on a Chemidoc XRS molecular imager (Bio-Rad) using the SuperSignal West Femto Maximum Sensitivity Substrate kit (ThermoFisher, Cat# 34095).
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3

Detection of NMNAT1 in Differentiated C2C12 Cells

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Whole cell or mitochondrial lysates from differentiated C2C12 cells were prepared with RIPA lysis buffer (50 mM Tris-HCl pH 7.4, 1% NP40, 0.25% sodium deoxycholate, 0.5 mM EDTA, 150 mM sodium chloride) supplemented with protease inhibitor cocktail (Roche). Forty μg of lysate, 20 μg of mitochondrial pellet, or 10 μg of supernatant were run on a 10% gel (Bio-Rad) and transferred to PVDF membrane (Immobilon). The membrane was probed with rabbit polyclonal anti-NMNAT1 (1:500 dilution) as previously described (Zhang et al., 2009 (link)) or anti-VDAC (Abcam) followed by secondary antibody incubation. Immunoblots were developed using SuperSignal West femto kit (Thermo Fisher Scientific) on a Bio-Rad imaging system. Blots were then stripped and re-probed with HRP-conjugated β-actin antibody (Abcam).
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4

Synthesis and Purification of Sialyltransferase and Glycans

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Recombinant rat α-(2,6)-sialyltransferase (ST6Gal1) was prepared as reported.20 (link) CMP-Neu5Ac9N3, 4, and Ac4ManNAz were synthesized as previously described.5g (link),11 (link)Vibrio cholerae neuraminidase was purchased from Sigma-Aldrich (N6514). Arthrobacter ureafaciens neuraminidase was purchase from NEB (P0722). Alkaline phosphatase (FastAP) was purchased from Thermo Scientific (EF0651). HRP conjugated anti-biotin antibody (200-032-211), Alexa Fluor 488 conjugated anti-biotin antibody (200-542-211), and unconjugated anti-biotin antibody (200-002-211) were purchased from Jackson ImmunoResearch Laboratories. HRP conjugated β-actin antibody was from Abcam (ab20272). Anti-CI-MPR (IGF2R) polyclonal antibody was a kind gift of Dr. Peter Lobel (CABM-Rutgers). Protease inhibitor cocktail tablet (88666), EZ-Link Sulfo-NHS-LC-Biotin (21335), and mass spectrometry compatible silver staining kit (24600) were from Thermo Scientific. Protein G beads were from Sigma-Aldrich (Protein G sepharose, Fast Flow, P3296).
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